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The map label for this gene is yqfA [C]

Identifier: 66043719

GI number: 66043719

Start: 487976

End: 488590

Strand: Direct

Name: yqfA [C]

Synonym: Psyr_0452

Alternate gene names: 66043719

Gene position: 487976-488590 (Clockwise)

Preceding gene: 66043717

Following gene: 66043722

Centisome position: 8.01

GC content: 58.05

Gene sequence:

>615_bases
ATGTACTACGGAGAAAAATTCAACGCCTGGTCGCATCTGGTTGGCGCCGTACTGGCGGCCGTCGGTGCGATCTGGCTATT
GGTCATGGCCAGCCTGCATGGCGATGTCTGGAAAGTGGTCAGCATGGCCATCTATGGTGTGTGTCTGGTGACGCTGTACA
GCGTCTCGACGGTCTACCACAGCGTCAAGGGACGCTCGAAATCGATCATGCAGAAGGTCGACCACTTTTCGATCTACCTG
ATGATTGCCGGCAGCTACACCCCGTTCTGTCTCGTGACATTGCGCGGCGCGTGGGGCTGGACCCTGTTCGGCATTGTCTG
GGGGCTGGCGCTGATCGGCATCCTGCAAGAGATAAAACCGCGCTCCGAAGCGCGAATCATGTCCATCGTGATTTACGCGG
TGATGGGCTGGATCGTGCTGGTGGCCGTCAAGCCACTGCTGGCTGCGCTCGGTGTATCGGGTTTCATCTGGCTGGCCGGA
GGCGGCGTGCTGTACACCGTCGGCATCCTGTTCTTCGCCTACGACCAGATCCGCCACTTTCACGGCATCTGGCACCTGTT
CGTCATTGCCGGCAGTTTGATGCACTTTGTGGCGATCTGTTTTTATGTGCTGTGA

Upstream 100 bases:

>100_bases
TGCGCTGATTGTGCCCTGTAATGACAGATACGTTGCTCTTTGTTTCAATAACCGGGAGCGTCTGTCATCAGTATTTTCTC
TAGGCGAGGGCAATAAGCGG

Downstream 100 bases:

>100_bases
AAGTGGCCAGGTTCAGGCCTCAATGGCTGTGTAAATGCAAATCCTTGTGGGAGCGAGCCGGTGTCTGACTCTGAGCGTGC
AGCGCGTTTGAGGACGCATC

Product: HylII

Products: NA

Alternate protein names: Hemolysin III; Hly-III [H]

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MYYGEKFNAWSHLVGAVLAAVGAIWLLVMASLHGDVWKVVSMAIYGVCLVTLYSVSTVYHSVKGRSKSIMQKVDHFSIYL
MIAGSYTPFCLVTLRGAWGWTLFGIVWGLALIGILQEIKPRSEARIMSIVIYAVMGWIVLVAVKPLLAALGVSGFIWLAG
GGVLYTVGILFFAYDQIRHFHGIWHLFVIAGSLMHFVAICFYVL

Sequences:

>Translated_204_residues
MYYGEKFNAWSHLVGAVLAAVGAIWLLVMASLHGDVWKVVSMAIYGVCLVTLYSVSTVYHSVKGRSKSIMQKVDHFSIYL
MIAGSYTPFCLVTLRGAWGWTLFGIVWGLALIGILQEIKPRSEARIMSIVIYAVMGWIVLVAVKPLLAALGVSGFIWLAG
GGVLYTVGILFFAYDQIRHFHGIWHLFVIAGSLMHFVAICFYVL
>Mature_204_residues
MYYGEKFNAWSHLVGAVLAAVGAIWLLVMASLHGDVWKVVSMAIYGVCLVTLYSVSTVYHSVKGRSKSIMQKVDHFSIYL
MIAGSYTPFCLVTLRGAWGWTLFGIVWGLALIGILQEIKPRSEARIMSIVIYAVMGWIVLVAVKPLLAALGVSGFIWLAG
GGVLYTVGILFFAYDQIRHFHGIWHLFVIAGSLMHFVAICFYVL

Specific function: Unknown

COG id: COG1272

COG function: function code R; Predicted membrane protein, hemolysin III homolog

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0073 (Hly-III) family [H]

Homologues:

Organism=Homo sapiens, GI154759275, Length=180, Percent_Identity=32.7777777777778, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI52630445, Length=205, Percent_Identity=30.2439024390244, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI154759277, Length=200, Percent_Identity=30, Blast_Score=73, Evalue=1e-13,
Organism=Escherichia coli, GI1789266, Length=201, Percent_Identity=39.3034825870647, Blast_Score=136, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI71996356, Length=224, Percent_Identity=31.6964285714286, Blast_Score=80, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004254
- InterPro:   IPR005744 [H]

Pfam domain/function: PF03006 HlyIII [H]

EC number: NA

Molecular weight: Translated: 22582; Mature: 22582

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYYGEKFNAWSHLVGAVLAAVGAIWLLVMASLHGDVWKVVSMAIYGVCLVTLYSVSTVYH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SVKGRSKSIMQKVDHFSIYLMIAGSYTPFCLVTLRGAWGWTLFGIVWGLALIGILQEIKP
HHCCCHHHHHHHHHHHEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCC
RSEARIMSIVIYAVMGWIVLVAVKPLLAALGVSGFIWLAGGGVLYTVGILFFAYDQIRHF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHH
HGIWHLFVIAGSLMHFVAICFYVL
HHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MYYGEKFNAWSHLVGAVLAAVGAIWLLVMASLHGDVWKVVSMAIYGVCLVTLYSVSTVYH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SVKGRSKSIMQKVDHFSIYLMIAGSYTPFCLVTLRGAWGWTLFGIVWGLALIGILQEIKP
HHCCCHHHHHHHHHHHEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCC
RSEARIMSIVIYAVMGWIVLVAVKPLLAALGVSGFIWLAGGGVLYTVGILFFAYDQIRHF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHH
HGIWHLFVIAGSLMHFVAICFYVL
HHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7495855 [H]