Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
---|---|
Accession | NC_007005 |
Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is terZ [H]
Identifier: 66044063
GI number: 66044063
Start: 913662
End: 914255
Strand: Direct
Name: terZ [H]
Synonym: Psyr_0808
Alternate gene names: 66044063
Gene position: 913662-914255 (Clockwise)
Preceding gene: 66044062
Following gene: 66044064
Centisome position: 14.99
GC content: 56.06
Gene sequence:
>594_bases ATGGCACTCACTTTGGCAAAGAACCAGACGATCTCACTCGAGAAAACTGCTGGTACAGGCCTCAAGAAAGTCAGCATGGG ACTTGGATGGGACCCTGAAAAAGCCAGTGGTTTCTTCGGAAAATTGCTCGGTGGTGGCGGTGGCGACATCGACCTTGATG CCTCGTGCATCATGCTTGACGCTGCCAAAGGACGCCTCGATCTGGTCTGGTTTCGCCAACTGCAATCGCTTGACGGTGCC ATTCAGCATTCGGGTGACAACCGGACCGGCGAAGGCGCGGGCGACGATGAAACCATCAGCGTCGATCTGGAAAAACTGCC TGCCAACGTCAAATACCTGGTGTTCACCGTCAATTCGTTCACCGGTCAGAATTTCGAAAAAGTCGCCAATGCCTACTGCC GTATTGTCGATCTGGGCGGCCGTAATGAACTGGGCCGCTTTGATCTGTCCGAAAAAGGCCAGCACACCGGCGTGGTGATG TCCTACCTGACGCGCACGCCATCGGGCTGGGATTTCACCGCAGTCGGCCAGGTCACCAACGGTCGCACTGCTGATGATCT GGTCGAGCTGGCGATCGGGGCTATACGCGTATGA
Upstream 100 bases:
>100_bases CCCGTTAACGCCAAGTTACACAATCCTGATGGCAAAGACGGGCCAACACGGTAAGGCTGTAACACTTTTATCCGAAATCC AACGTCACATGGAGCGAAAA
Downstream 100 bases:
>100_bases CCCAACTTGTCCCGGGCGCCAACGCGCCGGTCGCTGCCGGTCCGCTGACGGTGGAAATTATTTACTCTCCGCTCGCGGAC GCTGATATCGATGTGTCTGC
Product: stress protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MALTLAKNQTISLEKTAGTGLKKVSMGLGWDPEKASGFFGKLLGGGGGDIDLDASCIMLDAAKGRLDLVWFRQLQSLDGA IQHSGDNRTGEGAGDDETISVDLEKLPANVKYLVFTVNSFTGQNFEKVANAYCRIVDLGGRNELGRFDLSEKGQHTGVVM SYLTRTPSGWDFTAVGQVTNGRTADDLVELAIGAIRV
Sequences:
>Translated_197_residues MALTLAKNQTISLEKTAGTGLKKVSMGLGWDPEKASGFFGKLLGGGGGDIDLDASCIMLDAAKGRLDLVWFRQLQSLDGA IQHSGDNRTGEGAGDDETISVDLEKLPANVKYLVFTVNSFTGQNFEKVANAYCRIVDLGGRNELGRFDLSEKGQHTGVVM SYLTRTPSGWDFTAVGQVTNGRTADDLVELAIGAIRV >Mature_196_residues ALTLAKNQTISLEKTAGTGLKKVSMGLGWDPEKASGFFGKLLGGGGGDIDLDASCIMLDAAKGRLDLVWFRQLQSLDGAI QHSGDNRTGEGAGDDETISVDLEKLPANVKYLVFTVNSFTGQNFEKVANAYCRIVDLGGRNELGRFDLSEKGQHTGVVMS YLTRTPSGWDFTAVGQVTNGRTADDLVELAIGAIRV
Specific function: Not known; seems to contribute to the tellurium resistance (Ter) mechanism. Also involved in phage inhibition (Phi) and colicin resistance (PacB) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CAPAB/TerDEXZ family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019303 - InterPro: IPR003325 [H]
Pfam domain/function: PF10138 Tellurium_res; PF02342 TerD [H]
EC number: NA
Molecular weight: Translated: 21003; Mature: 20872
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALTLAKNQTISLEKTAGTGLKKVSMGLGWDPEKASGFFGKLLGGGGGDIDLDASCIMLD CEEEECCCCEEEEECCCCCCCEEECCCCCCCCHHHCCHHHHHHCCCCCCCCCCCEEEEEE AAKGRLDLVWFRQLQSLDGAIQHSGDNRTGEGAGDDETISVDLEKLPANVKYLVFTVNSF CCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHCCCCEEEEEEEEECC TGQNFEKVANAYCRIVDLGGRNELGRFDLSEKGQHTGVVMSYLTRTPSGWDFTAVGQVTN CCCCHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCC GRTADDLVELAIGAIRV CCCHHHHHHHHHHHHCC >Mature Secondary Structure ALTLAKNQTISLEKTAGTGLKKVSMGLGWDPEKASGFFGKLLGGGGGDIDLDASCIMLD EEEECCCCEEEEECCCCCCCEEECCCCCCCCHHHCCHHHHHHCCCCCCCCCCCEEEEEE AAKGRLDLVWFRQLQSLDGAIQHSGDNRTGEGAGDDETISVDLEKLPANVKYLVFTVNSF CCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHCCCCEEEEEEEEECC TGQNFEKVANAYCRIVDLGGRNELGRFDLSEKGQHTGVVMSYLTRTPSGWDFTAVGQVTN CCCCHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCC GRTADDLVELAIGAIRV CCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7665479 [H]