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The map label for this gene is yvrE [H]

Identifier: 66045426

GI number: 66045426

Start: 2540031

End: 2540909

Strand: Direct

Name: yvrE [H]

Synonym: Psyr_2186

Alternate gene names: 66045426

Gene position: 2540031-2540909 (Clockwise)

Preceding gene: 66045425

Following gene: 66045427

Centisome position: 41.68

GC content: 61.89

Gene sequence:

>879_bases
ATGCGTATCGAAATCGTTGTCGACGTGAAGACTACGCTGGGCGAAGGCCCGGTCTGGGATGTCGAGCAACAGCGCCTGTA
CTGGATCGACAGCTTCGACGGCCGTGTCCTGCGCTGCACGGACGACGGGCGCGAACTGCGCGCTTGGGAGGTCGGCCAGA
AAATCGGTTCCATGGCCTTGCGCAAGCACGGTGACGCGGCGCTTGTGGCGCTGCAGACGGGCATCTATAACCTCGACCTG
CCGAGCGGCGATCTGGAGCTGATCGTCGACCCTGAGCCCGGTTTGCCGAACAATCGCCTCAATGATGGCAAGGTCGATCG
GCAGGGCCGGTTCATTGTGGGGTCGATGGACACGCAGGAGGATCAGGCCAGCGCGAAGCTGTATCGCCTCGATCCTGACC
TGAGCCTGCACACGCTGGATGAAGGCATCATCGTGTCCAACGGCCCTTGCTGGAGTCCGGGCGGAGAAACCTTTTATTTC
GCCGACACCTGGTCCGGGGAGATCTGGACCTACGATTACGACAACGCCAGCGGCGCAGTCGCCAACAGAAGCACCTTTGC
CAAAGTCGACACCTCAGCGGGAGGCGCGGCGGATGGCTGCACCGTGGATGACGAAGGCTGTCTGTGGCAAGCGCTGGTGT
ATGCCGGAAAACTGGTGCGTTACACCCCCGACGGCCAGGTGGATCGCATCATTGACATGCCCGTAAAGAAAGTGACCAGT
CTGACCTTCGGCGGCCCGAATCTGGACACACTGTTCGTCACCTCCATGGCCAAGCCGCCGTTGGCGCGCTTTCCTGACGA
TGGCCAGCAGCGCGGTGCCTTGTTCGCCATCACCGGGCTGGGTGTGAAAGGCATCGCCGAGCGGCGCTTTGCCAGTTAA

Upstream 100 bases:

>100_bases
CGAAGCCCGTGAAATGCTCGATCTGAAGGGGCAGGACAAGGTTGATTTCTAGTCGCCGCAAAATGTGTCATCTCAATAAC
AACAAGACAGAGGTGAAAAA

Downstream 100 bases:

>100_bases
CCCTTCTACAGACCGACCCTGAACGTTAAGGACGACTGAACCCTTTCTCGCTGGGGCGTGTGCGGCACGCCTGGAGATTT
CCCATGCCAAATAACAAAAA

Product: senescence marker protein-30 (SMP-30)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MRIEIVVDVKTTLGEGPVWDVEQQRLYWIDSFDGRVLRCTDDGRELRAWEVGQKIGSMALRKHGDAALVALQTGIYNLDL
PSGDLELIVDPEPGLPNNRLNDGKVDRQGRFIVGSMDTQEDQASAKLYRLDPDLSLHTLDEGIIVSNGPCWSPGGETFYF
ADTWSGEIWTYDYDNASGAVANRSTFAKVDTSAGGAADGCTVDDEGCLWQALVYAGKLVRYTPDGQVDRIIDMPVKKVTS
LTFGGPNLDTLFVTSMAKPPLARFPDDGQQRGALFAITGLGVKGIAERRFAS

Sequences:

>Translated_292_residues
MRIEIVVDVKTTLGEGPVWDVEQQRLYWIDSFDGRVLRCTDDGRELRAWEVGQKIGSMALRKHGDAALVALQTGIYNLDL
PSGDLELIVDPEPGLPNNRLNDGKVDRQGRFIVGSMDTQEDQASAKLYRLDPDLSLHTLDEGIIVSNGPCWSPGGETFYF
ADTWSGEIWTYDYDNASGAVANRSTFAKVDTSAGGAADGCTVDDEGCLWQALVYAGKLVRYTPDGQVDRIIDMPVKKVTS
LTFGGPNLDTLFVTSMAKPPLARFPDDGQQRGALFAITGLGVKGIAERRFAS
>Mature_292_residues
MRIEIVVDVKTTLGEGPVWDVEQQRLYWIDSFDGRVLRCTDDGRELRAWEVGQKIGSMALRKHGDAALVALQTGIYNLDL
PSGDLELIVDPEPGLPNNRLNDGKVDRQGRFIVGSMDTQEDQASAKLYRLDPDLSLHTLDEGIIVSNGPCWSPGGETFYF
ADTWSGEIWTYDYDNASGAVANRSTFAKVDTSAGGAADGCTVDDEGCLWQALVYAGKLVRYTPDGQVDRIIDMPVKKVTS
LTFGGPNLDTLFVTSMAKPPLARFPDDGQQRGALFAITGLGVKGIAERRFAS

