Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
---|---|
Accession | NC_007005 |
Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is zraR [C]
Identifier: 66044141
GI number: 66044141
Start: 1008526
End: 1009530
Strand: Direct
Name: zraR [C]
Synonym: Psyr_0886
Alternate gene names: 66044141
Gene position: 1008526-1009530 (Clockwise)
Preceding gene: 66044136
Following gene: 66044142
Centisome position: 16.55
GC content: 59.4
Gene sequence:
>1005_bases ATGTCCACGCTTGCGCTATTGATATGCGATGACTCGAACATGGCGCGAAAGCAGCTGTTGCGCGCGCTACCTGAAGACTG GGATGTGTCGGTCACGCTGGCCACCCAGGGGCAGGAAGGCCTGGAAGCGATTCGTAAAGGTCAGGGCCAGGTGGTCCTGC TCGACCTGACCATGCCGGTGATGGACGGTTACCAGACGCTGACGGCGATTCGTGACGAAAACCTCGACGCCAAGGTGATT GTGGTGTCGGGCGACGTGCAGGACGAAGCCGTGCGTCGGGTCATGGAGTTGGGCGCGCTGGCGTTTCTGAAAAAACCTGC CGACCCGGACGAACTGAAAAGCACGCTGGAGCGCCTGGGCCTGCTGGGCAAGCCTGCGGCGTCACCGGTTGCACTGCCGG CCCTCAACAACAAGGGCGGGGTGATCAGCTTTCAGGATGCGTTCCGCGAAACCGTCAACGTAGCCATGGGCCGTGCAGCG GCGTTGCTGGCCAAGGTACTGGGTGTCTTTGTGCAGTTGCCGGTGCCCAACGTCAACATGCTTGAAGTTGGTGAGCTGCA CATGGCGCTGGCCGATGCGCACAGCGATCAGCGCCTGACTGCGGTGTGTCAGGGCTACATCGGTGGCGGTATTGCAGGCG AGGCGCTGCTGATTTTCCACGACTCGGAAATTTCCGGTATCTCGCAGCTGATGGGCGGCGATCACTCCGACAGTTCCGAC ATGGAGATGCTCCTTGACCTGTCCACGATCCTGATCGGTGCCTGCCTGAGCGGGATTGCCGAACAGATCGACATCGCCTT TTCGCAGGGCCATCCACAGTTGCTGGGTGCACAGGGCGGCATCGACGAGCTTATCCGCATCAATCAGCAACGCTGGAAAA AGACCCTGGCGGTCGAAATCAGTTACAGCGTGGAAGGCCACAATCTGCATTTCGATCTGCTGATGCTGTTCACCGAAGAT TCGGTCGAGCTGCTTACCAAAAAACTCGCCTACATGATGAGCTGA
Upstream 100 bases:
>100_bases GCGTTATAGGCTCGAAGTCAGTCGCTTCCGATGGTGCCGTCAAACGTATACGTGCTGTCCGCCGTGGTCAGCCTGATTTT CCTGCAGTGAGAACCACACG
Downstream 100 bases:
>100_bases CCCATGAGCAACGCTATTGAAATCAACGAGCTTCATTGGTTGCTGGCCGTCACGCAGAACATTGACGTAGGCATCGTGGT GCTGGACCTGAACTACCGCG
Product: response regulator receiver
Products: NA
Alternate protein names: Response Regulator Receiver Protein; CheC Inhibitor Of MCP Methylation; Response Regulator Receiver; Response Regulator Receiver Domain-Containing Protein; Two Component Response Regulator; Response Regulator Receiver Domain Protein; CheY-Like Receiver Protein; Chemotaxis Response Regulator; Chemotaxis Protein; Che Family Two-Component System Response Regulator; Multi-Sensor Hybrid Histidine Kinase; Transcriptional Regulatory Protein; Chemotaxis Protein CheC; Two-Component Hybrid Protein; Chemotaxis Response Regulator CheY; MCP Methylation Inhibitor CheC; Response Regulator Protein; Multi-Sensor Histidine Kinase
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MSTLALLICDDSNMARKQLLRALPEDWDVSVTLATQGQEGLEAIRKGQGQVVLLDLTMPVMDGYQTLTAIRDENLDAKVI VVSGDVQDEAVRRVMELGALAFLKKPADPDELKSTLERLGLLGKPAASPVALPALNNKGGVISFQDAFRETVNVAMGRAA ALLAKVLGVFVQLPVPNVNMLEVGELHMALADAHSDQRLTAVCQGYIGGGIAGEALLIFHDSEISGISQLMGGDHSDSSD MEMLLDLSTILIGACLSGIAEQIDIAFSQGHPQLLGAQGGIDELIRINQQRWKKTLAVEISYSVEGHNLHFDLLMLFTED SVELLTKKLAYMMS
Sequences:
>Translated_334_residues MSTLALLICDDSNMARKQLLRALPEDWDVSVTLATQGQEGLEAIRKGQGQVVLLDLTMPVMDGYQTLTAIRDENLDAKVI VVSGDVQDEAVRRVMELGALAFLKKPADPDELKSTLERLGLLGKPAASPVALPALNNKGGVISFQDAFRETVNVAMGRAA ALLAKVLGVFVQLPVPNVNMLEVGELHMALADAHSDQRLTAVCQGYIGGGIAGEALLIFHDSEISGISQLMGGDHSDSSD MEMLLDLSTILIGACLSGIAEQIDIAFSQGHPQLLGAQGGIDELIRINQQRWKKTLAVEISYSVEGHNLHFDLLMLFTED SVELLTKKLAYMMS >Mature_333_residues STLALLICDDSNMARKQLLRALPEDWDVSVTLATQGQEGLEAIRKGQGQVVLLDLTMPVMDGYQTLTAIRDENLDAKVIV VSGDVQDEAVRRVMELGALAFLKKPADPDELKSTLERLGLLGKPAASPVALPALNNKGGVISFQDAFRETVNVAMGRAAA LLAKVLGVFVQLPVPNVNMLEVGELHMALADAHSDQRLTAVCQGYIGGGIAGEALLIFHDSEISGISQLMGGDHSDSSDM EMLLDLSTILIGACLSGIAEQIDIAFSQGHPQLLGAQGGIDELIRINQQRWKKTLAVEISYSVEGHNLHFDLLMLFTEDS VELLTKKLAYMMS
Specific function: Member Of The Two-Component Regulatory System Zras/Zrar. When Activated By Zras It Acts In Conjunction With Sigma-54 To Regulate The Expression Of Zrap. Positively Autoregulates The Expression Of The Zrasr Operon. [C]
COG id: COG1776
COG function: function code NT; Chemotaxis protein CheC, inhibitor of MCP methylation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790437, Length=113, Percent_Identity=34.5132743362832, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35946; Mature: 35815
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLALLICDDSNMARKQLLRALPEDWDVSVTLATQGQEGLEAIRKGQGQVVLLDLTMPV CCCEEEEEECCCCHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCCCEEEEEECCHH MDGYQTLTAIRDENLDAKVIVVSGDVQDEAVRRVMELGALAFLKKPADPDELKSTLERLG HCCHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC LLGKPAASPVALPALNNKGGVISFQDAFRETVNVAMGRAAALLAKVLGVFVQLPVPNVNM CCCCCCCCCEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCE LEVGELHMALADAHSDQRLTAVCQGYIGGGIAGEALLIFHDSEISGISQLMGGDHSDSSD EEHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHCCCCCCCHH MEMLLDLSTILIGACLSGIAEQIDIAFSQGHPQLLGAQGGIDELIRINQQRWKKTLAVEI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHCEEEEEEE SYSVEGHNLHFDLLMLFTEDSVELLTKKLAYMMS EEEECCCCEEEEEEEEEECCHHHHHHHHHHHHCC >Mature Secondary Structure STLALLICDDSNMARKQLLRALPEDWDVSVTLATQGQEGLEAIRKGQGQVVLLDLTMPV CCEEEEEECCCCHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCCCEEEEEECCHH MDGYQTLTAIRDENLDAKVIVVSGDVQDEAVRRVMELGALAFLKKPADPDELKSTLERLG HCCHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC LLGKPAASPVALPALNNKGGVISFQDAFRETVNVAMGRAAALLAKVLGVFVQLPVPNVNM CCCCCCCCCEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCE LEVGELHMALADAHSDQRLTAVCQGYIGGGIAGEALLIFHDSEISGISQLMGGDHSDSSD EEHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHCCCCCCCHH MEMLLDLSTILIGACLSGIAEQIDIAFSQGHPQLLGAQGGIDELIRINQQRWKKTLAVEI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHCEEEEEEE SYSVEGHNLHFDLLMLFTEDSVELLTKKLAYMMS EEEECCCCEEEEEEEEEECCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA