Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
---|---|
Accession | NC_007005 |
Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is 66045268
Identifier: 66045268
GI number: 66045268
Start: 2352422
End: 2353252
Strand: Direct
Name: 66045268
Synonym: Psyr_2028
Alternate gene names: NA
Gene position: 2352422-2353252 (Clockwise)
Preceding gene: 66045267
Following gene: 66045269
Centisome position: 38.6
GC content: 63.42
Gene sequence:
>831_bases ATGAGAGCACTCATGCGTTTATCAAGTGTTCCCGTTGTCGCCTTGTGCCTGTCGATGTTCAGCGCTGTGCTGTGCGCCGC CGATGTAACAGGCAGCCGCGATCTGCAGATTCTGCCGCGTCTGGCCGACACGGAAATCGTCGATTATCGTCCGGCTGCCG AGCTCGAGCGGGTCTACCCGATGGGCTCGATCCGCAAGATCAGCGGCCAGTTGCGTTTCGACGGGCAGGTCAGTGCGCGC GGCAATCTGACGTCTGTCACCTATCAATTACCTGCCGAGCGCACTGCCGACGACGCTTTCACTGCGGCGCGCGAAGCCTT GCAGCAGCAGGGTGCCGAGCTGCTGTTCTGGTGTCAGGCGCGCGACTGCGGAGAAAGCAGCCTGTGGGCCAACGAAGTGT TCGGCAACGCCAAACTGTATGGCGCGGATGATCGCCAGGCTTACCTGCTGCTGCGTCTGGCAGAACCGCGCAATGACACG CTGGTAGCGCTTTACAGCATCACCCGTGGCAACCGCCGTGCCTACCTGCACGTCGAGCAGTTTGAATCCGCTGCGCCACT GGGCGAACTGCTGCCGACCTCGGCCACCTTGCTGCGCCAATTGCGAAGCACCGGCACGCTGGAACTTCCGCGCCTGGGCG GCGAGCCACAGGATGCCTGGGTTACTCTGGTTTCCCGCGCCCTTAACCAGGACAGTGGCCTGCGCGCCACGGTGTCCGGA CCCAGTGCCGGCGCCTGGCTTGACGCCCTGATCACCAAAGGCGTTCGCGCTGCCCGGCTCGAGGCTGGCGTCACTGAAGG CAAGGGGCTCAAGATCGAGGTTATCCGCTAG
Upstream 100 bases:
>100_bases GCGGGTTGAAACAGGAGTCAACCGTGATGGATCAATCCGCAGCCTCTGGTGACCGCCTCGCTGGCGATCTTTTATATTTT CGTTCCCTGCTTGCCTGCCA
Downstream 100 bases:
>100_bases AACAGCGATGGCGGACTGGCAGGTTCGCCATTATGCTCGCTCTCTCCGATCCTTTTTAGTGAATGGCGCATGTTCAACAA TGACCGTCTGTTGGTGCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MRALMRLSSVPVVALCLSMFSAVLCAADVTGSRDLQILPRLADTEIVDYRPAAELERVYPMGSIRKISGQLRFDGQVSAR GNLTSVTYQLPAERTADDAFTAAREALQQQGAELLFWCQARDCGESSLWANEVFGNAKLYGADDRQAYLLLRLAEPRNDT LVALYSITRGNRRAYLHVEQFESAAPLGELLPTSATLLRQLRSTGTLELPRLGGEPQDAWVTLVSRALNQDSGLRATVSG PSAGAWLDALITKGVRAARLEAGVTEGKGLKIEVIR
Sequences:
>Translated_276_residues MRALMRLSSVPVVALCLSMFSAVLCAADVTGSRDLQILPRLADTEIVDYRPAAELERVYPMGSIRKISGQLRFDGQVSAR GNLTSVTYQLPAERTADDAFTAAREALQQQGAELLFWCQARDCGESSLWANEVFGNAKLYGADDRQAYLLLRLAEPRNDT LVALYSITRGNRRAYLHVEQFESAAPLGELLPTSATLLRQLRSTGTLELPRLGGEPQDAWVTLVSRALNQDSGLRATVSG PSAGAWLDALITKGVRAARLEAGVTEGKGLKIEVIR >Mature_276_residues MRALMRLSSVPVVALCLSMFSAVLCAADVTGSRDLQILPRLADTEIVDYRPAAELERVYPMGSIRKISGQLRFDGQVSAR GNLTSVTYQLPAERTADDAFTAAREALQQQGAELLFWCQARDCGESSLWANEVFGNAKLYGADDRQAYLLLRLAEPRNDT LVALYSITRGNRRAYLHVEQFESAAPLGELLPTSATLLRQLRSTGTLELPRLGGEPQDAWVTLVSRALNQDSGLRATVSG PSAGAWLDALITKGVRAARLEAGVTEGKGLKIEVIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30035; Mature: 30035
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRALMRLSSVPVVALCLSMFSAVLCAADVTGSRDLQILPRLADTEIVDYRPAAELERVYP CCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCEEECCCCHHHHHHHCC MGSIRKISGQLRFDGQVSARGNLTSVTYQLPAERTADDAFTAAREALQQQGAELLFWCQA CCCHHHHCCEEEECCEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEEC RDCGESSLWANEVFGNAKLYGADDRQAYLLLRLAEPRNDTLVALYSITRGNRRAYLHVEQ CCCCCCCHHHHHHCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEEECCCCEEEEEHHH FESAAPLGELLPTSATLLRQLRSTGTLELPRLGGEPQDAWVTLVSRALNQDSGLRATVSG HHCCCCHHHHCCCHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEECC PSAGAWLDALITKGVRAARLEAGVTEGKGLKIEVIR CCCHHHHHHHHHCCCHHHHHHCCCCCCCCEEEEEEC >Mature Secondary Structure MRALMRLSSVPVVALCLSMFSAVLCAADVTGSRDLQILPRLADTEIVDYRPAAELERVYP CCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCEEECCCCHHHHHHHCC MGSIRKISGQLRFDGQVSARGNLTSVTYQLPAERTADDAFTAAREALQQQGAELLFWCQA CCCHHHHCCEEEECCEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEEC RDCGESSLWANEVFGNAKLYGADDRQAYLLLRLAEPRNDTLVALYSITRGNRRAYLHVEQ CCCCCCCHHHHHHCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEEECCCCEEEEEHHH FESAAPLGELLPTSATLLRQLRSTGTLELPRLGGEPQDAWVTLVSRALNQDSGLRATVSG HHCCCCHHHHCCCHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEECC PSAGAWLDALITKGVRAARLEAGVTEGKGLKIEVIR CCCHHHHHHHHHCCCHHHHHHCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA