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The map label for this gene is 66044142

Identifier: 66044142

GI number: 66044142

Start: 1009534

End: 1010016

Strand: Direct

Name: 66044142

Synonym: Psyr_0887

Alternate gene names: NA

Gene position: 1009534-1010016 (Clockwise)

Preceding gene: 66044141

Following gene: 66044143

Centisome position: 16.57

GC content: 55.28

Gene sequence:

>483_bases
ATGAGCAACGCTATTGAAATCAACGAGCTTCATTGGTTGCTGGCCGTCACGCAGAACATTGACGTAGGCATCGTGGTGCT
GGACCTGAACTACCGCGTGACGGTCTGGAATACCTTCATGGAAAACCGCTCGGGTGTGGTGCCCTATGTGGCCATCGACA
AGACTTTTTTCGAGATTTTCCCGGAGGTCAACGCGAAGTGGTTCAGCAAGAAAATCGATAACGTCGTGACCCTCGGCACG
CCGGCGTTCACCATCTGGGAGCAGCGGCCGTATCTGGTGCGTTTCAAGAATTACCAACCGATTACCGGGCAGGAGGAGTT
CATGTATCAGAACACCACACTGTTCCCGCTGCGGTCGACCACCGGTGCGATCAGCCATGTGTGTCTGGTGATCTATGACG
TCACCGACGTCGCGGCCAACCGCAATCAGTTGCTGGCGGCCAACGACAAGCTGCAGCAACTGTCGGGCTCAGTGAAAAGC
TGA

Upstream 100 bases:

>100_bases
CGTGGAAGGCCACAATCTGCATTTCGATCTGCTGATGCTGTTCACCGAAGATTCGGTCGAGCTGCTTACCAAAAAACTCG
CCTACATGATGAGCTGACCC

Downstream 100 bases:

>100_bases
CCCGCGCCCGGGCTTGGCGATGAATGAAACCGGCACTGCGGGCTTGATCCCGCTCGTGCTAGGATCGCGATTTTTCCGCT
GACGCTCAGGGACATCATGC

Product: sensory box protein

Products: NA

Alternate protein names: Diguanylate Cyclase With PAS/PAC Sensor; GGDEF Domain-Containing Protein; Sensory Box/GGDEF Family Protein; Sensor Histidine Kinase; Sensory Box/GGDEF Protein; Response Regulator Receiver Domain Protein; Sensory Box Sensor Histidine Kinase; Response Regulator; PAS/PAC Domain-Containing Protein; PAS/PAC Sensor Signal Transduction Histidine Kinase; GGDEF Domain Protein; Sensor Protein; GGDEF Protein; Sensory Box Protein; PAS Domain-Containing Protein; Signal Transduction Histidine Kinase; PAS/PAC Sensor Protein; Response Regulator Receiver Protein

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MSNAIEINELHWLLAVTQNIDVGIVVLDLNYRVTVWNTFMENRSGVVPYVAIDKTFFEIFPEVNAKWFSKKIDNVVTLGT
PAFTIWEQRPYLVRFKNYQPITGQEEFMYQNTTLFPLRSTTGAISHVCLVIYDVTDVAANRNQLLAANDKLQQLSGSVKS

Sequences:

>Translated_160_residues
MSNAIEINELHWLLAVTQNIDVGIVVLDLNYRVTVWNTFMENRSGVVPYVAIDKTFFEIFPEVNAKWFSKKIDNVVTLGT
PAFTIWEQRPYLVRFKNYQPITGQEEFMYQNTTLFPLRSTTGAISHVCLVIYDVTDVAANRNQLLAANDKLQQLSGSVKS
>Mature_159_residues
SNAIEINELHWLLAVTQNIDVGIVVLDLNYRVTVWNTFMENRSGVVPYVAIDKTFFEIFPEVNAKWFSKKIDNVVTLGTP
AFTIWEQRPYLVRFKNYQPITGQEEFMYQNTTLFPLRSTTGAISHVCLVIYDVTDVAANRNQLLAANDKLQQLSGSVKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18279; Mature: 18148

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNAIEINELHWLLAVTQNIDVGIVVLDLNYRVTVWNTFMENRSGVVPYVAIDKTFFEIF
CCCCEEHHHEEEEEEEECCCCEEEEEEECCEEEEEEEEHHCCCCCCCEEEEECHHHHHHC
PEVNAKWFSKKIDNVVTLGTPAFTIWEQRPYLVRFKNYQPITGQEEFMYQNTTLFPLRST
CCCCHHHHHHHHCCEEEECCCEEEEECCCCEEEEECCCCCCCCCHHEEEECCEEEEECCC
TGAISHVCLVIYDVTDVAANRNQLLAANDKLQQLSGSVKS
CCHHHEEEEEEEEHHHHCCCCCEEEECCCHHHHHCCCCCC
>Mature Secondary Structure 
SNAIEINELHWLLAVTQNIDVGIVVLDLNYRVTVWNTFMENRSGVVPYVAIDKTFFEIF
CCCEEHHHEEEEEEEECCCCEEEEEEECCEEEEEEEEHHCCCCCCCEEEEECHHHHHHC
PEVNAKWFSKKIDNVVTLGTPAFTIWEQRPYLVRFKNYQPITGQEEFMYQNTTLFPLRST
CCCCHHHHHHHHCCEEEECCCEEEEECCCCEEEEECCCCCCCCCHHEEEECCEEEEECCC
TGAISHVCLVIYDVTDVAANRNQLLAANDKLQQLSGSVKS
CCHHHEEEEEEEEHHHHCCCCCEEEECCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA