| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is narI [H]
Identifier: 62390074
GI number: 62390074
Start: 1247185
End: 1247964
Strand: Reverse
Name: narI [H]
Synonym: cg1341
Alternate gene names: 62390074
Gene position: 1247964-1247185 (Counterclockwise)
Preceding gene: 62390075
Following gene: 62390073
Centisome position: 38.02
GC content: 57.95
Gene sequence:
>780_bases ATGTCAAACTTTGAAACGTTCCTCTGGGTTGCCTACCCCTGGCTGTGTATCGCCGCCTACATCATCGGCATTTCTTGGCG CTGGCGCGCCGACCAATTCGGTTGGACCACCCACTCCTCCCAAATCTACGAATCCAAACTCCTCCGCATCGCCTCCCCAC TCTTCCACTGGGGCATGGTGTTCGTGGTGATCGGCCACCTCATGGGACTTGCCATCCCCAAGAGCTGGACCCAAGCTGTA GGAATTTCTGACGCCGCTTACCACCTCATCGCCACCATCCCAGGCACCATTGCCGGCATCGCTGCAGTCCTTGGACTCAT CGGCTTGATTATCCGTCGCGTGATCAACAAAACCGTCTTCCTGTCCACCTCACGCTCCGACAAAGTGATGTATGTGCTAC TCGGCGCTGCAATTTTGTCCGGTTTCATCGCCACCGTCTCCACCCAGGTCTTCGGCGGCGCACACGGCTACGACTACCGC GAAACCATCTCCCCATGGCTGCGCCAACTGCTCATCTTCAACGCTCAACCAGAGCTCATGGCTGATGTCCCTTGGGAATT CAAGGTCCACATCGTCGCTGGATTCACCCTCATCGCACTGTGGCCATTCACCCGCCTAGTCCACGCGTTCTCCGCACCAG TTGGATACGTCACCCGCCCCTACGTGGTCTATCGCACCCGCGACACCACCTCTGAACCGGCACGCCAAAACGTCGCCTGG GAACCGATCCGCTCGGTCAAAAATCAGCTCGACAATGACTCGAAATGGCACGGCGCCTAA
Upstream 100 bases:
>100_bases ACATGGAGCTCATCCGCAGCGGTCCACCAGCAGAAATGGTGGGCATCGGCACGCCTCTACCGTTCCCCACCTCACAACCG GACATTCACTAGGACACACT
Downstream 100 bases:
>100_bases ATTCCTCACAAGCCCCCTAGTTAATCTCAGGGGGCTTGTTGCTTGGTAAACAAAACATTGTTTAGGGTTTTACAGTATTA AATATGGTATGATTCCCTAT
Product: respiratory nitrate reductase 2 gamma chain
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MSNFETFLWVAYPWLCIAAYIIGISWRWRADQFGWTTHSSQIYESKLLRIASPLFHWGMVFVVIGHLMGLAIPKSWTQAV GISDAAYHLIATIPGTIAGIAAVLGLIGLIIRRVINKTVFLSTSRSDKVMYVLLGAAILSGFIATVSTQVFGGAHGYDYR ETISPWLRQLLIFNAQPELMADVPWEFKVHIVAGFTLIALWPFTRLVHAFSAPVGYVTRPYVVYRTRDTTSEPARQNVAW EPIRSVKNQLDNDSKWHGA
Sequences:
>Translated_259_residues MSNFETFLWVAYPWLCIAAYIIGISWRWRADQFGWTTHSSQIYESKLLRIASPLFHWGMVFVVIGHLMGLAIPKSWTQAV GISDAAYHLIATIPGTIAGIAAVLGLIGLIIRRVINKTVFLSTSRSDKVMYVLLGAAILSGFIATVSTQVFGGAHGYDYR ETISPWLRQLLIFNAQPELMADVPWEFKVHIVAGFTLIALWPFTRLVHAFSAPVGYVTRPYVVYRTRDTTSEPARQNVAW EPIRSVKNQLDNDSKWHGA >Mature_258_residues SNFETFLWVAYPWLCIAAYIIGISWRWRADQFGWTTHSSQIYESKLLRIASPLFHWGMVFVVIGHLMGLAIPKSWTQAVG ISDAAYHLIATIPGTIAGIAAVLGLIGLIIRRVINKTVFLSTSRSDKVMYVLLGAAILSGFIATVSTQVFGGAHGYDYRE TISPWLRQLLIFNAQPELMADVPWEFKVHIVAGFTLIALWPFTRLVHAFSAPVGYVTRPYVVYRTRDTTSEPARQNVAWE PIRSVKNQLDNDSKWHGA
Specific function: Does not seem to have nitrate reductase activity [H]
COG id: COG2181
COG function: function code C; Nitrate reductase gamma subunit
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the nitrate reductase gamma subunit family [H]
Homologues:
Organism=Escherichia coli, GI1787738, Length=225, Percent_Identity=32, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI1787480, Length=229, Percent_Identity=28.82096069869, Blast_Score=99, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020945 - InterPro: IPR006656 - InterPro: IPR006963 - InterPro: IPR006655 - InterPro: IPR003816 - InterPro: IPR003765 [H]
Pfam domain/function: PF00384 Molybdopterin; PF02613 Nitrate_red_del; PF02665 Nitrate_red_gam [H]
EC number: =1.7.99.4 [H]
Molecular weight: Translated: 29098; Mature: 28967
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNFETFLWVAYPWLCIAAYIIGISWRWRADQFGWTTHSSQIYESKLLRIASPLFHWGMV CCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH FVVIGHLMGLAIPKSWTQAVGISDAAYHLIATIPGTIAGIAAVLGLIGLIIRRVINKTVF HHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEE LSTSRSDKVMYVLLGAAILSGFIATVSTQVFGGAHGYDYRETISPWLRQLLIFNAQPELM EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHH ADVPWEFKVHIVAGFTLIALWPFTRLVHAFSAPVGYVTRPYVVYRTRDTTSEPARQNVAW HCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHCCCCH EPIRSVKNQLDNDSKWHGA HHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SNFETFLWVAYPWLCIAAYIIGISWRWRADQFGWTTHSSQIYESKLLRIASPLFHWGMV CCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH FVVIGHLMGLAIPKSWTQAVGISDAAYHLIATIPGTIAGIAAVLGLIGLIIRRVINKTVF HHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEE LSTSRSDKVMYVLLGAAILSGFIATVSTQVFGGAHGYDYRETISPWLRQLLIFNAQPELM EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHH ADVPWEFKVHIVAGFTLIALWPFTRLVHAFSAPVGYVTRPYVVYRTRDTTSEPARQNVAW HCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHCCCCH EPIRSVKNQLDNDSKWHGA HHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]