Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is 66045267
Identifier: 66045267
GI number: 66045267
Start: 2351440
End: 2352294
Strand: Direct
Name: 66045267
Synonym: Psyr_2027
Alternate gene names: NA
Gene position: 2351440-2352294 (Clockwise)
Preceding gene: 66045266
Following gene: 66045268
Centisome position: 38.59
GC content: 62.81
Gene sequence:
>855_bases GTGACGTTTAGCGTGGAGGAAGTGCGTTTCAATCTGGGGCATATCGAACTGGCTGCCCATCTTTACGGCCCCGAGGACGG CCGGCCGGTGATTGCCGTGCACGGCTGGCTCGACAATGCCAACAGCTTTGCCCGCCTGGCGCCGCAACTGGATGGCCTGC GCATCGTGGCGCTCGATCTGGCCGGGCATGGTCATTCAGCGCATAGGCCTGCCGGGGCGTCCTATGCGCTGGCCGACTAC GTGTTCGACGTGCTGCAGGTCGCCGAGCAATTGGGCTGGCAGCGCTTTGCCCTGATGGGCCATTCACTGGGCGCGATCAT TTCGGTATTGCTGGCCGGGTCGTTGCCGGAGCGTGTCACGCGGCTGGCACTGATCGACGGTTTGATTCCCTTGACCGGCG ACCCCGAATCCGCCGCCGAGCGGATGGGCTCCGCGCTGCAGGCGCAGCTCAGGCTGTCGGGCAAGAAAAAGCCGGTTTAC GAGGATCAGCAACGCGCTGTTCAGGCGCGTATGAAAGGCGTCGTCCCGGTCAGTCGCGAGGCTGCCGAATTACTCGCGCA ACGCGGCCTGATGCCGGTACCCGGCGGCTATACCTGGCGCAGCGACAGCCGCCTGACGCTGCCATCTGCGATACGTCTTA CACATCAGCAGGCGATGTCTTTCGTCAACGCTATCCGTTGCCCGACGCAACTGCTGGTCGCTACAGGCGGCATGCTGACG AAAAATCAGCTCATGCTGTCCGGGCTGCCTTTCGACGTCGTGCAGCTTGAAGGCGGTCATCATCTGCACCTGGACGACGA GCAGGGCGCGAGCGCTGTTGCACACTGTATCAATCGCTTCTTCGCTGCTTCTTGA
Upstream 100 bases:
>100_bases GAGGGCACATGTTTCCCCTTGAACGACCGGATGAAACCGCATGGCTGCTCAAAACGCTGCTGGCTCGCTGGGACGCGCGT AGCGCCTCAAGGTTGACGGC
Downstream 100 bases:
>100_bases CTTGAGCCCGGCAACTGCCGACGCTGGGCGGGTTGAAACAGGAGTCAACCGTGATGGATCAATCCGCAGCCTCTGGTGAC CGCCTCGCTGGCGATCTTTT
Product: Alpha/beta hydrolase fold
Products: NA
Alternate protein names: Atropine acylhydrolase; Atropinesterase [H]
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MTFSVEEVRFNLGHIELAAHLYGPEDGRPVIAVHGWLDNANSFARLAPQLDGLRIVALDLAGHGHSAHRPAGASYALADY VFDVLQVAEQLGWQRFALMGHSLGAIISVLLAGSLPERVTRLALIDGLIPLTGDPESAAERMGSALQAQLRLSGKKKPVY EDQQRAVQARMKGVVPVSREAAELLAQRGLMPVPGGYTWRSDSRLTLPSAIRLTHQQAMSFVNAIRCPTQLLVATGGMLT KNQLMLSGLPFDVVQLEGGHHLHLDDEQGASAVAHCINRFFAAS
Sequences:
>Translated_284_residues MTFSVEEVRFNLGHIELAAHLYGPEDGRPVIAVHGWLDNANSFARLAPQLDGLRIVALDLAGHGHSAHRPAGASYALADY VFDVLQVAEQLGWQRFALMGHSLGAIISVLLAGSLPERVTRLALIDGLIPLTGDPESAAERMGSALQAQLRLSGKKKPVY EDQQRAVQARMKGVVPVSREAAELLAQRGLMPVPGGYTWRSDSRLTLPSAIRLTHQQAMSFVNAIRCPTQLLVATGGMLT KNQLMLSGLPFDVVQLEGGHHLHLDDEQGASAVAHCINRFFAAS >Mature_283_residues TFSVEEVRFNLGHIELAAHLYGPEDGRPVIAVHGWLDNANSFARLAPQLDGLRIVALDLAGHGHSAHRPAGASYALADYV FDVLQVAEQLGWQRFALMGHSLGAIISVLLAGSLPERVTRLALIDGLIPLTGDPESAAERMGSALQAQLRLSGKKKPVYE DQQRAVQARMKGVVPVSREAAELLAQRGLMPVPGGYTWRSDSRLTLPSAIRLTHQQAMSFVNAIRCPTQLLVATGGMLTK NQLMLSGLPFDVVQLEGGHHLHLDDEQGASAVAHCINRFFAAS
Specific function: Alkaloid degradation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dmpD/todF/xylF esterase family [H]
Homologues:
Organism=Homo sapiens, GI18777795, Length=282, Percent_Identity=29.4326241134752, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI24667999, Length=292, Percent_Identity=30.4794520547945, Blast_Score=125, Evalue=3e-29, Organism=Drosophila melanogaster, GI21357291, Length=286, Percent_Identity=27.2727272727273, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI24667992, Length=286, Percent_Identity=27.2727272727273, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI24655874, Length=273, Percent_Identity=31.5018315018315, Blast_Score=119, Evalue=2e-27, Organism=Drosophila melanogaster, GI21356953, Length=282, Percent_Identity=29.7872340425532, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI17137390, Length=279, Percent_Identity=30.1075268817204, Blast_Score=112, Evalue=4e-25, Organism=Drosophila melanogaster, GI24655886, Length=119, Percent_Identity=42.8571428571429, Blast_Score=105, Evalue=4e-23, Organism=Drosophila melanogaster, GI21356937, Length=294, Percent_Identity=25.8503401360544, Blast_Score=97, Evalue=9e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.10 [H]
Molecular weight: Translated: 30643; Mature: 30511
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFSVEEVRFNLGHIELAAHLYGPEDGRPVIAVHGWLDNANSFARLAPQLDGLRIVALDL CCCCHHHHHHCCCCEEEEEEECCCCCCCEEEEEECCCCCCCHHHHHCCCCCCEEEEEEEE AGHGHSAHRPAGASYALADYVFDVLQVAEQLGWQRFALMGHSLGAIISVLLAGSLPERVT CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHH RLALIDGLIPLTGDPESAAERMGSALQAQLRLSGKKKPVYEDQQRAVQARMKGVVPVSRE HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHH AAELLAQRGLMPVPGGYTWRSDSRLTLPSAIRLTHQQAMSFVNAIRCPTQLLVATGGMLT HHHHHHHCCCCCCCCCCEECCCCCEECHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEE KNQLMLSGLPFDVVQLEGGHHLHLDDEQGASAVAHCINRFFAAS CCCCEECCCCEEEEEECCCCEEECCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure TFSVEEVRFNLGHIELAAHLYGPEDGRPVIAVHGWLDNANSFARLAPQLDGLRIVALDL CCCHHHHHHCCCCEEEEEEECCCCCCCEEEEEECCCCCCCHHHHHCCCCCCEEEEEEEE AGHGHSAHRPAGASYALADYVFDVLQVAEQLGWQRFALMGHSLGAIISVLLAGSLPERVT CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHH RLALIDGLIPLTGDPESAAERMGSALQAQLRLSGKKKPVYEDQQRAVQARMKGVVPVSRE HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHH AAELLAQRGLMPVPGGYTWRSDSRLTLPSAIRLTHQQAMSFVNAIRCPTQLLVATGGMLT HHHHHHHCCCCCCCCCCEECCCCCEECHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEE KNQLMLSGLPFDVVQLEGGHHLHLDDEQGASAVAHCINRFFAAS CCCCEECCCCEEEEEECCCCEEECCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA