Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is cdsA [H]
Identifier: 66044596
GI number: 66044596
Start: 1527289
End: 1528104
Strand: Direct
Name: cdsA [H]
Synonym: Psyr_1348
Alternate gene names: 66044596
Gene position: 1527289-1528104 (Clockwise)
Preceding gene: 66044595
Following gene: 66044597
Centisome position: 25.06
GC content: 60.42
Gene sequence:
>816_bases ATGCTGAAACAACGGATCATCACGGCACTCATTCTGTTGCCGATCGCCTTGTGCGGGTTTTTCCTGCTGACCGGCATGTA CTTCGCCCTGTTCATCGGGGTGGTCGTCGTTCTGGGTGCCTGGGAATGGGCGCGGCTCGCAGGTTTTGCCGCGCAGTTGA TGCGTATCGGCTATGCGGCTGTGGTCGCTGTTCTGCTTTTCCTCATGTACCTGCTGCCAGGGCTGGAGCCCTGGGTGCTG GTTGCTGCCGTCATCTGGTGGGGTGTGGCGACCTTTCTGGTCCTTACCTATCCGGACTCCAGCAGTCACTGGGCAAGTGC AGCGTGCAAGCTGGTCATCGGCCTTCTGATTCTGCTGCCTGCATGGCAGGGTCTGGTCCTGATCAAGCAGTGGCCACTGG GTAACTGGCTGATTCTGTCGGTGATGGTGCTGGTCTGGGCCGCCGACATCGGCGCTTATTTTTCCGGCAAGGCTTTTGGC AAGCGCAAGCTGGCGCCCAAGGTGAGCCCTGGCAAGAGCTGGGAGGGCGTATATGGCGGTCTGGTGGTCAGTCTGGGCAT CACCGCAGCAGTAGGTTTTTCCCGCGACTGGACGGTTGCGCAGTTCATCGCGGCGCTCTTTGGTGCGGCGGTGATCGTAT TCATCTCGGTGATTGGCGACCTGACCGAAAGCATGTTCAAGCGCCAGTCCGGGGTCAAGGACAGCAGCAATCTGCTGCCT GGACACGGCGGGGTACTGGACCGCATCGACAGCCTGACGGCGGCCATTCCGGTATTTGCCGTTCTGCTCTGGGCCGCTGA CTGGGGTGTCATGTGA
Upstream 100 bases:
>100_bases TCAAACACGATGCCATGCGCGCCGCGCTGGCAGATTTCGCTTCTCGCCAACGTCGCTTCGGTAAAACCAGCGAACAGGTA GAAGCTGGAGCCCGGGCTTA
Downstream 100 bases:
>100_bases GTGGTCCGCAACAAATCTCCATTCTGGGCGCAACCGGTTCCATAGGGCTGAGCACTCTGGACGTGGTTGCCCGTCATCCA GCGCTTTATCAAGTGTTCGC
Product: phosphatidate cytidylyltransferase
Products: NA
Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MLKQRIITALILLPIALCGFFLLTGMYFALFIGVVVVLGAWEWARLAGFAAQLMRIGYAAVVAVLLFLMYLLPGLEPWVL VAAVIWWGVATFLVLTYPDSSSHWASAACKLVIGLLILLPAWQGLVLIKQWPLGNWLILSVMVLVWAADIGAYFSGKAFG KRKLAPKVSPGKSWEGVYGGLVVSLGITAAVGFSRDWTVAQFIAALFGAAVIVFISVIGDLTESMFKRQSGVKDSSNLLP GHGGVLDRIDSLTAAIPVFAVLLWAADWGVM
Sequences:
>Translated_271_residues MLKQRIITALILLPIALCGFFLLTGMYFALFIGVVVVLGAWEWARLAGFAAQLMRIGYAAVVAVLLFLMYLLPGLEPWVL VAAVIWWGVATFLVLTYPDSSSHWASAACKLVIGLLILLPAWQGLVLIKQWPLGNWLILSVMVLVWAADIGAYFSGKAFG KRKLAPKVSPGKSWEGVYGGLVVSLGITAAVGFSRDWTVAQFIAALFGAAVIVFISVIGDLTESMFKRQSGVKDSSNLLP GHGGVLDRIDSLTAAIPVFAVLLWAADWGVM >Mature_271_residues MLKQRIITALILLPIALCGFFLLTGMYFALFIGVVVVLGAWEWARLAGFAAQLMRIGYAAVVAVLLFLMYLLPGLEPWVL VAAVIWWGVATFLVLTYPDSSSHWASAACKLVIGLLILLPAWQGLVLIKQWPLGNWLILSVMVLVWAADIGAYFSGKAFG KRKLAPKVSPGKSWEGVYGGLVVSLGITAAVGFSRDWTVAQFIAALFGAAVIVFISVIGDLTESMFKRQSGVKDSSNLLP GHGGVLDRIDSLTAAIPVFAVLLWAADWGVM
Specific function: Phospholipid biosynthesis. [C]
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family [H]
Homologues:
Organism=Escherichia coli, GI87081696, Length=280, Percent_Identity=45.7142857142857, Blast_Score=199, Evalue=2e-52, Organism=Escherichia coli, GI1787677, Length=113, Percent_Identity=45.1327433628319, Blast_Score=92, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000374 [H]
Pfam domain/function: PF01148 CTP_transf_1 [H]
EC number: =2.7.7.41 [H]
Molecular weight: Translated: 29197; Mature: 29197
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: PS01315 CDS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKQRIITALILLPIALCGFFLLTGMYFALFIGVVVVLGAWEWARLAGFAAQLMRIGYAA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH VVAVLLFLMYLLPGLEPWVLVAAVIWWGVATFLVLTYPDSSSHWASAACKLVIGLLILLP HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH AWQGLVLIKQWPLGNWLILSVMVLVWAADIGAYFSGKAFGKRKLAPKVSPGKSWEGVYGG HCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH LVVSLGITAAVGFSRDWTVAQFIAALFGAAVIVFISVIGDLTESMFKRQSGVKDSSNLLP HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC GHGGVLDRIDSLTAAIPVFAVLLWAADWGVM CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLKQRIITALILLPIALCGFFLLTGMYFALFIGVVVVLGAWEWARLAGFAAQLMRIGYAA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH VVAVLLFLMYLLPGLEPWVLVAAVIWWGVATFLVLTYPDSSSHWASAACKLVIGLLILLP HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH AWQGLVLIKQWPLGNWLILSVMVLVWAADIGAYFSGKAFGKRKLAPKVSPGKSWEGVYGG HCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH LVVSLGITAAVGFSRDWTVAQFIAALFGAAVIVFISVIGDLTESMFKRQSGVKDSSNLLP HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC GHGGVLDRIDSLTAAIPVFAVLLWAADWGVM CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8654980; 10984043 [H]