Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is 66043722
Identifier: 66043722
GI number: 66043722
Start: 491164
End: 493038
Strand: Direct
Name: 66043722
Synonym: Psyr_0455
Alternate gene names: NA
Gene position: 491164-493038 (Clockwise)
Preceding gene: 66043719
Following gene: 66043723
Centisome position: 8.06
GC content: 62.29
Gene sequence:
>1875_bases ATGCTTTCTGGTTGGCTGCGCGCCTGTGCGCTGATAGTGGCAGGGTTGGTCAGCGTTTCGACGCTCGCCGATGAAAAACA ACGAACCGCCATTGTCGTCGGTGGTGGTCTGGCAGGTTTGACTGCCGCCTATGAACTGCAGGCCAAAGGCTGGCAGGTGA CGCTGCTGGAAGCCAAGCCGAGCCTGGGCGGACGCTCCGGTCTGGCGACCAGCGAGTGGATCGGCAACACCAAGGCTCAG CCTGTGCTGAACCGCTACCTGGACAGCTTCAAGCTGCCTACTGTGCCTGCGCCTGAATTCGTGCGCACGCCCAGCTACCT GATCGACGGTGTGTACTTCACCCAGGCTGACCTGGCTGTCAAACAGCCGGCGACCGCCGAAGCCATCAAGCGCTACAACG ACACGCTGGATAACCTCGCGCGTTCGGTGGACGACCCGGAAAACCCGGCGTCCAACAGCACGCTGTTTGCGCTGGACCAG ATCAACGTCGCCAACTGGCTGGACCGCCTGAACCTGCCTGTCACGGCGCGTCAGTTGATCAATCAGCAGATCCGTACCCG CTACGACGAGCCTTCGCGCCTGTCGCTGCTGTACCTCGCCCAGCAATCGCGGGTGTATCGCTCGGTCGACGAGCGTGACT TGCGTGCTGCACGTCTGCCCGGTGGCAGCGCGGTGCTGACCCAGGCGTTCGTCAAGCAACTCAAGACCGTCAAGACCAGC TCGCCGGTGACGGCAGTCATTCAGGAAAAGGACAAGGTCACCGTCAAGGCTGGCGCGACCAGCTACACAGCCGACTACGC AGTCATGGCCGTGCCGTTGCGTTCGCTGGGCAAGATCCAGATGACGCCTGCACTGGACGCGCAGCACATGGGCGCGATCA AGAGCACCAACTACGGCTGGCGCGACCAGATCATGCTCAAGTTCAAGACCCCGGTCTGGGACAGCAAGGCGCGCATGTCC GGTGAAGTGTTCAGTAACACCGGTCTGGGCATGTTGTGGGTAGAGCCGGCGCTTAAAGGTGGCGCCAACGTGGTCATCAA CCTGTCGGGCGACAACGCGCGCATCATGCAGGCCTTCGGCGACAAGCAGATGGTCGATCAGGTGTTGATCCGTCTGCATG CGTTCTACCCTGAGGCACGCGGTGCGTACACCGGCTATGAAATCCGCCGCTACAGCGTCGATCCCTCCACCGGCGGTTCT TACCTGGCGTTCGGTCCCGGTCAGATCAGCAAATACTGGCGTCTGTGGGAACGGCCGATTCTGCGTGTAGCCTTTGCTGG CGAGCACACCGACACCTTGTACCCCGGCACCCTGGAAGGCGCCCTGCGCAGTGGTCAGCGTGCAGCCGGTCAGGTGCAAG ATCTGGCCGCTGGCAAGTCGTTCGAACCGGTCAAGGTTGCGCCGCCAAAAGCACCGGCCCCGGCTGCGCAGAAATCCGAA GGCAATTTCTTCAGCAATCTGTTCGGCGGTTCCTCCGACAAGCCGGCCGAACCTGCCAAGCCGCAGGCTGACAAGCCAGG CTTCTTCTCGCGCATATTCGGCGGTGGTGAGCAACCGGCGCCGGCACCTGCTCCGGTTGAGAAAGCGGTAGAGCCGGCTC CAGCGCCTGCACCGGCTGCCGCTCCGGCACCCGTGGTTGCGCCGGTTGTTCAGCCTGCCAAACCGCCGGTAAAAGCCGAG CCAGCGAAGAAGCCAGCGACCAAGGCTGAGCCTGCGAAGAAAGTGCAGAGCAAGGAAGCGGCCAGGAAAGAAGCGGCTAA AAAAGAGGCTGCGAAGAAGGAAGCGGCCAAAAAAGAGGCCGCGAAAAAGGCTCAGAGCAAACCGGCTCCAGCCAAGACCC CTGCTGACGCAGCGCCTGCAGACGCCAACAACTGA
Upstream 100 bases:
>100_bases CATTGCTGGCGGCTATTTGATGGCTCGCGTATCCTGCGCAGCGAGTCGATGTGTCGGGCTGACTTGCCCTATCTTCCCTA TGTTTTCTGGAGTTCGCCGA
Downstream 100 bases:
>100_bases CCAGCCGATGGCTGACTGAAAGGGATGCGGTTCATACCGCATCCCTTTTTTTATGCACGCTCGATTCGTTCTATCCCTGT GGGTTGACCTTGTCGGGCCT
Product: amine oxidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 624; Mature: 624
Protein sequence:
>624_residues MLSGWLRACALIVAGLVSVSTLADEKQRTAIVVGGGLAGLTAAYELQAKGWQVTLLEAKPSLGGRSGLATSEWIGNTKAQ PVLNRYLDSFKLPTVPAPEFVRTPSYLIDGVYFTQADLAVKQPATAEAIKRYNDTLDNLARSVDDPENPASNSTLFALDQ INVANWLDRLNLPVTARQLINQQIRTRYDEPSRLSLLYLAQQSRVYRSVDERDLRAARLPGGSAVLTQAFVKQLKTVKTS SPVTAVIQEKDKVTVKAGATSYTADYAVMAVPLRSLGKIQMTPALDAQHMGAIKSTNYGWRDQIMLKFKTPVWDSKARMS GEVFSNTGLGMLWVEPALKGGANVVINLSGDNARIMQAFGDKQMVDQVLIRLHAFYPEARGAYTGYEIRRYSVDPSTGGS YLAFGPGQISKYWRLWERPILRVAFAGEHTDTLYPGTLEGALRSGQRAAGQVQDLAAGKSFEPVKVAPPKAPAPAAQKSE GNFFSNLFGGSSDKPAEPAKPQADKPGFFSRIFGGGEQPAPAPAPVEKAVEPAPAPAPAAAPAPVVAPVVQPAKPPVKAE PAKKPATKAEPAKKVQSKEAARKEAAKKEAAKKEAAKKEAAKKAQSKPAPAKTPADAAPADANN
Sequences:
>Translated_624_residues MLSGWLRACALIVAGLVSVSTLADEKQRTAIVVGGGLAGLTAAYELQAKGWQVTLLEAKPSLGGRSGLATSEWIGNTKAQ PVLNRYLDSFKLPTVPAPEFVRTPSYLIDGVYFTQADLAVKQPATAEAIKRYNDTLDNLARSVDDPENPASNSTLFALDQ INVANWLDRLNLPVTARQLINQQIRTRYDEPSRLSLLYLAQQSRVYRSVDERDLRAARLPGGSAVLTQAFVKQLKTVKTS SPVTAVIQEKDKVTVKAGATSYTADYAVMAVPLRSLGKIQMTPALDAQHMGAIKSTNYGWRDQIMLKFKTPVWDSKARMS GEVFSNTGLGMLWVEPALKGGANVVINLSGDNARIMQAFGDKQMVDQVLIRLHAFYPEARGAYTGYEIRRYSVDPSTGGS YLAFGPGQISKYWRLWERPILRVAFAGEHTDTLYPGTLEGALRSGQRAAGQVQDLAAGKSFEPVKVAPPKAPAPAAQKSE GNFFSNLFGGSSDKPAEPAKPQADKPGFFSRIFGGGEQPAPAPAPVEKAVEPAPAPAPAAAPAPVVAPVVQPAKPPVKAE PAKKPATKAEPAKKVQSKEAARKEAAKKEAAKKEAAKKEAAKKAQSKPAPAKTPADAAPADANN >Mature_624_residues MLSGWLRACALIVAGLVSVSTLADEKQRTAIVVGGGLAGLTAAYELQAKGWQVTLLEAKPSLGGRSGLATSEWIGNTKAQ PVLNRYLDSFKLPTVPAPEFVRTPSYLIDGVYFTQADLAVKQPATAEAIKRYNDTLDNLARSVDDPENPASNSTLFALDQ INVANWLDRLNLPVTARQLINQQIRTRYDEPSRLSLLYLAQQSRVYRSVDERDLRAARLPGGSAVLTQAFVKQLKTVKTS SPVTAVIQEKDKVTVKAGATSYTADYAVMAVPLRSLGKIQMTPALDAQHMGAIKSTNYGWRDQIMLKFKTPVWDSKARMS GEVFSNTGLGMLWVEPALKGGANVVINLSGDNARIMQAFGDKQMVDQVLIRLHAFYPEARGAYTGYEIRRYSVDPSTGGS YLAFGPGQISKYWRLWERPILRVAFAGEHTDTLYPGTLEGALRSGQRAAGQVQDLAAGKSFEPVKVAPPKAPAPAAQKSE GNFFSNLFGGSSDKPAEPAKPQADKPGFFSRIFGGGEQPAPAPAPVEKAVEPAPAPAPAAAPAPVVAPVVQPAKPPVKAE PAKKPATKAEPAKKVQSKEAARKEAAKKEAAKKEAAKKEAAKKAQSKPAPAKTPADAAPADANN
Specific function: Unknown
COG id: COG1231
COG function: function code E; Monoamine oxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flavin monoamine oxidase family [H]
Homologues:
Organism=Homo sapiens, GI4557735, Length=498, Percent_Identity=24.6987951807229, Blast_Score=104, Evalue=2e-22, Organism=Homo sapiens, GI38202207, Length=453, Percent_Identity=24.0618101545254, Blast_Score=87, Evalue=6e-17, Organism=Homo sapiens, GI58761546, Length=266, Percent_Identity=26.3157894736842, Blast_Score=77, Evalue=5e-14, Organism=Homo sapiens, GI58761544, Length=266, Percent_Identity=26.3157894736842, Blast_Score=77, Evalue=7e-14, Organism=Homo sapiens, GI116256451, Length=246, Percent_Identity=28.8617886178862, Blast_Score=72, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001613 - InterPro: IPR002937 [H]
Pfam domain/function: PF01593 Amino_oxidase [H]
EC number: NA
Molecular weight: Translated: 66744; Mature: 66744
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSGWLRACALIVAGLVSVSTLADEKQRTAIVVGGGLAGLTAAYELQAKGWQVTLLEAKP CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHEEEECCCEEEEEEECCC SLGGRSGLATSEWIGNTKAQPVLNRYLDSFKLPTVPAPEFVRTPSYLIDGVYFTQADLAV CCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHCCCHHHHCCEEEEECCHHH KQPATAEAIKRYNDTLDNLARSVDDPENPASNSTLFALDQINVANWLDRLNLPVTARQLI CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCHHHHHHH NQQIRTRYDEPSRLSLLYLAQQSRVYRSVDERDLRAARLPGGSAVLTQAFVKQLKTVKTS HHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC SPVTAVIQEKDKVTVKAGATSYTADYAVMAVPLRSLGKIQMTPALDAQHMGAIKSTNYGW CCEEEEEECCCCEEEEECCCCCCCCHHHEEECHHHCCCEEECCCCCHHHHCCHHCCCCCC RDQIMLKFKTPVWDSKARMSGEVFSNTGLGMLWVEPALKGGANVVINLSGDNARIMQAFG CCEEEEEEECCCCCCHHHCCCCHHCCCCCEEEEECHHHCCCCEEEEEECCCCCHHHHHHC DKQMVDQVLIRLHAFYPEARGAYTGYEIRRYSVDPSTGGSYLAFGPGQISKYWRLWERPI CHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCEEEECCHHHHHHHHHHHCCC LRVAFAGEHTDTLYPGTLEGALRSGQRAAGQVQDLAAGKSFEPVKVAPPKAPAPAAQKSE EEEEECCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCC GNFFSNLFGGSSDKPAEPAKPQADKPGFFSRIFGGGEQPAPAPAPVEKAVEPAPAPAPAA CCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCC APAPVVAPVVQPAKPPVKAEPAKKPATKAEPAKKVQSKEAARKEAAKKEAAKKEAAKKEA CCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKKAQSKPAPAKTPADAAPADANN HHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLSGWLRACALIVAGLVSVSTLADEKQRTAIVVGGGLAGLTAAYELQAKGWQVTLLEAKP CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHEEEECCCEEEEEEECCC SLGGRSGLATSEWIGNTKAQPVLNRYLDSFKLPTVPAPEFVRTPSYLIDGVYFTQADLAV CCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHCCCHHHHCCEEEEECCHHH KQPATAEAIKRYNDTLDNLARSVDDPENPASNSTLFALDQINVANWLDRLNLPVTARQLI CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCHHHHHHH NQQIRTRYDEPSRLSLLYLAQQSRVYRSVDERDLRAARLPGGSAVLTQAFVKQLKTVKTS HHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC SPVTAVIQEKDKVTVKAGATSYTADYAVMAVPLRSLGKIQMTPALDAQHMGAIKSTNYGW CCEEEEEECCCCEEEEECCCCCCCCHHHEEECHHHCCCEEECCCCCHHHHCCHHCCCCCC RDQIMLKFKTPVWDSKARMSGEVFSNTGLGMLWVEPALKGGANVVINLSGDNARIMQAFG CCEEEEEEECCCCCCHHHCCCCHHCCCCCEEEEECHHHCCCCEEEEEECCCCCHHHHHHC DKQMVDQVLIRLHAFYPEARGAYTGYEIRRYSVDPSTGGSYLAFGPGQISKYWRLWERPI CHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCEEEECCHHHHHHHHHHHCCC LRVAFAGEHTDTLYPGTLEGALRSGQRAAGQVQDLAAGKSFEPVKVAPPKAPAPAAQKSE EEEEECCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCC GNFFSNLFGGSSDKPAEPAKPQADKPGFFSRIFGGGEQPAPAPAPVEKAVEPAPAPAPAA CCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCC APAPVVAPVVQPAKPPVKAEPAKKPATKAEPAKKVQSKEAARKEAAKKEAAKKEAAKKEA CCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKKAQSKPAPAKTPADAAPADANN HHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]