Click here to switch to the map view.

The map label for this gene is yaeT [H]

Identifier: 66044599

GI number: 66044599

Start: 1530836

End: 1533211

Strand: Direct

Name: yaeT [H]

Synonym: Psyr_1351

Alternate gene names: 66044599

Gene position: 1530836-1533211 (Clockwise)

Preceding gene: 66044598

Following gene: 66044600

Centisome position: 25.12

GC content: 57.24

Gene sequence:

>2376_bases
ATGAAACGTCTGCTGCTAACTGCGGTTCTTTCCGCACTGATGATCGCTGAAGTTCACGCCGAGTCCTTCACCATCTCCGA
TATCCGTGTCAACGGCCTGCAGCGGGTTTCCGCCGGCAGTGTCTTTGGCGCACTGCCGCTGAACGTAGGCGAGCAGGCGG
ACGATGGTCGTTTGGTCGATGCTACCCGTTCGCTGTTTAAAACCGGTTTCTTTCAAGATATCCAGCTGGGTCGCGACGGC
AACGTGCTCGTCATCAACGTCGTCGAGCGCCCTTCGGTTGCGAGTATCGAAATCGAGGGTAACAAGGCCATTTCCACCGA
GGACCTGATGAAGGGGCTGAAACAGTCCGGTCTGGCCGAAGGTGAGATTTTCCAGCGTGCCACCCTCGAAGGCGTGCGTA
ACGAGCTGCAACGTCAATACGTTGCCCAGGGCCGTTACTCTGCCGAGGTTGACGCCGAGGTTGTTCCTCAGCCGCGCAAC
CGCGTAGGCCTGAAGATCAACATCAATGAAGGCACCGTAGCCTCCATTCAGCACATCAACGTGGTGGGTAACAAGGTCTT
CTCCGACGAAGACCTGACCGACCTGTTCGAGCTCAAGACCAGCAACTGGCTGTCGTTCTTCAAGAATGACGACAAGTACG
CCCGTGAAAAGCTGTCGGGTGACCTTGAGCGCCTGCGTTCGTACTACCTCGATCGCGGCTATATCAACATGGATATCGCC
TCGACCCAGGTGTCGATCACGCCCGACAAGAAGAACGTGTACATCACCGTCAACATCAATGAAGGCGAGAAGTACAGCGT
CAAGTCGGTCAAGCTCAGCGGTGACCTGAAGGTCCCTGAAGATCAGGTCAAATCCCTGTTGCTGGTGCAGCCGGGCCAGG
TGTTCTCGCGCAAGGTCATGACCACGACGTCCGAACTGATCACCCGCCGTCTGGGTAACGAAGGCTATACCTTCGCCAAC
GTCAACGGCGTGCCGACACCGAACAACGAAGACCACACGGTCGATATCACCTTCGTCGTCGACCCGGGCAAGCGTGCCTA
CGTCAACCGTATCAACTACCGCGGCAACACCAAGTCGGAAGACGAAGTGCTGCGTCGCGAAATGCGCCAGATGGAAGGCG
GCTGGGCATCGACCTACCTGATCGACCAGTCGAAAACCCGTCTGGACCGTCTGGGCTTCTTCAAGGAAGTCAACGTCGAA
ACGCCACCTGTTCCTGGCACCGACGATCAGGTCGATGTGAACTACGCCGTTGAAGAGCAGGCGTCCGGTTCGATCACCGC
CAGTGTCGGCTTTGCGCAAAGTGCCGGTCTGATCCTTGGTGGTTCGATCAGCCAGAACAACTTCCTGGGTACCGGTAACA
AGGTCAGCATCGGCCTGACCCGCAGCGAATACCAGAGCCGTTACAACTTCAGCTACGTCGATCCGTACTACACGCCGGAC
GGTGTCAGCCTGGGTTACAGCGCGTTCTACCGCACCACCAACTACGATGACCTTGACGTTGATGTTGCAAGCTATGCGGT
TGACAGCCTGGGTGCCGGTATCAACCTTGGCTACCCGATCAGCGAGACCTCGCGCCTGACCTACGGTCTGACCGTGCAGC
AGGACGAGATCAAGACCGGCAAGTACACCGTTGACGAGATTTTCGACTTCGTCGAGAAGGAAGGCGACAAGTACCTGAAC
TTCAAGGGCTCGGTTGGCTGGTCTGAATCGACTCTGAACAAGGGTGTTCTGGCGACCCGTGGTCACTCGCAAAGCCTGGT
GTTCGAATCCACCTTGCCGGGTAGCGACCTGTCGTTCTTCAAGCTGGATTACCGTGCCCAGTACTTCCACCCGATCACTG
ATAACTACACTCTGCGCCTGCACACCGAGCTGGGTTATGGCGACGGCTATGGTTCGACCTCGGGTCTGCCGTTCTACGAG
AACTACTACGCCGGTGGCTTCAACTCGGTACGTGGCTTCAAGGACAGCACCCTTGGTCCGCGCAGTACGCCAAGTAATGG
CTCCAAGCCGGGCACATTGGCGGACCCGGATCAGGATCCACTGCCGTTCGGCGGTAACGCTCTGGTTCAGGGTGGCGTAG
AAGTCATGTTCCCGCTGCCATTCGTCAAGGATCAGCGCTCCTTGCGGACGTCTGTTTTCTGGGACGTGGGTAATGTCTTC
GATACCAAGTGCGACTCGACCAGAACAAGCGCGTCAGGCAAGAAAGTCGAATGCAACGACATCGACCTTTCCGGCATGGC
CAGCTCGGTGGGTATCGGCGTCACCTGGATCACTGCGCTCGGTCCTTTGAGCTTCGCTCTGGCGATGCCGATCAAGAAGC
CGGATGACGAAGCAGAAACTCAGGTCTTCCAATTCTCCCTGGGTCAGACCTTCTAA

Upstream 100 bases:

>100_bases
TGGTCAACGATCTGGGCCGACTGTAAAGCGTTGCCGAGTTGCGAATCTGCCGCATTTTGCGGCAGTTTGTTTATTGCCAG
TTGGAATAAGAAAGGACTTC

Downstream 100 bases:

>100_bases
GCGTCTGGTCTTTGATAACGCAACGAATTTTGTAGGAGTTGTATTGTGCGTAAGTTGACTCAACTGGTAATGCTGGCCAC
CGTACTGGTCGCCAGCCCTG

Product: surface antigen (D15):surface antigen variable number

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 791; Mature: 791

Protein sequence:

>791_residues
MKRLLLTAVLSALMIAEVHAESFTISDIRVNGLQRVSAGSVFGALPLNVGEQADDGRLVDATRSLFKTGFFQDIQLGRDG
NVLVINVVERPSVASIEIEGNKAISTEDLMKGLKQSGLAEGEIFQRATLEGVRNELQRQYVAQGRYSAEVDAEVVPQPRN
RVGLKININEGTVASIQHINVVGNKVFSDEDLTDLFELKTSNWLSFFKNDDKYAREKLSGDLERLRSYYLDRGYINMDIA
STQVSITPDKKNVYITVNINEGEKYSVKSVKLSGDLKVPEDQVKSLLLVQPGQVFSRKVMTTTSELITRRLGNEGYTFAN
VNGVPTPNNEDHTVDITFVVDPGKRAYVNRINYRGNTKSEDEVLRREMRQMEGGWASTYLIDQSKTRLDRLGFFKEVNVE
TPPVPGTDDQVDVNYAVEEQASGSITASVGFAQSAGLILGGSISQNNFLGTGNKVSIGLTRSEYQSRYNFSYVDPYYTPD
GVSLGYSAFYRTTNYDDLDVDVASYAVDSLGAGINLGYPISETSRLTYGLTVQQDEIKTGKYTVDEIFDFVEKEGDKYLN
FKGSVGWSESTLNKGVLATRGHSQSLVFESTLPGSDLSFFKLDYRAQYFHPITDNYTLRLHTELGYGDGYGSTSGLPFYE
NYYAGGFNSVRGFKDSTLGPRSTPSNGSKPGTLADPDQDPLPFGGNALVQGGVEVMFPLPFVKDQRSLRTSVFWDVGNVF
DTKCDSTRTSASGKKVECNDIDLSGMASSVGIGVTWITALGPLSFALAMPIKKPDDEAETQVFQFSLGQTF

Sequences:

>Translated_791_residues
MKRLLLTAVLSALMIAEVHAESFTISDIRVNGLQRVSAGSVFGALPLNVGEQADDGRLVDATRSLFKTGFFQDIQLGRDG
NVLVINVVERPSVASIEIEGNKAISTEDLMKGLKQSGLAEGEIFQRATLEGVRNELQRQYVAQGRYSAEVDAEVVPQPRN
RVGLKININEGTVASIQHINVVGNKVFSDEDLTDLFELKTSNWLSFFKNDDKYAREKLSGDLERLRSYYLDRGYINMDIA
STQVSITPDKKNVYITVNINEGEKYSVKSVKLSGDLKVPEDQVKSLLLVQPGQVFSRKVMTTTSELITRRLGNEGYTFAN
VNGVPTPNNEDHTVDITFVVDPGKRAYVNRINYRGNTKSEDEVLRREMRQMEGGWASTYLIDQSKTRLDRLGFFKEVNVE
TPPVPGTDDQVDVNYAVEEQASGSITASVGFAQSAGLILGGSISQNNFLGTGNKVSIGLTRSEYQSRYNFSYVDPYYTPD
GVSLGYSAFYRTTNYDDLDVDVASYAVDSLGAGINLGYPISETSRLTYGLTVQQDEIKTGKYTVDEIFDFVEKEGDKYLN
FKGSVGWSESTLNKGVLATRGHSQSLVFESTLPGSDLSFFKLDYRAQYFHPITDNYTLRLHTELGYGDGYGSTSGLPFYE
NYYAGGFNSVRGFKDSTLGPRSTPSNGSKPGTLADPDQDPLPFGGNALVQGGVEVMFPLPFVKDQRSLRTSVFWDVGNVF
DTKCDSTRTSASGKKVECNDIDLSGMASSVGIGVTWITALGPLSFALAMPIKKPDDEAETQVFQFSLGQTF
>Mature_791_residues
MKRLLLTAVLSALMIAEVHAESFTISDIRVNGLQRVSAGSVFGALPLNVGEQADDGRLVDATRSLFKTGFFQDIQLGRDG
NVLVINVVERPSVASIEIEGNKAISTEDLMKGLKQSGLAEGEIFQRATLEGVRNELQRQYVAQGRYSAEVDAEVVPQPRN
RVGLKININEGTVASIQHINVVGNKVFSDEDLTDLFELKTSNWLSFFKNDDKYAREKLSGDLERLRSYYLDRGYINMDIA
STQVSITPDKKNVYITVNINEGEKYSVKSVKLSGDLKVPEDQVKSLLLVQPGQVFSRKVMTTTSELITRRLGNEGYTFAN
VNGVPTPNNEDHTVDITFVVDPGKRAYVNRINYRGNTKSEDEVLRREMRQMEGGWASTYLIDQSKTRLDRLGFFKEVNVE
TPPVPGTDDQVDVNYAVEEQASGSITASVGFAQSAGLILGGSISQNNFLGTGNKVSIGLTRSEYQSRYNFSYVDPYYTPD
GVSLGYSAFYRTTNYDDLDVDVASYAVDSLGAGINLGYPISETSRLTYGLTVQQDEIKTGKYTVDEIFDFVEKEGDKYLN
FKGSVGWSESTLNKGVLATRGHSQSLVFESTLPGSDLSFFKLDYRAQYFHPITDNYTLRLHTELGYGDGYGSTSGLPFYE
NYYAGGFNSVRGFKDSTLGPRSTPSNGSKPGTLADPDQDPLPFGGNALVQGGVEVMFPLPFVKDQRSLRTSVFWDVGNVF
DTKCDSTRTSASGKKVECNDIDLSGMASSVGIGVTWITALGPLSFALAMPIKKPDDEAETQVFQFSLGQTF

Specific function: Involved in the assembly of outer membrane proteins. Does not play a direct role in the export of outer membrane lipids [H]

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen D15 family [H]

Homologues:

Organism=Escherichia coli, GI1786374, Length=825, Percent_Identity=38.7878787878788, Blast_Score=564, Evalue=1e-162,

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR016474
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 87065; Mature: 87065

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLLLTAVLSALMIAEVHAESFTISDIRVNGLQRVSAGSVFGALPLNVGEQADDGRLVD
CCHHHHHHHHHHHHHHHHHHCEEEEEEEEECCEEEECCCCEEEEECCCCCCCCCCCEEHH
ATRSLFKTGFFQDIQLGRDGNVLVINVVERPSVASIEIEGNKAISTEDLMKGLKQSGLAE
HHHHHHHHCCHHHEEECCCCCEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHCCCCC
GEIFQRATLEGVRNELQRQYVAQGRYSAEVDAEVVPQPRNRVGLKININEGTVASIQHIN
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCEEEEEECCCCCEEEEEEEE
VVGNKVFSDEDLTDLFELKTSNWLSFFKNDDKYAREKLSGDLERLRSYYLDRGYINMDIA
EECCCEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEE
STQVSITPDKKNVYITVNINEGEKYSVKSVKLSGDLKVPEDQVKSLLLVQPGQVFSRKVM
CEEEEECCCCCEEEEEEEECCCCEEEEEEEEECCCCCCCHHHHCEEEEECCCHHHHHHHH
TTTSELITRRLGNEGYTFANVNGVPTPNNEDHTVDITFVVDPGKRAYVNRINYRGNTKSE
HHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEEEEECCCCEEEEEEEECCCCCCCH
DEVLRREMRQMEGGWASTYLIDQSKTRLDRLGFFKEVNVETPPVPGTDDQVDVNYAVEEQ
HHHHHHHHHHHCCCEEEEEEECCCHHHHHHHCCEEECCCCCCCCCCCCCCEEEEEEECCC
ASGSITASVGFAQSAGLILGGSISQNNFLGTGNKVSIGLTRSEYQSRYNFSYVDPYYTPD
CCCCEEEEECCCCCCCEEEECCCCCCCEECCCCEEEEEEEHHHHHHCCCCEECCCCCCCC
GVSLGYSAFYRTTNYDDLDVDVASYAVDSLGAGINLGYPISETSRLTYGLTVQQDEIKTG
CCCCCCHHEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCC
KYTVDEIFDFVEKEGDKYLNFKGSVGWSESTLNKGVLATRGHSQSLVFESTLPGSDLSFF
CEEHHHHHHHHHHCCCCEEEECCCCCCCHHHCCCCEEEECCCCCEEEEECCCCCCCCEEE
KLDYRAQYFHPITDNYTLRLHTELGYGDGYGSTSGLPFYENYYAGGFNSVRGFKDSTLGP
EEECCEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCC
RSTPSNGSKPGTLADPDQDPLPFGGNALVQGGVEVMFPLPFVKDQRSLRTSVFWDVGNVF
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCEEEEEECCCCCCCHHHHHHHEEECCCHH
DTKCDSTRTSASGKKVECNDIDLSGMASSVGIGVTWITALGPLSFALAMPIKKPDDEAET
CCCCCCCCCCCCCCEEEECCCCCCCCHHHCCCCEEHHHHHHHHHEEEECCCCCCCCHHHH
QVFQFSLGQTF
EEEEEECCCCC
>Mature Secondary Structure
MKRLLLTAVLSALMIAEVHAESFTISDIRVNGLQRVSAGSVFGALPLNVGEQADDGRLVD
CCHHHHHHHHHHHHHHHHHHCEEEEEEEEECCEEEECCCCEEEEECCCCCCCCCCCEEHH
ATRSLFKTGFFQDIQLGRDGNVLVINVVERPSVASIEIEGNKAISTEDLMKGLKQSGLAE
HHHHHHHHCCHHHEEECCCCCEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHCCCCC
GEIFQRATLEGVRNELQRQYVAQGRYSAEVDAEVVPQPRNRVGLKININEGTVASIQHIN
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCEEEEEECCCCCEEEEEEEE
VVGNKVFSDEDLTDLFELKTSNWLSFFKNDDKYAREKLSGDLERLRSYYLDRGYINMDIA
EECCCEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEE
STQVSITPDKKNVYITVNINEGEKYSVKSVKLSGDLKVPEDQVKSLLLVQPGQVFSRKVM
CEEEEECCCCCEEEEEEEECCCCEEEEEEEEECCCCCCCHHHHCEEEEECCCHHHHHHHH
TTTSELITRRLGNEGYTFANVNGVPTPNNEDHTVDITFVVDPGKRAYVNRINYRGNTKSE
HHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEEEEECCCCEEEEEEEECCCCCCCH
DEVLRREMRQMEGGWASTYLIDQSKTRLDRLGFFKEVNVETPPVPGTDDQVDVNYAVEEQ
HHHHHHHHHHHCCCEEEEEEECCCHHHHHHHCCEEECCCCCCCCCCCCCCEEEEEEECCC
ASGSITASVGFAQSAGLILGGSISQNNFLGTGNKVSIGLTRSEYQSRYNFSYVDPYYTPD
CCCCEEEEECCCCCCCEEEECCCCCCCEECCCCEEEEEEEHHHHHHCCCCEECCCCCCCC
GVSLGYSAFYRTTNYDDLDVDVASYAVDSLGAGINLGYPISETSRLTYGLTVQQDEIKTG
CCCCCCHHEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCC
KYTVDEIFDFVEKEGDKYLNFKGSVGWSESTLNKGVLATRGHSQSLVFESTLPGSDLSFF
CEEHHHHHHHHHHCCCCEEEECCCCCCCHHHCCCCEEEECCCCCEEEEECCCCCCCCEEE
KLDYRAQYFHPITDNYTLRLHTELGYGDGYGSTSGLPFYENYYAGGFNSVRGFKDSTLGP
EEECCEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCC
RSTPSNGSKPGTLADPDQDPLPFGGNALVQGGVEVMFPLPFVKDQRSLRTSVFWDVGNVF
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCEEEEEECCCCCCCHHHHHHHEEECCCHH
DTKCDSTRTSASGKKVECNDIDLSGMASSVGIGVTWITALGPLSFALAMPIKKPDDEAET
CCCCCCCCCCCCCCEEEECCCCCCCCHHHCCCCEEHHHHHHHHHEEEECCCCCCCCHHHH
QVFQFSLGQTF
EEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA