Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is ycsG [H]
Identifier: 66043763
GI number: 66043763
Start: 538075
End: 539307
Strand: Direct
Name: ycsG [H]
Synonym: Psyr_0496
Alternate gene names: 66043763
Gene position: 538075-539307 (Clockwise)
Preceding gene: 66043760
Following gene: 66043764
Centisome position: 8.83
GC content: 62.29
Gene sequence:
>1233_bases GTGACACAGACTGCCAATGAGTTCACCAAGGCGCGCCGCGCCTCATTGATCGCCGCGATCTTCATGATGGCGACCTCTGC CATCGGCCCTGGCTTTCTGACCCAGACAGCCACGTTCACCGCGACGCTGGGGGCGGCGTTTGCCTTCGGCATCCTGGCTT CGATCCTGATCGACTTCGTGGTACAGCTGAATGTCTGGCGCATCGTCACGCTGACCCGAATGCGCGCGGCCGACCTGGCC AACGCAGCGATCCCCGGCAGCGGTTATCTGCTCGCGGTATTGGTCATCTTCGGCGGCCTGGTATTCAGTCTGGGCAACAT CGCCGGTGCGGGCCTGGGCTTGAACGCGTTGACCGGGCTTGATCCCAAATGGGGTGGCGCCTTGAGCGCGTTGATCGCCA TCGCGATCTTTTCGTCGCACCGCGCCGGCATCGCCATGGACCGCATCATGATGGTGCTGGGCACCCTGAAGGTCTGCCTG ATTCTGTTCGCCGCCTTTGCCTCGCATCCGCCGCTGGGTGAAGCGCTGCGCCAGACCGTCCTGCCGGACATGGTCGATTT CGCGGCCATCACCACCATTGTCGGCGGCACGGTCGGCGGCTATATCACTTACGCCGGTGCTCACCGCTTGCTGGATCGCG GCACCGTCGGGGTCGAGAACATCGATGTAGTGTCCAAGGCGGCGCTCACCGGTATTCTGGTCACCGGGGTTGTTCGTTAC ATACTCTTTCTGGCGATCCTCGGCGTGGTCGCCAGCGGCGTCGTCATCGACGTGTCCGGTAAGGGCGCAAACCCTGCGGC CCAGGCGTTCACCGCTGCCGCTGGCAACTTCGGCCTGATCATGTTCGGCCTGGTGCTCTGGGCGGCCGGCATCAGCAGCG TGATCGGCGCGTCCTATACTTCAATGTCGTTCATCACCGTGTTTTCCAAGCGCATCACTGAACGCGCGCGCAACCTCGCG ACTGTCGGCTTTATCCTGATCACCGTGGTCGTATACGTCATGTGGGGCAAACCACCGGCCGCGCTGCTGGTCTTTGCCGG GGGCTTCAACGGTTTGATCCTGCCACTGGGCCTGAGCATTTTCATGTACGTCGGCTGGCGCCGGTCCGACATGATGGACG GCTACCACTACCCGCGCTGGCTGCTGGTACTGGGCGTGCTGACCTGTCTGCTGTCGTGGTACATGGCGTTCAAATCAGTC GGTCCTATCTTTGCCTTCATCAATGCAGCCTGA
Upstream 100 bases:
>100_bases CAACAATATTATCTTTATGTATCTACAACTTGGCGCGCTTGAATGACCTTTGGCATGGTCGTTGCTCAAGCAGATTACCT CTCATCTCAGGAATGCCGCC
Downstream 100 bases:
>100_bases TTTCGGAGAATAAAAATGCCTGCAATAGACCTCAACAGTGATCTCGGTGAAAGCTTCGGCGCCTGGAGCATGGGCGATGA CGAGGCGATTCTCGATGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MTQTANEFTKARRASLIAAIFMMATSAIGPGFLTQTATFTATLGAAFAFGILASILIDFVVQLNVWRIVTLTRMRAADLA NAAIPGSGYLLAVLVIFGGLVFSLGNIAGAGLGLNALTGLDPKWGGALSALIAIAIFSSHRAGIAMDRIMMVLGTLKVCL ILFAAFASHPPLGEALRQTVLPDMVDFAAITTIVGGTVGGYITYAGAHRLLDRGTVGVENIDVVSKAALTGILVTGVVRY ILFLAILGVVASGVVIDVSGKGANPAAQAFTAAAGNFGLIMFGLVLWAAGISSVIGASYTSMSFITVFSKRITERARNLA TVGFILITVVVYVMWGKPPAALLVFAGGFNGLILPLGLSIFMYVGWRRSDMMDGYHYPRWLLVLGVLTCLLSWYMAFKSV GPIFAFINAA
Sequences:
>Translated_410_residues MTQTANEFTKARRASLIAAIFMMATSAIGPGFLTQTATFTATLGAAFAFGILASILIDFVVQLNVWRIVTLTRMRAADLA NAAIPGSGYLLAVLVIFGGLVFSLGNIAGAGLGLNALTGLDPKWGGALSALIAIAIFSSHRAGIAMDRIMMVLGTLKVCL ILFAAFASHPPLGEALRQTVLPDMVDFAAITTIVGGTVGGYITYAGAHRLLDRGTVGVENIDVVSKAALTGILVTGVVRY ILFLAILGVVASGVVIDVSGKGANPAAQAFTAAAGNFGLIMFGLVLWAAGISSVIGASYTSMSFITVFSKRITERARNLA TVGFILITVVVYVMWGKPPAALLVFAGGFNGLILPLGLSIFMYVGWRRSDMMDGYHYPRWLLVLGVLTCLLSWYMAFKSV GPIFAFINAA >Mature_409_residues TQTANEFTKARRASLIAAIFMMATSAIGPGFLTQTATFTATLGAAFAFGILASILIDFVVQLNVWRIVTLTRMRAADLAN AAIPGSGYLLAVLVIFGGLVFSLGNIAGAGLGLNALTGLDPKWGGALSALIAIAIFSSHRAGIAMDRIMMVLGTLKVCLI LFAAFASHPPLGEALRQTVLPDMVDFAAITTIVGGTVGGYITYAGAHRLLDRGTVGVENIDVVSKAALTGILVTGVVRYI LFLAILGVVASGVVIDVSGKGANPAAQAFTAAAGNFGLIMFGLVLWAAGISSVIGASYTSMSFITVFSKRITERARNLAT VGFILITVVVYVMWGKPPAALLVFAGGFNGLILPLGLSIFMYVGWRRSDMMDGYHYPRWLLVLGVLTCLLSWYMAFKSVG PIFAFINAA
Specific function: Unknown
COG id: COG1914
COG function: function code P; Mn2+ and Fe2+ transporters of the NRAMP family
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NRAMP family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001046 [H]
Pfam domain/function: PF01566 Nramp [H]
EC number: NA
Molecular weight: Translated: 42978; Mature: 42846
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTANEFTKARRASLIAAIFMMATSAIGPGFLTQTATFTATLGAAFAFGILASILIDFV CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VQLNVWRIVTLTRMRAADLANAAIPGSGYLLAVLVIFGGLVFSLGNIAGAGLGLNALTGL HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCC DPKWGGALSALIAIAIFSSHRAGIAMDRIMMVLGTLKVCLILFAAFASHPPLGEALRQTV CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH LPDMVDFAAITTIVGGTVGGYITYAGAHRLLDRGTVGVENIDVVSKAALTGILVTGVVRY HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH ILFLAILGVVASGVVIDVSGKGANPAAQAFTAAAGNFGLIMFGLVLWAAGISSVIGASYT HHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHH SMSFITVFSKRITERARNLATVGFILITVVVYVMWGKPPAALLVFAGGFNGLILPLGLSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEECCCCCHHHHHHHHH FMYVGWRRSDMMDGYHYPRWLLVLGVLTCLLSWYMAFKSVGPIFAFINAA HHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCC >Mature Secondary Structure TQTANEFTKARRASLIAAIFMMATSAIGPGFLTQTATFTATLGAAFAFGILASILIDFV CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VQLNVWRIVTLTRMRAADLANAAIPGSGYLLAVLVIFGGLVFSLGNIAGAGLGLNALTGL HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCC DPKWGGALSALIAIAIFSSHRAGIAMDRIMMVLGTLKVCLILFAAFASHPPLGEALRQTV CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH LPDMVDFAAITTIVGGTVGGYITYAGAHRLLDRGTVGVENIDVVSKAALTGILVTGVVRY HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH ILFLAILGVVASGVVIDVSGKGANPAAQAFTAAAGNFGLIMFGLVLWAAGISSVIGASYT HHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHH SMSFITVFSKRITERARNLATVGFILITVVVYVMWGKPPAALLVFAGGFNGLILPLGLSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEECCCCCHHHHHHHHH FMYVGWRRSDMMDGYHYPRWLLVLGVLTCLLSWYMAFKSVGPIFAFINAA HHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377; 8969502 [H]