Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is thrC [H]
Identifier: 66044539
GI number: 66044539
Start: 1456278
End: 1457687
Strand: Direct
Name: thrC [H]
Synonym: Psyr_1291
Alternate gene names: 66044539
Gene position: 1456278-1457687 (Clockwise)
Preceding gene: 66044538
Following gene: 66044540
Centisome position: 23.9
GC content: 58.79
Gene sequence:
>1410_bases ATGCGCTATATCAGTACTCGCGGGCAAGCGCCTGCATTGAATTTCGAAGACGTGCTGTTGACTGGTCTGGCCAGCGATGG TGGCCTCTATGTGCCGGAAAACCTGCCGCGCTTCACGCAGGAAGAGATCGCTTCCTGGGCAGGTCTGCCTTATCACGAAC TCGCCTTCCGGGTGATGCGCCCCTTCGTGGCGGGCAGCATTCCGGATGCCGACTTCAAAAAGATTCTCGAAGAGACCTAC GGCGTGTTTGCCCACAGTGCTGTTGCGCCGCTGCGCCAGCTGCATGGCAACGAGTGGGTACTCGAACTGTTCCATGGCCC GACGCTGGCGTTCAAGGACTTCGCACTGCAACTGCTCGGCCGCCTGCTTGACTATATTCTGGCCAAGCGTGGCCAGCGTG TCGTGATCATCGGTGCAACCTCGGGCGACACCGGTTCTGCGGCCATCGAAGGCTGCCGTCGCTGCGACAACGTCGACATC TTCATCCTGCACCCGAACAACCGGGTGTCCGATGTACAACGTCGGCAGATGACCACTATCTTCGGTGACAACATCCATAA CATCGCAGTCGAAGGCAACTTCGACGACTGCCAGGAAATGGTCAAGGCCAGCTTCGCTGACCAGAGCTTCTTGAAGGGCA CACCGTTGGTCGCGGTCAACTCGATCAACTGGGCGCGGATCATGGCTCAGATCGTCTACTACTTCCACGCGTCGCTGCAG TTGGGCGGACCTGCGCGTTCGGTATCGTTCTCGGTACCGACCGGTAATTTCGGCGATATCTTTGCCGGTTATCTGGCGCG CAATATGGGCCTGCCGATCAATCAGTTGATCGTTGCCACCAACCGCAACGACATCCTGCACCGCTTCATGAGCGGCAATC AGTACGTCAAGGAAACCCTGCACGCCACGCTGTCGCCTTCCATGGACATCATGGTGTCGTCCAACTTCGAGCGCCTGCTG TTCGACATGCACGGTCGCAACGGCGCTGCCATTGCCGAGTTGATGAGCACGTTCCGCCAGGGTGGCGGTTTCAGCGTCGA GGAAGAGCGCTGGACCGAGACCCGCAAACTGTTCGATTCGCTGGCAGTCAGTGACGAGGACACCTGCACGACCATCGCCG AAGTGTTCGCCAGCACTGGCGAGTTGCTCGACCCGCATACCGCTATCGGGGTGAAGGCTGCGCGTGAATGCCGACGCAGT CTGGACACGCCGATGGTGATTCTGGGCACCGCGCATCCGGTCAAGTTTCCGGAAGCGGTTGAGAAAGCCGGTGTAGGAAA AGCGCTTGAACTACCTGCACATTTGTCTGATTTGTTCGAGCGCGACGAGCGCTGTACGGTTCTGCCAAATGACCTGAAAG CCATACAGGCGTTTGTCAGCCAGCACGGCAATCGCGGCAAACCGCTCTGA
Upstream 100 bases:
>100_bases GCGGCAAGCGGTCAGCTACAAGCTACAAGTCAGACGCCGATCGTTTTGGACTTGCAGCTTGCAGCTTCCAGCTTGCAGCT CGAACCGAAGGTTTGATCCC
Downstream 100 bases:
>100_bases CAGAAGCGTTGTGTAACAACTTTAGGCCCGCCATCTGGCGGGCCTTTCTGTTTCTACGTGCCAAACTTCGCTGGTTTTTC GAACCATAGAGTCGGGTCAT
Product: threonine synthase
Products: NA
Alternate protein names: TS [H]
Number of amino acids: Translated: 469; Mature: 469
Protein sequence:
>469_residues MRYISTRGQAPALNFEDVLLTGLASDGGLYVPENLPRFTQEEIASWAGLPYHELAFRVMRPFVAGSIPDADFKKILEETY GVFAHSAVAPLRQLHGNEWVLELFHGPTLAFKDFALQLLGRLLDYILAKRGQRVVIIGATSGDTGSAAIEGCRRCDNVDI FILHPNNRVSDVQRRQMTTIFGDNIHNIAVEGNFDDCQEMVKASFADQSFLKGTPLVAVNSINWARIMAQIVYYFHASLQ LGGPARSVSFSVPTGNFGDIFAGYLARNMGLPINQLIVATNRNDILHRFMSGNQYVKETLHATLSPSMDIMVSSNFERLL FDMHGRNGAAIAELMSTFRQGGGFSVEEERWTETRKLFDSLAVSDEDTCTTIAEVFASTGELLDPHTAIGVKAARECRRS LDTPMVILGTAHPVKFPEAVEKAGVGKALELPAHLSDLFERDERCTVLPNDLKAIQAFVSQHGNRGKPL
Sequences:
>Translated_469_residues MRYISTRGQAPALNFEDVLLTGLASDGGLYVPENLPRFTQEEIASWAGLPYHELAFRVMRPFVAGSIPDADFKKILEETY GVFAHSAVAPLRQLHGNEWVLELFHGPTLAFKDFALQLLGRLLDYILAKRGQRVVIIGATSGDTGSAAIEGCRRCDNVDI FILHPNNRVSDVQRRQMTTIFGDNIHNIAVEGNFDDCQEMVKASFADQSFLKGTPLVAVNSINWARIMAQIVYYFHASLQ LGGPARSVSFSVPTGNFGDIFAGYLARNMGLPINQLIVATNRNDILHRFMSGNQYVKETLHATLSPSMDIMVSSNFERLL FDMHGRNGAAIAELMSTFRQGGGFSVEEERWTETRKLFDSLAVSDEDTCTTIAEVFASTGELLDPHTAIGVKAARECRRS LDTPMVILGTAHPVKFPEAVEKAGVGKALELPAHLSDLFERDERCTVLPNDLKAIQAFVSQHGNRGKPL >Mature_469_residues MRYISTRGQAPALNFEDVLLTGLASDGGLYVPENLPRFTQEEIASWAGLPYHELAFRVMRPFVAGSIPDADFKKILEETY GVFAHSAVAPLRQLHGNEWVLELFHGPTLAFKDFALQLLGRLLDYILAKRGQRVVIIGATSGDTGSAAIEGCRRCDNVDI FILHPNNRVSDVQRRQMTTIFGDNIHNIAVEGNFDDCQEMVKASFADQSFLKGTPLVAVNSINWARIMAQIVYYFHASLQ LGGPARSVSFSVPTGNFGDIFAGYLARNMGLPINQLIVATNRNDILHRFMSGNQYVKETLHATLSPSMDIMVSSNFERLL FDMHGRNGAAIAELMSTFRQGGGFSVEEERWTETRKLFDSLAVSDEDTCTTIAEVFASTGELLDPHTAIGVKAARECRRS LDTPMVILGTAHPVKFPEAVEKAGVGKALELPAHLSDLFERDERCTVLPNDLKAIQAFVSQHGNRGKPL
Specific function: Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine [H]
COG id: COG0498
COG function: function code E; Threonine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the threonine synthase family [H]
Homologues:
Organism=Homo sapiens, GI149193323, Length=457, Percent_Identity=37.199124726477, Blast_Score=305, Evalue=8e-83, Organism=Homo sapiens, GI153792148, Length=453, Percent_Identity=35.5408388520971, Blast_Score=248, Evalue=1e-65, Organism=Escherichia coli, GI1786185, Length=463, Percent_Identity=33.6933045356371, Blast_Score=236, Evalue=3e-63, Organism=Saccharomyces cerevisiae, GI6319901, Length=460, Percent_Identity=42.8260869565217, Blast_Score=358, Evalue=1e-100,
Paralogues:
None
Copy number: 560 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR004450 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =4.2.3.1 [H]
Molecular weight: Translated: 51748; Mature: 51748
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYISTRGQAPALNFEDVLLTGLASDGGLYVPENLPRFTQEEIASWAGLPYHELAFRVMR CCCCCCCCCCCCCCHHHHHHEEECCCCCEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHH PFVAGSIPDADFKKILEETYGVFAHSAVAPLRQLHGNEWVLELFHGPTLAFKDFALQLLG HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH RLLDYILAKRGQRVVIIGATSGDTGSAAIEGCRRCDNVDIFILHPNNRVSDVQRRQMTTI HHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH FGDNIHNIAVEGNFDDCQEMVKASFADQSFLKGTPLVAVNSINWARIMAQIVYYFHASLQ HCCCCEEEEEECCHHHHHHHHHHHHCCHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHE LGGPARSVSFSVPTGNFGDIFAGYLARNMGLPINQLIVATNRNDILHRFMSGNQYVKETL ECCCCCEEEEECCCCCHHHHHHHHHHHHCCCCHHHEEEECCCHHHHHHHHCCCHHHHHHH HATLSPSMDIMVSSNFERLLFDMHGRNGAAIAELMSTFRQGGGFSVEEERWTETRKLFDS HHHCCCCEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH LAVSDEDTCTTIAEVFASTGELLDPHTAIGVKAARECRRSLDTPMVILGTAHPVKFPEAV HCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHH EKAGVGKALELPAHLSDLFERDERCTVLPNDLKAIQAFVSQHGNRGKPL HHCCCCCCEECCHHHHHHHHCCCCCEECCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRYISTRGQAPALNFEDVLLTGLASDGGLYVPENLPRFTQEEIASWAGLPYHELAFRVMR CCCCCCCCCCCCCCHHHHHHEEECCCCCEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHH PFVAGSIPDADFKKILEETYGVFAHSAVAPLRQLHGNEWVLELFHGPTLAFKDFALQLLG HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH RLLDYILAKRGQRVVIIGATSGDTGSAAIEGCRRCDNVDIFILHPNNRVSDVQRRQMTTI HHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH FGDNIHNIAVEGNFDDCQEMVKASFADQSFLKGTPLVAVNSINWARIMAQIVYYFHASLQ HCCCCEEEEEECCHHHHHHHHHHHHCCHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHE LGGPARSVSFSVPTGNFGDIFAGYLARNMGLPINQLIVATNRNDILHRFMSGNQYVKETL ECCCCCEEEEECCCCCHHHHHHHHHHHHCCCCHHHEEEECCCHHHHHHHHCCCHHHHHHH HATLSPSMDIMVSSNFERLLFDMHGRNGAAIAELMSTFRQGGGFSVEEERWTETRKLFDS HHHCCCCEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH LAVSDEDTCTTIAEVFASTGELLDPHTAIGVKAARECRRSLDTPMVILGTAHPVKFPEAV HCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHH EKAGVGKALELPAHLSDLFERDERCTVLPNDLKAIQAFVSQHGNRGKPL HHCCCCCCEECCHHHHHHHHCCCCCEECCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1333566; 10984043 [H]