Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is frzE [H]
Identifier: 66044555
GI number: 66044555
Start: 1482580
End: 1484949
Strand: Direct
Name: frzE [H]
Synonym: Psyr_1307
Alternate gene names: 66044555
Gene position: 1482580-1484949 (Clockwise)
Preceding gene: 66044554
Following gene: 66044556
Centisome position: 24.33
GC content: 62.53
Gene sequence:
>2370_bases ATGACGCCAGATCAAATGCGTGACGCCTCGCTGTTCGAACTGTTCACGCTGGAAGCCGATGCGCAGACCCAGGTACTGAG TGCCGGCCTGCTGGCACTCGAACGTAACCCGACCCAGGCGGATCAGCTGGAAGCCTGCATGCGTGCCGCTCATTCGCTCA AGGGCGCAGCGCGGATTGTCGGCGTCGATTTCGGCGTGAGCGTCGCGCATGTGATGGAAGATTGTCTGGTCAGCGCGCAG GAAGGGCGTCTGCTGCTTCAGGCCGAGCATATCGATGCGCTGCTGTCGGGGACCGACCTGTTGATGCGTATCGCCACGCC TGGCGGCGACAGCGTTGGTCAGCCTGATATCGACAGTTATGTCGAAAGGCTCAATACGTTGCTGGCTTCCGGTGCTGGCG CGGCGCGAACGGTCAGTACGCCACTGCCGGACCCGGCCTCGGACGCTTTACTCGCCAGCGCGATGCTGCAGTTCGAGACG CCCAGCGCGGCAGTTGTGCCGGAGTCTGTGCCCGAGCCCTTGGCCGCAGACTTGCCTGCGTCCGCCAATCCAGCCGCCAT GCCGGCTGCGGAACCTGAAGCACCGTTCACGCCATTGCGTGAACGGCGTGTGGCCGAAGGTGGCGAGCGCGTGTTGCGAG TCACCGCCGAGCGCCTCAACGGGCTGCTGGACATGTCCAGCAAATCGCTGGTCGAGACTCAGCGACTCAAGCCGCTGCTG GCCGGTATGCAGCGGCTCAAGCGTCTGCAAAGCAGCAGTGATCGTGCGCTTGAAGTGCTGGGCGCCAGCTTCGGCGAGGA AGGTCCTTCGGCTGATGTGCAAAAAGCCCTGGAAGACGCGCGTAGCCTCTTGTCCCAGGCGCAGCAGGTGTTGGTCCGGC ACACTGCCGAGCTGGATGAATTCGGCTGGCAGTCGGCGCAACGTGCGCAGTTGTTATACGACACGGCACTGGCCTGCCGG ATGCGACCTTTCGCCGATGTGCTGAACGGCCAGGCGCGCATGGTTCGCGACCTGGGGCGTGAACTGGGCAAACAGGTCCG CTTGCAGATCGAAGGCGAGAAGACGCAGGTCGATCGCGATGTGCTGGAAAAGCTCGATGCGCCATTGACCCATCTGTTGC GCAACGCCGTGGACCACGGCATCGAATCGCCCGAGAAGCGCGTGGCGTCCGGCAAGGACCCTGAAGGTCTGATTCGTCTG CAGGCCTCGCATCAGGCCGGCTTGCTGGTCGTCGAGTTGAGCGATGACGGTGGCGGTGTGGACCTTGAACGTGTGCGCCA GAGCATCGTCGACCGCAAGCTTTCTCCTGCCGAGACCGCTGCGCAGTTGAGCGAGGAGGAACTGCTGAGTTTCCTGTTCC TGCCGGGCTTCAGCATGCGCGACAAGGTCACGCAGATTTCCGGCCGTGGTGTCGGCCTCGATGCCGTGCAGCATATGGTT CGCCAGATGCACGGCAGCGTCGAGCTGCAGCAATGGGCAGGCGAGGGCAGTCGCTTCAGGATAGAAATGCCGCTGACGCT TTCAGTGGTACGCAGCCTGGTCGTGGAAGTGGGCGGTGAAGCCTATGCCTTTCCGCTGGCGCATATCGAGCGCATGCGCG ACCTGCAGCCTGACGATATTCTGCAACTGGAAGGGCGTCAGCACTTCTGGGATGAAGAGCGGCATGTCGGTCTGGTTTCG GCCAGCCAGCTGTTGAACCGGCCACCCGCGCAGAAGGCCGGAGAAACGCTCAAGGTCGTGGTGATTCGCGAGCGCGATGC GGTTTATGGCGTGGCCGTCGAACGCTTCATCGGTGAGCGTACGCTGGTGGTGATGCCGCTCGATGCGCGCCTTGGCAAGG TCCAGGACGTGTCGGCAGGGGCCTTGCTCGACGACGGTTCAGTGGTGTTGATCATCGATGTCGAAGATATGCTGCGCTCG GTGGAAAAACTCCTGAATACCGGCCGTCTGGAGCGCATCGACCGGCGCGCTCGTCAGGCAGATCAGGTGTCACGCAAACG CGTGCTGGTCGTCGATGATTCTTTGACCGTTCGCGAGCTGGAACGCAAGCTGCTGGTCAGTCGCGGTTACGAAGTATCGG TGGCCGTGGACGGAATGGATGGCTGGAATGCCCTGCGCGCCGAGGACTTCGACCTGCTGATCACCGACATCGACATGCCG CGTATGGACGGTATCGAACTGGTGACCCTGTTGCGCCGCGATACCCGCTTGCAGTCCTTGCCGGTCATGGTCGTGTCCTA CAAGGACCGCGAAGAAGACCGGCGTCGCGGCCTGGACGCCGGCGCCGATTATTACCTGGCCAAGGCCAGTTTCCACGATG ATGCCTTGCTCGACGCTGTCGTCGAATTGATAGGAGACGCGCAAGGATGA
Upstream 100 bases:
>100_bases CCAATGCCCGTTTCACCCGTGGCGTCCTGCAATGGAAGGGCCGCAGCCTGCGCTGGCTGGATGAAGATGAGTTGTTGTCG GCGGTGTATCGGAGCCTCAC
Downstream 100 bases:
>100_bases AGATTGCCATCGTCAACGATATGCCCATGGCCATCGAAGCCCTGCGCCGTGCGCTGGCCTTCGAGCCCGCGCATCAGATC ATCTGGGTGGCGTCCAATGG
Product: response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 789; Mature: 788
Protein sequence:
>789_residues MTPDQMRDASLFELFTLEADAQTQVLSAGLLALERNPTQADQLEACMRAAHSLKGAARIVGVDFGVSVAHVMEDCLVSAQ EGRLLLQAEHIDALLSGTDLLMRIATPGGDSVGQPDIDSYVERLNTLLASGAGAARTVSTPLPDPASDALLASAMLQFET PSAAVVPESVPEPLAADLPASANPAAMPAAEPEAPFTPLRERRVAEGGERVLRVTAERLNGLLDMSSKSLVETQRLKPLL AGMQRLKRLQSSSDRALEVLGASFGEEGPSADVQKALEDARSLLSQAQQVLVRHTAELDEFGWQSAQRAQLLYDTALACR MRPFADVLNGQARMVRDLGRELGKQVRLQIEGEKTQVDRDVLEKLDAPLTHLLRNAVDHGIESPEKRVASGKDPEGLIRL QASHQAGLLVVELSDDGGGVDLERVRQSIVDRKLSPAETAAQLSEEELLSFLFLPGFSMRDKVTQISGRGVGLDAVQHMV RQMHGSVELQQWAGEGSRFRIEMPLTLSVVRSLVVEVGGEAYAFPLAHIERMRDLQPDDILQLEGRQHFWDEERHVGLVS ASQLLNRPPAQKAGETLKVVVIRERDAVYGVAVERFIGERTLVVMPLDARLGKVQDVSAGALLDDGSVVLIIDVEDMLRS VEKLLNTGRLERIDRRARQADQVSRKRVLVVDDSLTVRELERKLLVSRGYEVSVAVDGMDGWNALRAEDFDLLITDIDMP RMDGIELVTLLRRDTRLQSLPVMVVSYKDREEDRRRGLDAGADYYLAKASFHDDALLDAVVELIGDAQG
Sequences:
>Translated_789_residues MTPDQMRDASLFELFTLEADAQTQVLSAGLLALERNPTQADQLEACMRAAHSLKGAARIVGVDFGVSVAHVMEDCLVSAQ EGRLLLQAEHIDALLSGTDLLMRIATPGGDSVGQPDIDSYVERLNTLLASGAGAARTVSTPLPDPASDALLASAMLQFET PSAAVVPESVPEPLAADLPASANPAAMPAAEPEAPFTPLRERRVAEGGERVLRVTAERLNGLLDMSSKSLVETQRLKPLL AGMQRLKRLQSSSDRALEVLGASFGEEGPSADVQKALEDARSLLSQAQQVLVRHTAELDEFGWQSAQRAQLLYDTALACR MRPFADVLNGQARMVRDLGRELGKQVRLQIEGEKTQVDRDVLEKLDAPLTHLLRNAVDHGIESPEKRVASGKDPEGLIRL QASHQAGLLVVELSDDGGGVDLERVRQSIVDRKLSPAETAAQLSEEELLSFLFLPGFSMRDKVTQISGRGVGLDAVQHMV RQMHGSVELQQWAGEGSRFRIEMPLTLSVVRSLVVEVGGEAYAFPLAHIERMRDLQPDDILQLEGRQHFWDEERHVGLVS ASQLLNRPPAQKAGETLKVVVIRERDAVYGVAVERFIGERTLVVMPLDARLGKVQDVSAGALLDDGSVVLIIDVEDMLRS VEKLLNTGRLERIDRRARQADQVSRKRVLVVDDSLTVRELERKLLVSRGYEVSVAVDGMDGWNALRAEDFDLLITDIDMP RMDGIELVTLLRRDTRLQSLPVMVVSYKDREEDRRRGLDAGADYYLAKASFHDDALLDAVVELIGDAQG >Mature_788_residues TPDQMRDASLFELFTLEADAQTQVLSAGLLALERNPTQADQLEACMRAAHSLKGAARIVGVDFGVSVAHVMEDCLVSAQE GRLLLQAEHIDALLSGTDLLMRIATPGGDSVGQPDIDSYVERLNTLLASGAGAARTVSTPLPDPASDALLASAMLQFETP SAAVVPESVPEPLAADLPASANPAAMPAAEPEAPFTPLRERRVAEGGERVLRVTAERLNGLLDMSSKSLVETQRLKPLLA GMQRLKRLQSSSDRALEVLGASFGEEGPSADVQKALEDARSLLSQAQQVLVRHTAELDEFGWQSAQRAQLLYDTALACRM RPFADVLNGQARMVRDLGRELGKQVRLQIEGEKTQVDRDVLEKLDAPLTHLLRNAVDHGIESPEKRVASGKDPEGLIRLQ ASHQAGLLVVELSDDGGGVDLERVRQSIVDRKLSPAETAAQLSEEELLSFLFLPGFSMRDKVTQISGRGVGLDAVQHMVR QMHGSVELQQWAGEGSRFRIEMPLTLSVVRSLVVEVGGEAYAFPLAHIERMRDLQPDDILQLEGRQHFWDEERHVGLVSA SQLLNRPPAQKAGETLKVVVIRERDAVYGVAVERFIGERTLVVMPLDARLGKVQDVSAGALLDDGSVVLIIDVEDMLRSV EKLLNTGRLERIDRRARQADQVSRKRVLVVDDSLTVRELERKLLVSRGYEVSVAVDGMDGWNALRAEDFDLLITDIDMPR MDGIELVTLLRRDTRLQSLPVMVVSYKDREEDRRRGLDAGADYYLAKASFHDDALLDAVVELIGDAQG
Specific function: FrzE is involved in a sensory transduction pathway that controls the frequency at which cells reverse their gliding direction. FrzE seems to be capable of autophosphorylating itself on an histidine residue and then to transfer that group to an aspartate r
COG id: COG0643
COG function: function code NT; Chemotaxis protein histidine kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788197, Length=359, Percent_Identity=35.6545961002786, Blast_Score=220, Evalue=3e-58, Organism=Escherichia coli, GI1788191, Length=103, Percent_Identity=38.8349514563107, Blast_Score=71, Evalue=3e-13, Organism=Escherichia coli, GI1788713, Length=117, Percent_Identity=34.1880341880342, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1786599, Length=103, Percent_Identity=33.9805825242718, Blast_Score=63, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002545 - InterPro: IPR011006 - InterPro: IPR004358 - InterPro: IPR008207 - InterPro: IPR005467 - InterPro: IPR001789 [H]
Pfam domain/function: PF01584 CheW; PF02518 HATPase_c; PF01627 Hpt; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 86372; Mature: 86240
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: PS50851 CHEW ; PS50894 HPT ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPDQMRDASLFELFTLEADAQTQVLSAGLLALERNPTQADQLEACMRAAHSLKGAARIV CCCCHHCCCHHHHEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEE GVDFGVSVAHVMEDCLVSAQEGRLLLQAEHIDALLSGTDLLMRIATPGGDSVGQPDIDSY EECCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHH VERLNTLLASGAGAARTVSTPLPDPASDALLASAMLQFETPSAAVVPESVPEPLAADLPA HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCC SANPAAMPAAEPEAPFTPLRERRVAEGGERVLRVTAERLNGLLDMSSKSLVETQRLKPLL CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH AGMQRLKRLQSSSDRALEVLGASFGEEGPSADVQKALEDARSLLSQAQQVLVRHTAELDE HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGWQSAQRAQLLYDTALACRMRPFADVLNGQARMVRDLGRELGKQVRLQIEGEKTQVDRD HCCCHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHEEEEECCCHHHHHHH VLEKLDAPLTHLLRNAVDHGIESPEKRVASGKDPEGLIRLQASHQAGLLVVELSDDGGGV HHHHHCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCCEEEEEECCCCCEEEEEECCCCCCC DLERVRQSIVDRKLSPAETAAQLSEEELLSFLFLPGFSMRDKVTQISGRGVGLDAVQHMV CHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHH RQMHGSVELQQWAGEGSRFRIEMPLTLSVVRSLVVEVGGEAYAFPLAHIERMRDLQPDDI HHHHCCCCHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCE LQLEGRQHFWDEERHVGLVSASQLLNRPPAQKAGETLKVVVIRERDAVYGVAVERFIGER EEECCCCCCCCCHHCCCCEEHHHHHCCCCCHHCCCEEEEEEEECCCCHHHHHHHHHHCCC TLVVMPLDARLGKVQDVSAGALLDDGSVVLIIDVEDMLRSVEKLLNTGRLERIDRRARQA EEEEEECCCCCCCCCCCCCCCEECCCCEEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHH DQVSRKRVLVVDDSLTVRELERKLLVSRGYEVSVAVDGMDGWNALRAEDFDLLITDIDMP HHHHCCEEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCC RMDGIELVTLLRRDTRLQSLPVMVVSYKDREEDRRRGLDAGADYYLAKASFHDDALLDAV CCCCHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHCCCCCCCCEEEEECCCCCHHHHHHH VELIGDAQG HHHHCCCCC >Mature Secondary Structure TPDQMRDASLFELFTLEADAQTQVLSAGLLALERNPTQADQLEACMRAAHSLKGAARIV CCCHHCCCHHHHEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEE GVDFGVSVAHVMEDCLVSAQEGRLLLQAEHIDALLSGTDLLMRIATPGGDSVGQPDIDSY EECCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHH VERLNTLLASGAGAARTVSTPLPDPASDALLASAMLQFETPSAAVVPESVPEPLAADLPA HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCC SANPAAMPAAEPEAPFTPLRERRVAEGGERVLRVTAERLNGLLDMSSKSLVETQRLKPLL CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH AGMQRLKRLQSSSDRALEVLGASFGEEGPSADVQKALEDARSLLSQAQQVLVRHTAELDE HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGWQSAQRAQLLYDTALACRMRPFADVLNGQARMVRDLGRELGKQVRLQIEGEKTQVDRD HCCCHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHEEEEECCCHHHHHHH VLEKLDAPLTHLLRNAVDHGIESPEKRVASGKDPEGLIRLQASHQAGLLVVELSDDGGGV HHHHHCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCCEEEEEECCCCCEEEEEECCCCCCC DLERVRQSIVDRKLSPAETAAQLSEEELLSFLFLPGFSMRDKVTQISGRGVGLDAVQHMV CHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHH RQMHGSVELQQWAGEGSRFRIEMPLTLSVVRSLVVEVGGEAYAFPLAHIERMRDLQPDDI HHHHCCCCHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCE LQLEGRQHFWDEERHVGLVSASQLLNRPPAQKAGETLKVVVIRERDAVYGVAVERFIGER EEECCCCCCCCCHHCCCCEEHHHHHCCCCCHHCCCEEEEEEEECCCCHHHHHHHHHHCCC TLVVMPLDARLGKVQDVSAGALLDDGSVVLIIDVEDMLRSVEKLLNTGRLERIDRRARQA EEEEEECCCCCCCCCCCCCCCEECCCCEEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHH DQVSRKRVLVVDDSLTVRELERKLLVSRGYEVSVAVDGMDGWNALRAEDFDLLITDIDMP HHHHCCEEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCC RMDGIELVTLLRRDTRLQSLPVMVVSYKDREEDRRRGLDAGADYYLAKASFHDDALLDAV CCCCHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHCCCCCCCCEEEEECCCCCHHHHHHH VELIGDAQG HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2165608; 2123853 [H]