Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is sfsA [H]
Identifier: 66044092
GI number: 66044092
Start: 949369
End: 950082
Strand: Direct
Name: sfsA [H]
Synonym: Psyr_0837
Alternate gene names: 66044092
Gene position: 949369-950082 (Clockwise)
Preceding gene: 66044091
Following gene: 66044094
Centisome position: 15.58
GC content: 60.22
Gene sequence:
>714_bases ATGCGTTTTTCTCCGCAGCTTGAACAGGGTCGTCTGCTGGTGCGTTACAAGCGCTTTCTCGCTGATATCGAAACCGATAG CGGTGAATTGCTGACCATTCACTGCCCTAACACCGGTTCGATGCTCAACTGCATGATGCCCGGCGGGCGCGTGTGGTTCA GTCGCTCGAATGACCCCAAGCGCAAACTGCCGGGCACTTGGGAAATCAGCGAAACCCCGCAGGGTCGCCTGGCCTGTATC AATACCGGACGGGCCAATACGCTGGTTGAAGAGGCGTTGCGCGCCGGGGTCATCAGCGAACTGACGGGGTTCACGGCGCT CAAGCGCGAGGTGGCCTACGGACAGGAAAAAAGTCGTGTGGACTTTCGTCTGGAGTACCCGGATGGCTATCTGTATCTGG AAGTGAAAAGTGTCACTCTGGGATTCGATGGTTCCAGCGTGGCGGCATTCCCCGATGCGGTGACCCAGCGCGGCGCGCGG CACCTGCGCGAACTGGCGACGCTGGCGCGCGAAGGCGTGCGCGCCGTGCTGTTGTATTGCGTCAATCTCACCGGTATCGA CGCTGTGCGGCCGGCGCAGGAGATTGATCCTGCCTACGCAGCGGCATTGCGTGAAGCCATCGATGCCGGTGTGCAAATTC TCGCCTACGGTGCGCAACTGACGTCGGAAGAGATTTTTATCGACCGGCGCCTGCAGGTGCACGGGCTGGATTGA
Upstream 100 bases:
>100_bases AGGCCGGGCACCATGTGCGCTTTGCCTACACGCAGAGCCTGCCGCGCCTTGAGCAGGCGGTCGAGCGAATCGCTCGTGGT CTGCGTAGCTGGGGTGTCTG
Downstream 100 bases:
>100_bases GGCGTCTGGCTACAGGCGGCTCAGACTTCGTCAGGCCTCCAGATGCAGCGACACCCAGATGCCCACGGCGTCTTCACGGC TTTTGATGACGGTCAAGGAC
Product: sugar fermentation stimulation protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MRFSPQLEQGRLLVRYKRFLADIETDSGELLTIHCPNTGSMLNCMMPGGRVWFSRSNDPKRKLPGTWEISETPQGRLACI NTGRANTLVEEALRAGVISELTGFTALKREVAYGQEKSRVDFRLEYPDGYLYLEVKSVTLGFDGSSVAAFPDAVTQRGAR HLRELATLAREGVRAVLLYCVNLTGIDAVRPAQEIDPAYAAALREAIDAGVQILAYGAQLTSEEIFIDRRLQVHGLD
Sequences:
>Translated_237_residues MRFSPQLEQGRLLVRYKRFLADIETDSGELLTIHCPNTGSMLNCMMPGGRVWFSRSNDPKRKLPGTWEISETPQGRLACI NTGRANTLVEEALRAGVISELTGFTALKREVAYGQEKSRVDFRLEYPDGYLYLEVKSVTLGFDGSSVAAFPDAVTQRGAR HLRELATLAREGVRAVLLYCVNLTGIDAVRPAQEIDPAYAAALREAIDAGVQILAYGAQLTSEEIFIDRRLQVHGLD >Mature_237_residues MRFSPQLEQGRLLVRYKRFLADIETDSGELLTIHCPNTGSMLNCMMPGGRVWFSRSNDPKRKLPGTWEISETPQGRLACI NTGRANTLVEEALRAGVISELTGFTALKREVAYGQEKSRVDFRLEYPDGYLYLEVKSVTLGFDGSSVAAFPDAVTQRGAR HLRELATLAREGVRAVLLYCVNLTGIDAVRPAQEIDPAYAAALREAIDAGVQILAYGAQLTSEEIFIDRRLQVHGLD
Specific function: Probable Regulatory Factor Involved In Maltose Metabolism. [C]
COG id: COG1489
COG function: function code R; DNA-binding protein, stimulates sugar fermentation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sfsA family [H]
Homologues:
Organism=Escherichia coli, GI1786340, Length=236, Percent_Identity=48.728813559322, Blast_Score=224, Evalue=4e-60,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005224 [H]
Pfam domain/function: PF03749 SfsA [H]
EC number: NA
Molecular weight: Translated: 26248; Mature: 26248
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFSPQLEQGRLLVRYKRFLADIETDSGELLTIHCPNTGSMLNCMMPGGRVWFSRSNDPK CCCCCCCHHCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEECCCCEEEEECCCCCH RKLPGTWEISETPQGRLACINTGRANTLVEEALRAGVISELTGFTALKREVAYGQEKSRV HCCCCCEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE DFRLEYPDGYLYLEVKSVTLGFDGSSVAAFPDAVTQRGARHLRELATLAREGVRAVLLYC EEEEECCCCEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VNLTGIDAVRPAQEIDPAYAAALREAIDAGVQILAYGAQLTSEEIFIDRRLQVHGLD HCCCCCCCCCCHHHCCHHHHHHHHHHHHCCCEEEEECCHHCCCCEEEECEEEEECCC >Mature Secondary Structure MRFSPQLEQGRLLVRYKRFLADIETDSGELLTIHCPNTGSMLNCMMPGGRVWFSRSNDPK CCCCCCCHHCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEECCCCEEEEECCCCCH RKLPGTWEISETPQGRLACINTGRANTLVEEALRAGVISELTGFTALKREVAYGQEKSRV HCCCCCEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE DFRLEYPDGYLYLEVKSVTLGFDGSSVAAFPDAVTQRGARHLRELATLAREGVRAVLLYC EEEEECCCCEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VNLTGIDAVRPAQEIDPAYAAALREAIDAGVQILAYGAQLTSEEIFIDRRLQVHGLD HCCCCCCCCCCHHHCCHHHHHHHHHHHHCCCEEEEECCHHCCCCEEEECEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA