| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045425
Identifier: 66045425
GI number: 66045425
Start: 2539050
End: 2539982
Strand: Direct
Name: 66045425
Synonym: Psyr_2185
Alternate gene names: NA
Gene position: 2539050-2539982 (Clockwise)
Preceding gene: 66045424
Following gene: 66045426
Centisome position: 41.67
GC content: 60.56
Gene sequence:
>933_bases ATGCCCAAAAAACGTCCGGTCATCATTACCTGCGCCGTAACGGGTGCAATTCACACGCCGTCGATGTCGCCTCATTTGCC GATCACGCCGCAGGAAATCGCCGATGCAGCCATCGGTGCCGCCGAGGCCGGGGCCTCGATCGTTCATTTGCACGCCCGCG ACCCGCAGGACGGAAGGCCCAGTCAGGATGTCGACCTGTTTCGGCAGTTCCTGCCGCAGATCAAGGCCAAGAGCGACGTG GTGATCAATATCACCACGGGCGGCGCGCCGACCATGGGCGTGGAAGAGCGCTTGCAACCGGTCGCGCAGCTCAAGCCGGA ACTCGCCTCGCTGAACATGGGATCAATGAACTTCGGTCTGTATGAAATGCTGGATCGCTACAGCGAGTTCAAGCACGACT GGGAGCGGCCCTATCTGGCCGAGAGCGACGACCGGATTTTCCGCAACACCTTCCGCGACATCGCGCACATTCTCAATACC TGTGCCGAGAACCGTACACGCTTTGAAATTGAATGCTATGACATCGGCCATCTGTATACCGCAGCACACTTCCTGCAGCG TGGGTTGCTCAAGGCGCCGATTTTCATCCAGTCTGTATTCGGTTTGCGCGGCGGGATCGGCGGACACCCTGAAGACCTTG CGCACATGCGCCGTACGGCTGACCGCCTGTTTGGCGATGCCTATCAGTGGTCGATCCTGGGGGCCGGTCGCAATCAGATT CCGCTGGGCACCATGGGCCTGTCGATGGGCAGCCATGTACGGGTCGGTCTGGAGGATTCGCTGTGGGACGGGCCGGGCAA ACTGGCGGCGTCCAATGCCGATCAGGTCAAGCGTATCCGCACGGTGATCGAAGCGCTGGGCGGGCAGGTGGCAACGCCGG ACGAAGCCCGTGAAATGCTCGATCTGAAGGGGCAGGACAAGGTTGATTTCTAG
Upstream 100 bases:
>100_bases AGTACCTCTGAGGATTCGCCCGATAGCAACGATGACCGGACCTCGTCCGAGTCATGTTCCACATCAGACTTCTCGCCAAC AACAAGAATGGAGAATGCTC
Downstream 100 bases:
>100_bases TCGCCGCAAAATGTGTCATCTCAATAACAACAAGACAGAGGTGAAAAAATGCGTATCGAAATCGTTGTCGACGTGAAGAC TACGCTGGGCGAAGGCCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MPKKRPVIITCAVTGAIHTPSMSPHLPITPQEIADAAIGAAEAGASIVHLHARDPQDGRPSQDVDLFRQFLPQIKAKSDV VINITTGGAPTMGVEERLQPVAQLKPELASLNMGSMNFGLYEMLDRYSEFKHDWERPYLAESDDRIFRNTFRDIAHILNT CAENRTRFEIECYDIGHLYTAAHFLQRGLLKAPIFIQSVFGLRGGIGGHPEDLAHMRRTADRLFGDAYQWSILGAGRNQI PLGTMGLSMGSHVRVGLEDSLWDGPGKLAASNADQVKRIRTVIEALGGQVATPDEAREMLDLKGQDKVDF
Sequences:
>Translated_310_residues MPKKRPVIITCAVTGAIHTPSMSPHLPITPQEIADAAIGAAEAGASIVHLHARDPQDGRPSQDVDLFRQFLPQIKAKSDV VINITTGGAPTMGVEERLQPVAQLKPELASLNMGSMNFGLYEMLDRYSEFKHDWERPYLAESDDRIFRNTFRDIAHILNT CAENRTRFEIECYDIGHLYTAAHFLQRGLLKAPIFIQSVFGLRGGIGGHPEDLAHMRRTADRLFGDAYQWSILGAGRNQI PLGTMGLSMGSHVRVGLEDSLWDGPGKLAASNADQVKRIRTVIEALGGQVATPDEAREMLDLKGQDKVDF >Mature_309_residues PKKRPVIITCAVTGAIHTPSMSPHLPITPQEIADAAIGAAEAGASIVHLHARDPQDGRPSQDVDLFRQFLPQIKAKSDVV INITTGGAPTMGVEERLQPVAQLKPELASLNMGSMNFGLYEMLDRYSEFKHDWERPYLAESDDRIFRNTFRDIAHILNTC AENRTRFEIECYDIGHLYTAAHFLQRGLLKAPIFIQSVFGLRGGIGGHPEDLAHMRRTADRLFGDAYQWSILGAGRNQIP LGTMGLSMGSHVRVGLEDSLWDGPGKLAASNADQVKRIRTVIEALGGQVATPDEAREMLDLKGQDKVDF
Specific function: Unknown
COG id: COG3246
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34177; Mature: 34046
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKKRPVIITCAVTGAIHTPSMSPHLPITPQEIADAAIGAAEAGASIVHLHARDPQDGRP CCCCCCEEEEEEEECCEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCC SQDVDLFRQFLPQIKAKSDVVINITTGGAPTMGVEERLQPVAQLKPELASLNMGSMNFGL CHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCHHHHHCCCCCCCCCH YEMLDRYSEFKHDWERPYLAESDDRIFRNTFRDIAHILNTCAENRTRFEIECYDIGHLYT HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECHHHHH AAHFLQRGLLKAPIFIQSVFGLRGGIGGHPEDLAHMRRTADRLFGDAYQWSILGAGRNQI HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC PLGTMGLSMGSHVRVGLEDSLWDGPGKLAASNADQVKRIRTVIEALGGQVATPDEAREML CCHHHCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH DLKGQDKVDF HCCCCCCCCC >Mature Secondary Structure PKKRPVIITCAVTGAIHTPSMSPHLPITPQEIADAAIGAAEAGASIVHLHARDPQDGRP CCCCCEEEEEEEECCEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCC SQDVDLFRQFLPQIKAKSDVVINITTGGAPTMGVEERLQPVAQLKPELASLNMGSMNFGL CHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCHHHHHCCCCCCCCCH YEMLDRYSEFKHDWERPYLAESDDRIFRNTFRDIAHILNTCAENRTRFEIECYDIGHLYT HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECHHHHH AAHFLQRGLLKAPIFIQSVFGLRGGIGGHPEDLAHMRRTADRLFGDAYQWSILGAGRNQI HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC PLGTMGLSMGSHVRVGLEDSLWDGPGKLAASNADQVKRIRTVIEALGGQVATPDEAREML CCHHHCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH DLKGQDKVDF HCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA