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The map label for this gene is ybgL [C]

Identifier: 66043764

GI number: 66043764

Start: 539323

End: 540087

Strand: Direct

Name: ybgL [C]

Synonym: Psyr_0497

Alternate gene names: 66043764

Gene position: 539323-540087 (Clockwise)

Preceding gene: 66043763

Following gene: 66043765

Centisome position: 8.85

GC content: 65.75

Gene sequence:

>765_bases
ATGCCTGCAATAGACCTCAACAGTGATCTCGGTGAAAGCTTCGGCGCCTGGAGCATGGGCGATGACGAGGCGATTCTCGA
TGTGGTCAGCAGCGCCAACGTGGCCTGCGGTTTCCATGCCGGTGACCCGGCCGGGATCCTGCGTACCCTTGAGGCCGCTG
CGGCCCGGGGCGTTGCCATCGGCGCGCATGTGGCCTACCCGGACCTGGTAGGGTTTGGCCGCCGCAACATGGACATCCCG
AGCGACCAACTGACCGCCGACGTCATTTATCAGATCGGCGCGCTTCAGGGCCTGGCCCGCAGCGCCGGGACCCGCGTGAG
CTACGTCAAACCCCACGGCGCGCTGTACAACACCATCGCTGGTGATCAGCGTCAGGCCGCGGCGGTCATTCAGGCGCTGT
TGCGCATTGATCCCGCGCTGAAGCTGGTGTGCCTGGCCAACTCGCCGCTGCTCGACTGGGCACGCGAAGCCGGGCTTTCC
TGCGTCGCCGAAGCGTTCGCCGACCGCGCCTATACCGCTCAAGGCACGCTGGTCTCGCGCTCGCGGCCCGGTGCCGTGCT
GCACGATGCCGAACTGATCGCCGAGCGCATGCTGCGCCTGGTGCGCGAAGACGTCATCGAGGCTGAAGATGGCCGCGAAA
TCAGCCTGCAGGCCGATTCGATCTGCGTGCATGGCGACAGCCCGGGCGCGGTGAACATCGCCCGCATCCTGAAAAACCGT
TTGCACGATGCAGGCGTCACTGTCCGCGCATTCAATCGAGGCTGA

Upstream 100 bases:

>100_bases
ACTGGGCGTGCTGACCTGTCTGCTGTCGTGGTACATGGCGTTCAAATCAGTCGGTCCTATCTTTGCCTTCATCAATGCAG
CCTGATTTCGGAGAATAAAA

Downstream 100 bases:

>100_bases
TCATGAACTCACTGCAACTCGCCCGCGAGGCAGCCAGCGCCGCCCGTACCCGTTATCGCCAGGGATTCGTCGCGCCGACC
GCTGGCGAGGCGCCTGGTCT

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MPAIDLNSDLGESFGAWSMGDDEAILDVVSSANVACGFHAGDPAGILRTLEAAAARGVAIGAHVAYPDLVGFGRRNMDIP
SDQLTADVIYQIGALQGLARSAGTRVSYVKPHGALYNTIAGDQRQAAAVIQALLRIDPALKLVCLANSPLLDWAREAGLS
CVAEAFADRAYTAQGTLVSRSRPGAVLHDAELIAERMLRLVREDVIEAEDGREISLQADSICVHGDSPGAVNIARILKNR
LHDAGVTVRAFNRG

Sequences:

>Translated_254_residues
MPAIDLNSDLGESFGAWSMGDDEAILDVVSSANVACGFHAGDPAGILRTLEAAAARGVAIGAHVAYPDLVGFGRRNMDIP
SDQLTADVIYQIGALQGLARSAGTRVSYVKPHGALYNTIAGDQRQAAAVIQALLRIDPALKLVCLANSPLLDWAREAGLS
CVAEAFADRAYTAQGTLVSRSRPGAVLHDAELIAERMLRLVREDVIEAEDGREISLQADSICVHGDSPGAVNIARILKNR
LHDAGVTVRAFNRG
>Mature_253_residues
PAIDLNSDLGESFGAWSMGDDEAILDVVSSANVACGFHAGDPAGILRTLEAAAARGVAIGAHVAYPDLVGFGRRNMDIPS
DQLTADVIYQIGALQGLARSAGTRVSYVKPHGALYNTIAGDQRQAAAVIQALLRIDPALKLVCLANSPLLDWAREAGLSC
VAEAFADRAYTAQGTLVSRSRPGAVLHDAELIAERMLRLVREDVIEAEDGREISLQADSICVHGDSPGAVNIARILKNRL
HDAGVTVRAFNRG

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family [H]

Homologues:

Organism=Escherichia coli, GI1786931, Length=247, Percent_Identity=41.2955465587045, Blast_Score=185, Evalue=3e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR005501 [H]

Pfam domain/function: PF03746 LamB_YcsF [H]

EC number: NA

Molecular weight: Translated: 26792; Mature: 26660

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAIDLNSDLGESFGAWSMGDDEAILDVVSSANVACGFHAGDPAGILRTLEAAAARGVAI
CCCCCCCCHHHHCCCCCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCEEE
GAHVAYPDLVGFGRRNMDIPSDQLTADVIYQIGALQGLARSAGTRVSYVKPHGALYNTIA
ECHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHC
GDQRQAAAVIQALLRIDPALKLVCLANSPLLDWAREAGLSCVAEAFADRAYTAQGTLVSR
CCHHHHHHHHHHHHHCCHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEC
SRPGAVLHDAELIAERMLRLVREDVIEAEDGREISLQADSICVHGDSPGAVNIARILKNR
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECEEEEECCCCCCHHHHHHHHHH
LHDAGVTVRAFNRG
HHHCCCEEEEECCC
>Mature Secondary Structure 
PAIDLNSDLGESFGAWSMGDDEAILDVVSSANVACGFHAGDPAGILRTLEAAAARGVAI
CCCCCCCHHHHCCCCCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCEEE
GAHVAYPDLVGFGRRNMDIPSDQLTADVIYQIGALQGLARSAGTRVSYVKPHGALYNTIA
ECHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHC
GDQRQAAAVIQALLRIDPALKLVCLANSPLLDWAREAGLSCVAEAFADRAYTAQGTLVSR
CCHHHHHHHHHHHHHCCHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEC
SRPGAVLHDAELIAERMLRLVREDVIEAEDGREISLQADSICVHGDSPGAVNIARILKNR
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECEEEEECCCCCCHHHHHHHHHH
LHDAGVTVRAFNRG
HHHCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12928499 [H]