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The map label for this gene is 66044600

Identifier: 66044600

GI number: 66044600

Start: 1533281

End: 1533760

Strand: Direct

Name: 66044600

Synonym: Psyr_1352

Alternate gene names: NA

Gene position: 1533281-1533760 (Clockwise)

Preceding gene: 66044599

Following gene: 66044601

Centisome position: 25.16

GC content: 55.83

Gene sequence:

>480_bases
ATGCTGGCCACCGTACTGGTCGCCAGCCCTGCATTCGCCGACATGAAAATTGCGGTACTGAACTATCAGATGGCCCTGCT
GGAATCGGACGCTGCCAAGCGTTACGCAGTGGACGCCGAGAAGAAGTTCGGCCCGCAACTGACCAAGCTGAAAAGCCTGG
AAAGCAGCGCCAAGGGTATTCAGGATCGTCTGGTCAGCGGTGGCGACAAGATGGCTCAGCCTGAGCGCGAGCGTCTGGAG
CTTGAATTCAAGCAAAAGGCTCGTGATTTCCAGTTCCAGTCCAAGGAACTGAACGAAGCCAAGGCCGTTGCTGACCGCGA
AATGCTCAAGCAGTTGAAGCCGAAGCTGGATCAGGCTGTAGAAGAAGTCATCAAGAAAGGTGGTTTCGACCTGGTCTTCG
AGCGCGGTGCGGTGATCGACGTCAAGCCACAGTATGACGTGACTCGCCAGGTCATCGAGCGCATGAACCAGCTGAAGTAA

Upstream 100 bases:

>100_bases
CTTCCAATTCTCCCTGGGTCAGACCTTCTAAGCGTCTGGTCTTTGATAACGCAACGAATTTTGTAGGAGTTGTATTGTGC
GTAAGTTGACTCAACTGGTA

Downstream 100 bases:

>100_bases
CCATGAGCATAACCATCAAGCTCGGCCAGTTGGCCGAGTTCCTTGGTGCCACGTTACGTGGCGACAAGGATATCGAAATC
ACCGGGCTGGCCACTTTGCA

Product: Outer membrane protein (OmpH-like)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MLATVLVASPAFADMKIAVLNYQMALLESDAAKRYAVDAEKKFGPQLTKLKSLESSAKGIQDRLVSGGDKMAQPERERLE
LEFKQKARDFQFQSKELNEAKAVADREMLKQLKPKLDQAVEEVIKKGGFDLVFERGAVIDVKPQYDVTRQVIERMNQLK

Sequences:

>Translated_159_residues
MLATVLVASPAFADMKIAVLNYQMALLESDAAKRYAVDAEKKFGPQLTKLKSLESSAKGIQDRLVSGGDKMAQPERERLE
LEFKQKARDFQFQSKELNEAKAVADREMLKQLKPKLDQAVEEVIKKGGFDLVFERGAVIDVKPQYDVTRQVIERMNQLK
>Mature_159_residues
MLATVLVASPAFADMKIAVLNYQMALLESDAAKRYAVDAEKKFGPQLTKLKSLESSAKGIQDRLVSGGDKMAQPERERLE
LEFKQKARDFQFQSKELNEAKAVADREMLKQLKPKLDQAVEEVIKKGGFDLVFERGAVIDVKPQYDVTRQVIERMNQLK

Specific function: Unknown

COG id: COG2825

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the skp family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005632 [H]

Pfam domain/function: PF03938 OmpH [H]

EC number: NA

Molecular weight: Translated: 17975; Mature: 17975

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLATVLVASPAFADMKIAVLNYQMALLESDAAKRYAVDAEKKFGPQLTKLKSLESSAKGI
CCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHH
QDRLVSGGDKMAQPERERLELEFKQKARDFQFQSKELNEAKAVADREMLKQLKPKLDQAV
HHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEVIKKGGFDLVFERGAVIDVKPQYDVTRQVIERMNQLK
HHHHHCCCCEEEEECCCEEECCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLATVLVASPAFADMKIAVLNYQMALLESDAAKRYAVDAEKKFGPQLTKLKSLESSAKGI
CCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHH
QDRLVSGGDKMAQPERERLELEFKQKARDFQFQSKELNEAKAVADREMLKQLKPKLDQAV
HHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEVIKKGGFDLVFERGAVIDVKPQYDVTRQVIERMNQLK
HHHHHCCCCEEEEECCCEEECCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]