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The map label for this gene is exbD [C]

Identifier: 66044129

GI number: 66044129

Start: 996605

End: 997012

Strand: Direct

Name: exbD [C]

Synonym: Psyr_0874

Alternate gene names: 66044129

Gene position: 996605-997012 (Clockwise)

Preceding gene: 66044126

Following gene: 66044130

Centisome position: 16.35

GC content: 56.13

Gene sequence:

>408_bases
ATGAGAACGTGGGACGAACCTAAAAAGCGCAAGGCGCACATCGAACTGATCCCCATGATCGACGTGATGATGTTCCTGCT
GGTCTTTTTCGTATTGGTAAGCCTGAACGTGATTCCAGCGTTGGGGATGAAAACCCAGTTGCCGAGCGCCAGCAGTTCAC
AGCAGCTCAAGCCGCAGAACAAATCGATCCTGACGCTGGGGCTCAACGGCGAATTACAGCTCGACGGCAAGGCGACCACG
GTCGACGCTCTGGTGCCTGCCTTGAAGGCGCTGGAAAAACCCGACAGCAAAACCACGATCATCGTTAACAGTGACAAGGG
CGTGGAAGTCGCCCGGCTGGTCGAGATTATGGACACCCTGCGTCTGGGTGGCTTCACGTCAGTCTCCATCGCCACGCGCA
AATCCTGA

Upstream 100 bases:

>100_bases
ACAGCCATGTAACAGTCATGTATCGGTCTTGTAAAACCAACCGATCGGTCATGTTCGGTTGCTAGATTCTCGGCCTCTAA
CAAGAAAGCGAGAGGCTGGC

Downstream 100 bases:

>100_bases
CCATGTATTTTCTGTTTCGTGTACGTCAGTGGCTCGGCGGCCTGCCTGCGCTGGTGGCGCTCATCGCAATCGTGATCGGT
GTGCAGACCCGTCCGCTGAA

Product: biopolymer transport protein ExbD/TolR

Products: NA

Alternate protein names: Biopolymer Transport ExbD/lR Protein

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MRTWDEPKKRKAHIELIPMIDVMMFLLVFFVLVSLNVIPALGMKTQLPSASSSQQLKPQNKSILTLGLNGELQLDGKATT
VDALVPALKALEKPDSKTTIIVNSDKGVEVARLVEIMDTLRLGGFTSVSIATRKS

Sequences:

>Translated_135_residues
MRTWDEPKKRKAHIELIPMIDVMMFLLVFFVLVSLNVIPALGMKTQLPSASSSQQLKPQNKSILTLGLNGELQLDGKATT
VDALVPALKALEKPDSKTTIIVNSDKGVEVARLVEIMDTLRLGGFTSVSIATRKS
>Mature_135_residues
MRTWDEPKKRKAHIELIPMIDVMMFLLVFFVLVSLNVIPALGMKTQLPSASSSQQLKPQNKSILTLGLNGELQLDGKATT
VDALVPALKALEKPDSKTTIIVNSDKGVEVARLVEIMDTLRLGGFTSVSIATRKS

Specific function: Involved In The Tonb-Dependent Energy-Dependent Transport Of Various Receptor-Bound Substrates. [C]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Type II Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789380, Length=122, Percent_Identity=27.0491803278689, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14760; Mature: 14760

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTWDEPKKRKAHIELIPMIDVMMFLLVFFVLVSLNVIPALGMKTQLPSASSSQQLKPQN
CCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
KSILTLGLNGELQLDGKATTVDALVPALKALEKPDSKTTIIVNSDKGVEVARLVEIMDTL
CCEEEEECCCEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHH
RLGGFTSVSIATRKS
HCCCCCEEEEEECCC
>Mature Secondary Structure
MRTWDEPKKRKAHIELIPMIDVMMFLLVFFVLVSLNVIPALGMKTQLPSASSSQQLKPQN
CCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
KSILTLGLNGELQLDGKATTVDALVPALKALEKPDSKTTIIVNSDKGVEVARLVEIMDTL
CCEEEEECCCEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHH
RLGGFTSVSIATRKS
HCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA