Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
---|---|
Accession | NC_007005 |
Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is tesB [C]
Identifier: 66045297
GI number: 66045297
Start: 2404082
End: 2404879
Strand: Direct
Name: tesB [C]
Synonym: Psyr_2057
Alternate gene names: 66045297
Gene position: 2404082-2404879 (Clockwise)
Preceding gene: 66045296
Following gene: 66045301
Centisome position: 39.45
GC content: 64.04
Gene sequence:
>798_bases ATGACCTTTTCTGAACTGATCGATGCGCTGCGTCGCGATCCGCGCTCTGTCACGATCCCTGCCGAATGGTCTCAAGGGCG TGCCTGCTTCGGCGGGCTGATGGCTGCGCTGACCTACGAAGCGATGCGTGCACAGGTGCCGGAAGGGCGGCCGGTTCGTT CGTTGGCGATCACCTTTGTCGGGCCGGCCGCGCCCGGTGTGCCGATTGCTTTCGAGGTCGACACCCTGCGCCATGGCAAG GCAGTCAGTCAGGTGCTGGGACGCGCCATGCAGAACGGTCAGGTCATGACCCTGATACAAGGCAGCTTCGGTGCCCCTCG GGAATCGATGATCACCGTTGCCGCAGAGGCCGCGCCGGTCCTTAAACCGGTTGATCAATGTCCGGAGCTGCCGTTCGCCA GCGGCGTGATGCCTGATTACCTGCGCTTCATGGACATCCGCTGGGCGTTGGGCGGCATGCCATTCAGTAATACCCGATCA CCGGCGATTGGCGGCTACGTGCGCTTTCGCGATACGCCGCACGCCACGCCCATGAGCGAAGCGCACATTCTGGCGCTGGT GGACACCTGGCCGCCTGCGGTACTGCCGCACCTGGACAAACCGGCCCCCGGCAGCTCACTGACCTGGACCATTGAGTTCG TCCAGCCCCAGCCGTCGCTCGATACCCTGCAGTGGTGCAGCTACCGCGCAGTCATCGAGCATGCCCGCGATGGCTATGGC CATACCGCCGCGGCATTGTGGAGCCCCGACGGCGAGCTGATCGCAATCAGCCGCCAGACGGTTACCGTATTTGGCTGA
Upstream 100 bases:
>100_bases GCAGGTCATTCAGGCCGCAAAAATGGCTATTATGCGGCCTGTCGTTAACTAAGAGGATGGTTATCATCCATTCACTTGTG TGTTGACGTGTGGAGTGAGC
Downstream 100 bases:
>100_bases CCGGCAACCGGATCAAGGTTTGCGAGCGGCCCGGGCGGCGTCCTGGCGCTGAAACCCCAGCGCCGCCACCAGGCCGATCA CGCCGATGGCAACCGATGAA
Product: acyl-CoA thioesterase II, putative
Products: Hydrolyzed acyl-CoA thioesters [C]
Alternate protein names: TesB-Like Acyl-CoA Thioesterase; TesB Family Acyl-CoA Thioesterase; Acyl-CoA Thioesterase; Thioesterase-Like Protein; Thioesterase Superfamily Protein; Acyl-CoA Thioesterase TesB Family Protein; Acyl-CoA Thioesterase-Like Protein
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MTFSELIDALRRDPRSVTIPAEWSQGRACFGGLMAALTYEAMRAQVPEGRPVRSLAITFVGPAAPGVPIAFEVDTLRHGK AVSQVLGRAMQNGQVMTLIQGSFGAPRESMITVAAEAAPVLKPVDQCPELPFASGVMPDYLRFMDIRWALGGMPFSNTRS PAIGGYVRFRDTPHATPMSEAHILALVDTWPPAVLPHLDKPAPGSSLTWTIEFVQPQPSLDTLQWCSYRAVIEHARDGYG HTAAALWSPDGELIAISRQTVTVFG
Sequences:
>Translated_265_residues MTFSELIDALRRDPRSVTIPAEWSQGRACFGGLMAALTYEAMRAQVPEGRPVRSLAITFVGPAAPGVPIAFEVDTLRHGK AVSQVLGRAMQNGQVMTLIQGSFGAPRESMITVAAEAAPVLKPVDQCPELPFASGVMPDYLRFMDIRWALGGMPFSNTRS PAIGGYVRFRDTPHATPMSEAHILALVDTWPPAVLPHLDKPAPGSSLTWTIEFVQPQPSLDTLQWCSYRAVIEHARDGYG HTAAALWSPDGELIAISRQTVTVFG >Mature_264_residues TFSELIDALRRDPRSVTIPAEWSQGRACFGGLMAALTYEAMRAQVPEGRPVRSLAITFVGPAAPGVPIAFEVDTLRHGKA VSQVLGRAMQNGQVMTLIQGSFGAPRESMITVAAEAAPVLKPVDQCPELPFASGVMPDYLRFMDIRWALGGMPFSNTRSP AIGGYVRFRDTPHATPMSEAHILALVDTWPPAVLPHLDKPAPGSSLTWTIEFVQPQPSLDTLQWCSYRAVIEHARDGYGH TAAALWSPDGELIAISRQTVTVFG
Specific function: Can Hydrolyze A Broad Range Of Acyl-CoA Thioesters. Its Physiological Function Is Not Known. [C]
COG id: COG1946
COG function: function code I; Acyl-CoA thioesterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.2.- [C]
Molecular weight: Translated: 28708; Mature: 28577
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFSELIDALRRDPRSVTIPAEWSQGRACFGGLMAALTYEAMRAQVPEGRPVRSLAITFV CCHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEE GPAAPGVPIAFEVDTLRHGKAVSQVLGRAMQNGQVMTLIQGSFGAPRESMITVAAEAAPV CCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHEEEEEHHHCHH LKPVDQCPELPFASGVMPDYLRFMDIRWALGGMPFSNTRSPAIGGYVRFRDTPHATPMSE HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCC AHILALVDTWPPAVLPHLDKPAPGSSLTWTIEFVQPQPSLDTLQWCSYRAVIEHARDGYG CEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCC HTAAALWSPDGELIAISRQTVTVFG CEEEEEECCCCCEEEEEEEEEEEEC >Mature Secondary Structure TFSELIDALRRDPRSVTIPAEWSQGRACFGGLMAALTYEAMRAQVPEGRPVRSLAITFV CHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEE GPAAPGVPIAFEVDTLRHGKAVSQVLGRAMQNGQVMTLIQGSFGAPRESMITVAAEAAPV CCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHEEEEEHHHCHH LKPVDQCPELPFASGVMPDYLRFMDIRWALGGMPFSNTRSPAIGGYVRFRDTPHATPMSE HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCC AHILALVDTWPPAVLPHLDKPAPGSSLTWTIEFVQPQPSLDTLQWCSYRAVIEHARDGYG CEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCC HTAAALWSPDGELIAISRQTVTVFG CEEEEEECCCCCEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: acyl-CoA thioesters [C]
Specific reaction: Hydrolyzes a broad range of acyl-CoA thioesters [C]
General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA