Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is 66043879
Identifier: 66043879
GI number: 66043879
Start: 702078
End: 702839
Strand: Direct
Name: 66043879
Synonym: Psyr_0612
Alternate gene names: NA
Gene position: 702078-702839 (Clockwise)
Preceding gene: 66043878
Following gene: 66043880
Centisome position: 11.52
GC content: 56.82
Gene sequence:
>762_bases ATGTTGCAAATTATCGTTCCGATGGCCGGGGCCGGGAGTCGCTTTGCGGTTGCGGGCTACACCGATCCCAAACCGTTGAT CCCTGTACATGGTGTACCGATGATCAAGGTCGTGATCGACAACCTGACGCCGGAGTGCCCGCACAGATTCATCTTTATCT GTCAGGCGGAACAGGTCGCCCGTTACGGGCTGAGGGAAAAACTGAATGCCTGGGCGCCCGGCTGCGAGATCGTCGAACTC GGCGGCCTGACCGGGGGCGCTGCGTGCTCGGTGTATGCAGCAAGACACCTGCTCGACGACAGCCAGCAAGTGATGATCGC CAACAGCGACCAGTACGTCGATGTGGATATAAACGCCTATCTGCAGGCAATGAACGAGAGCGATGCAGAGGGTTTGATCA TGACCATGAAAGCCAACGATCCGAAATGGTCTTTCGTGGGTTTCAGTGCAGCAGGTCTGATCGACCGTGTGGTGGAGAAG GAGGTTATTTCTGACGAGGCCACCGTCGGCATCTATAACTTTCGCCGCGCAGATCAACTGATATCGGCCATCGAGGCGAT GATCGCGAAAGATCTTCGCGTCAATGGCGAATTCTATGTCGCACCGGTTTACAACGAGCTCATCGGGCAGGGCGCCAGGG TCATTCATTACAGCATTGGCGCAGAAGGTCATGGCATGTATGGCCTGGGCATCCCGGCAGACCTCAACCAGTTTCTGTCG CTGCCGCTGAGCAGGCAGGCAGCTTCGGGAAAAGAGGCCTGA
Upstream 100 bases:
>100_bases GCGTGGCCTGATGACCGAGCACGGTTATTACTGATTCATTGTTTCGCGATGCCATGCTTCCAGTCAACTTGGCCATCACT CAATTCATAAAGGTATTTCC
Downstream 100 bases:
>100_bases GATGCAGATCATCAGCCATCGCGGCTATTGGTTGCAAAAGCCGGAGCGTAATTTGCCCGAAGCCTTTCATCGATCATTCG ACCTTGGCTTCGGCACCGAA
Product: nucleotidyl transferase
Products: NA
Alternate protein names: Nucleotidyltransferase; DTDP-Glucose Pyrophosphorylase; Phosphatase/Phosphohexomutase; Capsular Polysaccharide Biosynthesis Protein; Glucose-1-Phosphate Thymidylyltransferase; Nucleoside-Diphosphate-Sugar Pyrophosphorylase; Pyrophosphorylase; Dolichyl-Phosphate Mannose Synthase; Nucleotidyl Transferase Family; UTP-Glucose-1-Phosphate Uridylyltransferase; Lipopolysaccharide Biosynthesis Protein; Glucose-1-Phosphate Thymidyltransferase
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MLQIIVPMAGAGSRFAVAGYTDPKPLIPVHGVPMIKVVIDNLTPECPHRFIFICQAEQVARYGLREKLNAWAPGCEIVEL GGLTGGAACSVYAARHLLDDSQQVMIANSDQYVDVDINAYLQAMNESDAEGLIMTMKANDPKWSFVGFSAAGLIDRVVEK EVISDEATVGIYNFRRADQLISAIEAMIAKDLRVNGEFYVAPVYNELIGQGARVIHYSIGAEGHGMYGLGIPADLNQFLS LPLSRQAASGKEA
Sequences:
>Translated_253_residues MLQIIVPMAGAGSRFAVAGYTDPKPLIPVHGVPMIKVVIDNLTPECPHRFIFICQAEQVARYGLREKLNAWAPGCEIVEL GGLTGGAACSVYAARHLLDDSQQVMIANSDQYVDVDINAYLQAMNESDAEGLIMTMKANDPKWSFVGFSAAGLIDRVVEK EVISDEATVGIYNFRRADQLISAIEAMIAKDLRVNGEFYVAPVYNELIGQGARVIHYSIGAEGHGMYGLGIPADLNQFLS LPLSRQAASGKEA >Mature_253_residues MLQIIVPMAGAGSRFAVAGYTDPKPLIPVHGVPMIKVVIDNLTPECPHRFIFICQAEQVARYGLREKLNAWAPGCEIVEL GGLTGGAACSVYAARHLLDDSQQVMIANSDQYVDVDINAYLQAMNESDAEGLIMTMKANDPKWSFVGFSAAGLIDRVVEK EVISDEATVGIYNFRRADQLISAIEAMIAKDLRVNGEFYVAPVYNELIGQGARVIHYSIGAEGHGMYGLGIPADLNQFLS LPLSRQAASGKEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27361; Mature: 27361
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQIIVPMAGAGSRFAVAGYTDPKPLIPVHGVPMIKVVIDNLTPECPHRFIFICQAEQVA CEEEEEEECCCCCEEEEECCCCCCCCCEECCCCEEEEEECCCCCCCCCEEEEEECHHHHH RYGLREKLNAWAPGCEIVELGGLTGGAACSVYAARHLLDDSQQVMIANSDQYVDVDINAY HHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEEEEHHHH LQAMNESDAEGLIMTMKANDPKWSFVGFSAAGLIDRVVEKEVISDEATVGIYNFRRADQL HHHCCCCCCCCEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHH ISAIEAMIAKDLRVNGEFYVAPVYNELIGQGARVIHYSIGAEGHGMYGLGIPADLNQFLS HHHHHHHHHHHEEECCEEEEEEHHHHHHCCCCEEEEEEECCCCCCEEECCCCCCHHHHHC LPLSRQAASGKEA CCCCCCCCCCCCC >Mature Secondary Structure MLQIIVPMAGAGSRFAVAGYTDPKPLIPVHGVPMIKVVIDNLTPECPHRFIFICQAEQVA CEEEEEEECCCCCEEEEECCCCCCCCCEECCCCEEEEEECCCCCCCCCEEEEEECHHHHH RYGLREKLNAWAPGCEIVELGGLTGGAACSVYAARHLLDDSQQVMIANSDQYVDVDINAY HHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEEEEHHHH LQAMNESDAEGLIMTMKANDPKWSFVGFSAAGLIDRVVEKEVISDEATVGIYNFRRADQL HHHCCCCCCCCEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHH ISAIEAMIAKDLRVNGEFYVAPVYNELIGQGARVIHYSIGAEGHGMYGLGIPADLNQFLS HHHHHHHHHHHEEECCEEEEEEHHHHHHCCCCEEEEEEECCCCCCEEECCCCCCHHHHHC LPLSRQAASGKEA CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA