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The map label for this gene is narJ [H]

Identifier: 62390075

GI number: 62390075

Start: 1247973

End: 1248659

Strand: Reverse

Name: narJ [H]

Synonym: cg1342

Alternate gene names: 62390075

Gene position: 1248659-1247973 (Counterclockwise)

Preceding gene: 62390076

Following gene: 62390074

Centisome position: 38.04

GC content: 59.39

Gene sequence:

>687_bases
ATGCGCACCCATACTGGCAAAATTCCGGATCACTTTGTGCCTCGCATCTCCATGACGGAGGAGCAGCGGCGCGTGGTGTT
CATGCTGAATAGTTTGCTGTTGGATTATCCAGAGGAGGGATTCGTCGACAAGCTAAATGCCGTCGAGGCGCAGCTTGATG
TCCTTCCGCTCCCCGTCGCGGCGCACGTGGTCGAGTTCCTTGACGCGGCACGCGTCGCTGGGCTACGCGCCATGCAGGAA
GCCTACGTTGAGACCTTTGACCAGCGCCGACGCTGCTCACTGTTTCTCACCTACTACGCTGTGGGCGACACCCGGCAGCG
CGGCACGGCGATCCTCACCTTCCGTCAAACGCTGCAACAGCTCGGATTTGAATCCGAGCGCGACGAATTGCCCGACCACC
TCTGCGTCGTGCTTGAGGCCGCAGCGCTTGCTGATTCTTCGCTTTTCGACGCCGCCACCCAGGTGTTATCAGCTCACCGC
GACGGCATCGAAGTGTTGCGCGCAGCCCTCGACAACCTCGACTCGCCCTACAGATACCTGATCATGTCTTTGTGCCAGGC
ATTGCCAGAAATCGATGAAGAAACCGCCAACAGCTACATGGAGCTCATCCGCAGCGGTCCACCAGCAGAAATGGTGGGCA
TCGGCACGCCTCTACCGTTCCCCACCTCACAACCGGACATTCACTAG

Upstream 100 bases:

>100_bases
GCCTGTGGCACGGGAGCTCCCAGCGGCAAGGTGAGTCTGACCTCGTGGAACGTTGGCGAACGCCCCGCTGCGATGTTCCC
ACCAAGGAAGGACTAGGCGG

Downstream 100 bases:

>100_bases
GACACACTATGTCAAACTTTGAAACGTTCCTCTGGGTTGCCTACCCCTGGCTGTGTATCGCCGCCTACATCATCGGCATT
TCTTGGCGCTGGCGCGCCGA

Product: nitrate reductase delta chain

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MRTHTGKIPDHFVPRISMTEEQRRVVFMLNSLLLDYPEEGFVDKLNAVEAQLDVLPLPVAAHVVEFLDAARVAGLRAMQE
AYVETFDQRRRCSLFLTYYAVGDTRQRGTAILTFRQTLQQLGFESERDELPDHLCVVLEAAALADSSLFDAATQVLSAHR
DGIEVLRAALDNLDSPYRYLIMSLCQALPEIDEETANSYMELIRSGPPAEMVGIGTPLPFPTSQPDIH

Sequences:

>Translated_228_residues
MRTHTGKIPDHFVPRISMTEEQRRVVFMLNSLLLDYPEEGFVDKLNAVEAQLDVLPLPVAAHVVEFLDAARVAGLRAMQE
AYVETFDQRRRCSLFLTYYAVGDTRQRGTAILTFRQTLQQLGFESERDELPDHLCVVLEAAALADSSLFDAATQVLSAHR
DGIEVLRAALDNLDSPYRYLIMSLCQALPEIDEETANSYMELIRSGPPAEMVGIGTPLPFPTSQPDIH
>Mature_228_residues
MRTHTGKIPDHFVPRISMTEEQRRVVFMLNSLLLDYPEEGFVDKLNAVEAQLDVLPLPVAAHVVEFLDAARVAGLRAMQE
AYVETFDQRRRCSLFLTYYAVGDTRQRGTAILTFRQTLQQLGFESERDELPDHLCVVLEAAALADSSLFDAATQVLSAHR
DGIEVLRAALDNLDSPYRYLIMSLCQALPEIDEETANSYMELIRSGPPAEMVGIGTPLPFPTSQPDIH

Specific function: Does not seem to have nitrate reductase activity [H]

COG id: COG2180

COG function: function code C; Nitrate reductase delta subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the nitrate reductase gamma subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020945
- InterPro:   IPR006656
- InterPro:   IPR006963
- InterPro:   IPR006655
- InterPro:   IPR003816
- InterPro:   IPR003765 [H]

Pfam domain/function: PF00384 Molybdopterin; PF02613 Nitrate_red_del; PF02665 Nitrate_red_gam [H]

EC number: =1.7.99.4 [H]

Molecular weight: Translated: 25535; Mature: 25535

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTHTGKIPDHFVPRISMTEEQRRVVFMLNSLLLDYPEEGFVDKLNAVEAQLDVLPLPVA
CCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHH
AHVVEFLDAARVAGLRAMQEAYVETFDQRRRCSLFLTYYAVGDTRQRGTAILTFRQTLQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHH
LGFESERDELPDHLCVVLEAAALADSSLFDAATQVLSAHRDGIEVLRAALDNLDSPYRYL
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
IMSLCQALPEIDEETANSYMELIRSGPPAEMVGIGTPLPFPTSQPDIH
HHHHHHHHHCCCHHHHHHHHHHHHCCCCHHEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MRTHTGKIPDHFVPRISMTEEQRRVVFMLNSLLLDYPEEGFVDKLNAVEAQLDVLPLPVA
CCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHH
AHVVEFLDAARVAGLRAMQEAYVETFDQRRRCSLFLTYYAVGDTRQRGTAILTFRQTLQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHH
LGFESERDELPDHLCVVLEAAALADSSLFDAATQVLSAHRDGIEVLRAALDNLDSPYRYL
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
IMSLCQALPEIDEETANSYMELIRSGPPAEMVGIGTPLPFPTSQPDIH
HHHHHHHHHCCCHHHHHHHHHHHHCCCCHHEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]