Specific function: Unknown

COG id: COG3386

COG function: function code G; Gluconolactonase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SMP-30/CGR1 family [H]

Homologues:

Organism=Homo sapiens, GI23111021, Length=301, Percent_Identity=30.8970099667774, Blast_Score=139, Evalue=4e-33,
Organism=Homo sapiens, GI4759036, Length=301, Percent_Identity=30.8970099667774, Blast_Score=139, Evalue=4e-33,
Organism=Drosophila melanogaster, GI24646912, Length=300, Percent_Identity=32.3333333333333, Blast_Score=132, Evalue=3e-31,
Organism=Drosophila melanogaster, GI24646910, Length=300, Percent_Identity=32.3333333333333, Blast_Score=132, Evalue=3e-31,
Organism=Drosophila melanogaster, GI24641471, Length=298, Percent_Identity=31.2080536912752, Blast_Score=130, Evalue=1e-30,
Organism=Drosophila melanogaster, GI18860103, Length=298, Percent_Identity=31.2080536912752, Blast_Score=130, Evalue=1e-30,
Organism=Drosophila melanogaster, GI24641469, Length=298, Percent_Identity=31.2080536912752, Blast_Score=130, Evalue=1e-30,
Organism=Drosophila melanogaster, GI45551448, Length=298, Percent_Identity=31.2080536912752, Blast_Score=130, Evalue=1e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR013658
- InterPro:   IPR005511 [H]

Pfam domain/function: PF08450 SGL [H]

EC number: NA

Molecular weight: Translated: 31883; Mature: 31883

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIEIVVDVKTTLGEGPVWDVEQQRLYWIDSFDGRVLRCTDDGRELRAWEVGQKIGSMAL
CEEEEEEEEHHHCCCCCEECCCCCEEEEEECCCCCEEEECCCCCEEHHHHHHHHHHHHHH
RKHGDAALVALQTGIYNLDLPSGDLELIVDPEPGLPNNRLNDGKVDRQGRFIVGSMDTQE
HCCCCEEEEEEECCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
DQASAKLYRLDPDLSLHTLDEGIIVSNGPCWSPGGETFYFADTWSGEIWTYDYDNASGAV
CCCCCEEEEECCCCEEEEECCCEEEECCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCE
ANRSTFAKVDTSAGGAADGCTVDDEGCLWQALVYAGKLVRYTPDGQVDRIIDMPVKKVTS
ECCCEEEEEECCCCCCCCCCEECCCCHHHHHHHHHCEEEEECCCCCCCCEECCCHHHHHE
LTFGGPNLDTLFVTSMAKPPLARFPDDGQQRGALFAITGLGVKGIAERRFAS
EECCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHCCC
>Mature Secondary Structure
MRIEIVVDVKTTLGEGPVWDVEQQRLYWIDSFDGRVLRCTDDGRELRAWEVGQKIGSMAL
CEEEEEEEEHHHCCCCCEECCCCCEEEEEECCCCCEEEECCCCCEEHHHHHHHHHHHHHH
RKHGDAALVALQTGIYNLDLPSGDLELIVDPEPGLPNNRLNDGKVDRQGRFIVGSMDTQE
HCCCCEEEEEEECCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
DQASAKLYRLDPDLSLHTLDEGIIVSNGPCWSPGGETFYFADTWSGEIWTYDYDNASGAV
CCCCCEEEEECCCCEEEEECCCEEEECCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCE
ANRSTFAKVDTSAGGAADGCTVDDEGCLWQALVYAGKLVRYTPDGQVDRIIDMPVKKVTS
ECCCEEEEEECCCCCCCCCCEECCCCHHHHHHHHHCEEEEECCCCCCCCEECCCHHHHHE
LTFGGPNLDTLFVTSMAKPPLARFPDDGQQRGALFAITGLGVKGIAERRFAS
EECCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]