Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is terA [H]
Identifier: 66044064
GI number: 66044064
Start: 914252
End: 915421
Strand: Direct
Name: terA [H]
Synonym: Psyr_0809
Alternate gene names: 66044064
Gene position: 914252-915421 (Clockwise)
Preceding gene: 66044063
Following gene: 66044065
Centisome position: 15.0
GC content: 59.32
Gene sequence:
>1170_bases ATGACCCAACTTGTCCCGGGCGCCAACGCGCCGGTCGCTGCCGGTCCGCTGACGGTGGAAATTATTTACTCTCCGCTCGC GGACGCTGATATCGATGTGTCTGCGTTCCTGCTGACCAGTTCGGGCAAGGTCCGTGGCGATCAGGACATGTGTTTCTACG GCCAGAAAAGCGTGAACGGCGGTGCGTTGCAGCAGACGGAAGCCTCAGCCGGACGCGCGGTATTCAGTCTTGACCCGAGC CGTCTGGATTCGGTCATCGAGAAGGTTGCCCTGACGGCGACCATCTATGAGAACAAGGCCAGTTTCGGCAGCGTGTCACG CCTGGCATTGAGCATCACCGGCGGTATCGAAGCCGATATCCCGACCAGCGGCATGAAAGAAACCGCGCTGATTCTGGGCG AGTTCTACCTGCGTCAGGGTGCCTGGAAATTCCGTTGCGTGGCCCAGGGTTTTGCCGGCGGCCTTGAGCCGTTGGCGAAA AACTTCGGTGTTGAAGTCGCTGCGCCGCAGGATCAGCCTGCACCTGCACCTGTTCCCGCGCCTGCACCGAAGTCGACCGT CAGTCTGAGCAAGATCACGCTCGACAAGACCCGTGCGTCGATCAGCCTGGAAAAATCCAGTGCCGGTTTCGGTGAGATTC GGGTCAACCTGAACTGGAACCGTCGTAACGACAGCAAGGGCGGCGGCTTCTTCTCTATGAAGAAGAGTAATGCCATCGAC CTTGATGTAGGCTGCCTCTTCGAAATGCAGGACGGTCTCAAAGGCGCTGTTCAGGCGCTGGGCAACTCGTTCGGTTCGCT CAACACCGAGCCTTTCATCAAGTTGATGGGCGATGACCGTACCGGCTCGATCAGCGACGGTGAGTGGCTGCATATCAATG GCGCGCACTGGAGCAAGATCCGTCGCATTCTGGTCTACGCGTTCATCTATGAAGGTGCGCCGAACTGGAAGGAAACCGAC GGGGTGGTCACCATTCACGCGCCGGGCCAGCCGCCCATCGAGGTTCGCCTCAATGAAGAGGGCGGTCGTCAGGGCATGTG TGCCATTGCCCTGCTGGAAAATGACAACGGTGCGGTCAAGGTGACGCGTCGCGTGGATTTCCACAACGGCCACAGCAACA TGGATAAAGCCTACGGCTGGGGCATGCGCTGGGCTGCCGGTTCCAAGTAA
Upstream 100 bases:
>100_bases CGCGCACGCCATCGGGCTGGGATTTCACCGCAGTCGGCCAGGTCACCAACGGTCGCACTGCTGATGATCTGGTCGAGCTG GCGATCGGGGCTATACGCGT
Downstream 100 bases:
>100_bases ACAATACCGTGGTATTTCTGGGCTGGCTGTGCCGCCTCATGGGAGATAGACATGCTGGACTGGTTGAAAACAAACGCAAC AGCTGCTCGCGACAAGCTGG
Product: stress protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MTQLVPGANAPVAAGPLTVEIIYSPLADADIDVSAFLLTSSGKVRGDQDMCFYGQKSVNGGALQQTEASAGRAVFSLDPS RLDSVIEKVALTATIYENKASFGSVSRLALSITGGIEADIPTSGMKETALILGEFYLRQGAWKFRCVAQGFAGGLEPLAK NFGVEVAAPQDQPAPAPVPAPAPKSTVSLSKITLDKTRASISLEKSSAGFGEIRVNLNWNRRNDSKGGGFFSMKKSNAID LDVGCLFEMQDGLKGAVQALGNSFGSLNTEPFIKLMGDDRTGSISDGEWLHINGAHWSKIRRILVYAFIYEGAPNWKETD GVVTIHAPGQPPIEVRLNEEGGRQGMCAIALLENDNGAVKVTRRVDFHNGHSNMDKAYGWGMRWAAGSK
Sequences:
>Translated_389_residues MTQLVPGANAPVAAGPLTVEIIYSPLADADIDVSAFLLTSSGKVRGDQDMCFYGQKSVNGGALQQTEASAGRAVFSLDPS RLDSVIEKVALTATIYENKASFGSVSRLALSITGGIEADIPTSGMKETALILGEFYLRQGAWKFRCVAQGFAGGLEPLAK NFGVEVAAPQDQPAPAPVPAPAPKSTVSLSKITLDKTRASISLEKSSAGFGEIRVNLNWNRRNDSKGGGFFSMKKSNAID LDVGCLFEMQDGLKGAVQALGNSFGSLNTEPFIKLMGDDRTGSISDGEWLHINGAHWSKIRRILVYAFIYEGAPNWKETD GVVTIHAPGQPPIEVRLNEEGGRQGMCAIALLENDNGAVKVTRRVDFHNGHSNMDKAYGWGMRWAAGSK >Mature_388_residues TQLVPGANAPVAAGPLTVEIIYSPLADADIDVSAFLLTSSGKVRGDQDMCFYGQKSVNGGALQQTEASAGRAVFSLDPSR LDSVIEKVALTATIYENKASFGSVSRLALSITGGIEADIPTSGMKETALILGEFYLRQGAWKFRCVAQGFAGGLEPLAKN FGVEVAAPQDQPAPAPVPAPAPKSTVSLSKITLDKTRASISLEKSSAGFGEIRVNLNWNRRNDSKGGGFFSMKKSNAIDL DVGCLFEMQDGLKGAVQALGNSFGSLNTEPFIKLMGDDRTGSISDGEWLHINGAHWSKIRRILVYAFIYEGAPNWKETDG VVTIHAPGQPPIEVRLNEEGGRQGMCAIALLENDNGAVKVTRRVDFHNGHSNMDKAYGWGMRWAAGSK
Specific function: Not yet known [H]
COG id: COG4110
COG function: function code R; Uncharacterized protein involved in stress response
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017115 - InterPro: IPR019303 - InterPro: IPR003325 [H]
Pfam domain/function: PF10138 Tellurium_res; PF02342 TerD [H]
EC number: NA
Molecular weight: Translated: 41497; Mature: 41366
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQLVPGANAPVAAGPLTVEIIYSPLADADIDVSAFLLTSSGKVRGDQDMCFYGQKSVNG CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCEEEECCCCCCC GALQQTEASAGRAVFSLDPSRLDSVIEKVALTATIYENKASFGSVSRLALSITGGIEADI CCCCCCHHCCCCEEEEECHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEEEEECCCCCCC PTSGMKETALILGEFYLRQGAWKFRCVAQGFAGGLEPLAKNFGVEVAAPQDQPAPAPVPA CCCCCHHHHHHHHHHHHHCCCEEEEEEEHHHCCCHHHHHHHCCEEEECCCCCCCCCCCCC PAPKSTVSLSKITLDKTRASISLEKSSAGFGEIRVNLNWNRRNDSKGGGFFSMKKSNAID CCCCCCEEEEEEEEECCCEEEEEECCCCCCEEEEEEEEECCCCCCCCCCEEEEECCCCEE LDVGCLFEMQDGLKGAVQALGNSFGSLNTEPFIKLMGDDRTGSISDGEWLHINGAHWSKI EEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCHHHH RRILVYAFIYEGAPNWKETDGVVTIHAPGQPPIEVRLNEEGGRQGMCAIALLENDNGAVK HHHHHEEEEECCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCEEEEEEEECCCCEEE VTRRVDFHNGHSNMDKAYGWGMRWAAGSK EEEEEEECCCCCCCHHHHCCCEEECCCCC >Mature Secondary Structure TQLVPGANAPVAAGPLTVEIIYSPLADADIDVSAFLLTSSGKVRGDQDMCFYGQKSVNG CCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCEEEECCCCCCC GALQQTEASAGRAVFSLDPSRLDSVIEKVALTATIYENKASFGSVSRLALSITGGIEADI CCCCCCHHCCCCEEEEECHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEEEEECCCCCCC PTSGMKETALILGEFYLRQGAWKFRCVAQGFAGGLEPLAKNFGVEVAAPQDQPAPAPVPA CCCCCHHHHHHHHHHHHHCCCEEEEEEEHHHCCCHHHHHHHCCEEEECCCCCCCCCCCCC PAPKSTVSLSKITLDKTRASISLEKSSAGFGEIRVNLNWNRRNDSKGGGFFSMKKSNAID CCCCCCEEEEEEEEECCCEEEEEECCCCCCEEEEEEEEECCCCCCCCCCEEEEECCCCEE LDVGCLFEMQDGLKGAVQALGNSFGSLNTEPFIKLMGDDRTGSISDGEWLHINGAHWSKI EEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCHHHH RRILVYAFIYEGAPNWKETDGVVTIHAPGQPPIEVRLNEEGGRQGMCAIALLENDNGAVK HHHHHEEEEECCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCEEEEEEEECCCCEEE VTRRVDFHNGHSNMDKAYGWGMRWAAGSK EEEEEEECCCCCCCHHHHCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3049247 [H]