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The map label for this gene is yfdZ [C]

Identifier: 66044091

GI number: 66044091

Start: 948197

End: 949369

Strand: Direct

Name: yfdZ [C]

Synonym: Psyr_0836

Alternate gene names: 66044091

Gene position: 948197-949369 (Clockwise)

Preceding gene: 66044078

Following gene: 66044092

Centisome position: 15.56

GC content: 61.55

Gene sequence:

>1173_bases
ATGAGCCAGCCTTACAGTGCGCGCAGTCGCGCCATAGAACCTTTTCATGTCATGGCGTTGCTGGCGCGTGCCAATGAATT
GCAGGCGGCGGGTCATGATGTGATTCACCTTGAAATCGGCGAGCCCGATTTCACCACTGCAGAGCCCATCATAAAGGCTG
GCCAGGCGGCACTGGCAGACGGCAAGACGCGCTACACCGCCGCGCGCGGTCTGCCGCAACTGCGTGAGGCCATTTCCGGG
TTTTACGCTCAGCGTTACGGCGTCGACATTGATCCTCAGCGGATTCTGGTCACGCCGGGCGGTTCAGGCGCCTTGTTGCT
GACCAGCAGCCTGCTGGTCGATCCGGGCAGGCACTGGTTGCTGGCCGACCCTGGCTACCCGTGCAATCGCCACTTTTTGC
GCCTGATAGAAGGCGAAGCGCAACTGGTGCCCGTCGGTCCGCAACAGCGTTATCAACTGACCCCCGAGCTGGTGGCCACG
CACTGGAATCACAACAGTGTCGGCGCTCTGGTGGCGTCACCGGCCAATCCGACCGGCACCCTGTTGAGCCGCGACGAACT
GGCAGCCTTGTCTCAGGCACTGAAAGTCCGCAATGGGCACTTGGTGGTGGACGAGATCTATCACGGCCTGACCTACGGTG
TGGACGCCAGCAGTGTGCTGGAAGTGGATAACGACGCTTTCGTTCTCAATAGTTTTTCAAAGTATTTCGGCATGACCGGG
TGGCGTCTGGGCTGGCTGGTCGCGCCACAGGATGCCGTGGCCGATCTGGAAAAGCTGGCCCAGAACCTCTACATCAGCGC
GCCAAGCATGGCGCAACATGCCGCGCTTGCCTGCTTTGAGCCGCAGACACTGGCCATACTCGAGCAGCGGCGCGCCGAGT
TCGGCCGCCGCCGGGACTTTCTGCTGCCAGCGCTGCGCGAACTGGGTTTCGGTATTGCCGTCGAGCCGGAAGGGGCCTTT
TATTTGTATGCCGACATCTCCGCGTTTGGCGGCGATGCCTTTGCCTTTTGCCGGCACTTTCTGGAAACCGAGCACGTCGC
CTTTACACCAGGCCTCGATTTCGGCCGTTTTCAGGCCGGGCACCATGTGCGCTTTGCCTACACGCAGAGCCTGCCGCGCC
TTGAGCAGGCGGTCGAGCGAATCGCTCGTGGTCTGCGTAGCTGGGGTGTCTGA

Upstream 100 bases:

>100_bases
TTTCAGTCCGCAAATGCACCGTCGGGCGGGTGGTTGGGTAGAATCATGGCGCGCCGTGATGACAATCATGTTTTAACACC
CGCCCTTTAAAGGAATATCC

Downstream 100 bases:

>100_bases
TGCGTTTTTCTCCGCAGCTTGAACAGGGTCGTCTGCTGGTGCGTTACAAGCGCTTTCTCGCTGATATCGAAACCGATAGC
GGTGAATTGCTGACCATTCA

Product: hypothetical protein

Products: NA

Alternate protein names: AspAT; Transaminase A [H]

Number of amino acids: Translated: 390; Mature: 389

Protein sequence:

>390_residues
MSQPYSARSRAIEPFHVMALLARANELQAAGHDVIHLEIGEPDFTTAEPIIKAGQAALADGKTRYTAARGLPQLREAISG
FYAQRYGVDIDPQRILVTPGGSGALLLTSSLLVDPGRHWLLADPGYPCNRHFLRLIEGEAQLVPVGPQQRYQLTPELVAT
HWNHNSVGALVASPANPTGTLLSRDELAALSQALKVRNGHLVVDEIYHGLTYGVDASSVLEVDNDAFVLNSFSKYFGMTG
WRLGWLVAPQDAVADLEKLAQNLYISAPSMAQHAALACFEPQTLAILEQRRAEFGRRRDFLLPALRELGFGIAVEPEGAF
YLYADISAFGGDAFAFCRHFLETEHVAFTPGLDFGRFQAGHHVRFAYTQSLPRLEQAVERIARGLRSWGV

Sequences:

>Translated_390_residues
MSQPYSARSRAIEPFHVMALLARANELQAAGHDVIHLEIGEPDFTTAEPIIKAGQAALADGKTRYTAARGLPQLREAISG
FYAQRYGVDIDPQRILVTPGGSGALLLTSSLLVDPGRHWLLADPGYPCNRHFLRLIEGEAQLVPVGPQQRYQLTPELVAT
HWNHNSVGALVASPANPTGTLLSRDELAALSQALKVRNGHLVVDEIYHGLTYGVDASSVLEVDNDAFVLNSFSKYFGMTG
WRLGWLVAPQDAVADLEKLAQNLYISAPSMAQHAALACFEPQTLAILEQRRAEFGRRRDFLLPALRELGFGIAVEPEGAF
YLYADISAFGGDAFAFCRHFLETEHVAFTPGLDFGRFQAGHHVRFAYTQSLPRLEQAVERIARGLRSWGV
>Mature_389_residues
SQPYSARSRAIEPFHVMALLARANELQAAGHDVIHLEIGEPDFTTAEPIIKAGQAALADGKTRYTAARGLPQLREAISGF
YAQRYGVDIDPQRILVTPGGSGALLLTSSLLVDPGRHWLLADPGYPCNRHFLRLIEGEAQLVPVGPQQRYQLTPELVATH
WNHNSVGALVASPANPTGTLLSRDELAALSQALKVRNGHLVVDEIYHGLTYGVDASSVLEVDNDAFVLNSFSKYFGMTGW
RLGWLVAPQDAVADLEKLAQNLYISAPSMAQHAALACFEPQTLAILEQRRAEFGRRRDFLLPALRELGFGIAVEPEGAFY
LYADISAFGGDAFAFCRHFLETEHVAFTPGLDFGRFQAGHHVRFAYTQSLPRLEQAVERIARGLRSWGV

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI95147551, Length=402, Percent_Identity=25.3731343283582, Blast_Score=133, Evalue=3e-31,
Organism=Homo sapiens, GI169881279, Length=402, Percent_Identity=25.3731343283582, Blast_Score=133, Evalue=3e-31,
Organism=Homo sapiens, GI56713254, Length=399, Percent_Identity=23.8095238095238, Blast_Score=111, Evalue=1e-24,
Organism=Homo sapiens, GI56713256, Length=399, Percent_Identity=23.8095238095238, Blast_Score=111, Evalue=1e-24,
Organism=Homo sapiens, GI169881281, Length=286, Percent_Identity=22.7272727272727, Blast_Score=86, Evalue=6e-17,
Organism=Homo sapiens, GI4507369, Length=340, Percent_Identity=23.8235294117647, Blast_Score=76, Evalue=7e-14,
Organism=Escherichia coli, GI1788722, Length=386, Percent_Identity=26.9430051813472, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI1786816, Length=370, Percent_Identity=27.2972972972973, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1788627, Length=397, Percent_Identity=25.4408060453401, Blast_Score=77, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI71994476, Length=357, Percent_Identity=24.6498599439776, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI71994472, Length=357, Percent_Identity=24.6498599439776, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17567369, Length=282, Percent_Identity=23.4042553191489, Blast_Score=83, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6322401, Length=387, Percent_Identity=22.2222222222222, Blast_Score=88, Evalue=2e-18,
Organism=Drosophila melanogaster, GI28573069, Length=288, Percent_Identity=26.3888888888889, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24646114, Length=288, Percent_Identity=26.3888888888889, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI28573067, Length=288, Percent_Identity=26.3888888888889, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI28573065, Length=288, Percent_Identity=26.3888888888889, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI18859735, Length=376, Percent_Identity=23.6702127659574, Blast_Score=76, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001176
- InterPro:   IPR004839
- InterPro:   IPR004838
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: =2.6.1.1 [H]

Molecular weight: Translated: 42797; Mature: 42666

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: PS00105 AA_TRANSFER_CLASS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQPYSARSRAIEPFHVMALLARANELQAAGHDVIHLEIGEPDFTTAEPIIKAGQAALAD
CCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHCCCHHHCC
GKTRYTAARGLPQLREAISGFYAQRYGVDIDPQRILVTPGGSGALLLTSSLLVDPGRHWL
CCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEHHHHCCCCCEEE
LADPGYPCNRHFLRLIEGEAQLVPVGPQQRYQLTPELVATHWNHNSVGALVASPANPTGT
EECCCCCCCHHHHHHCCCCCEEEECCCCCCEECCHHHHHCCCCCCCCCEEEECCCCCCCC
LLSRDELAALSQALKVRNGHLVVDEIYHGLTYGVDASSVLEVDNDAFVLNSFSKYFGMTG
EECHHHHHHHHHHHHHCCCCEEHHHHHCCCCCCCCCHHEEEECCCEEEHHHHHHHHCCCC
WRLGWLVAPQDAVADLEKLAQNLYISAPSMAQHAALACFEPQTLAILEQRRAEFGRRRDF
CEEEEEECCHHHHHHHHHHHHHHEECCCCHHHHHHHEECCCHHHHHHHHHHHHHCCCHHH
LLPALRELGFGIAVEPEGAFYLYADISAFGGDAFAFCRHFLETEHVAFTPGLDFGRFQAG
HHHHHHHCCCCEEECCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCC
HHVRFAYTQSLPRLEQAVERIARGLRSWGV
CEEEEEEHHCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SQPYSARSRAIEPFHVMALLARANELQAAGHDVIHLEIGEPDFTTAEPIIKAGQAALAD
CCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHCCCHHHCC
GKTRYTAARGLPQLREAISGFYAQRYGVDIDPQRILVTPGGSGALLLTSSLLVDPGRHWL
CCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEHHHHCCCCCEEE
LADPGYPCNRHFLRLIEGEAQLVPVGPQQRYQLTPELVATHWNHNSVGALVASPANPTGT
EECCCCCCCHHHHHHCCCCCEEEECCCCCCEECCHHHHHCCCCCCCCCEEEECCCCCCCC
LLSRDELAALSQALKVRNGHLVVDEIYHGLTYGVDASSVLEVDNDAFVLNSFSKYFGMTG
EECHHHHHHHHHHHHHCCCCEEHHHHHCCCCCCCCCHHEEEECCCEEEHHHHHHHHCCCC
WRLGWLVAPQDAVADLEKLAQNLYISAPSMAQHAALACFEPQTLAILEQRRAEFGRRRDF
CEEEEEECCHHHHHHHHHHHHHHEECCCCHHHHHHHEECCCHHHHHHHHHHHHHCCCHHH
LLPALRELGFGIAVEPEGAFYLYADISAFGGDAFAFCRHFLETEHVAFTPGLDFGRFQAG
HHHHHHHCCCCEEECCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCC
HHVRFAYTQSLPRLEQAVERIARGLRSWGV
CEEEEEEHHCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]