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The map label for this gene is 62389145

Identifier: 62389145

GI number: 62389145

Start: 264597

End: 265679

Strand: Reverse

Name: 62389145

Synonym: cg0302

Alternate gene names: NA

Gene position: 265679-264597 (Counterclockwise)

Preceding gene: 161486723

Following gene: 62389144

Centisome position: 8.09

GC content: 55.86

Gene sequence:

>1083_bases
ATGAGCACCACTTCGGAATCACAAGATCACGCCGCAAGAATCGAAGCTGAGCGCCAAGAAGCTATTGAGGCGGCTCCTTT
TGTTTCCGTCAGCATTCAATCAAGTGGAATCCACCCATCGACTTCACGCATGGTCACCATTGATTTGGTAACGCTGTCCC
CTAATTTGGAGCCGGTGGAAACTTTTCATGCCGTGTTGGATTCCAAAACTGATCCTGGCCCCTTCCACCTTCATGGCGTG
ACAGAGGAAGAATTTGCCAGCGCTAAGCGTTTCGGCCAGATTTTGAAAAGCTTGGACCGCCTCATCGATGGTCGTACCCT
GTTGATCCACAATGCTGCGCGAAGTTGGGGCTTTATTGTTTCCGAAGCCAAGCGCGCTATGAATGATGCTGCGCGCGCCA
ATCGCAACAGCAATCGTGGAAATCGCCGTGGTGGTCGCGGACGCCGCAGGCAGCGCGTGGGGCACATCCCAAAGCCGCTG
GTGATCGTCGATACGCTTGCATCGGCGCGTCGACAAGCAATCGCTTTAGACGACGTGCGCATCCGGGGTGTCGCACACAC
CCTCGGCCTTGACGCGCCTGCAGCGGAGGCGTCGGTGGAACGCGCGCAGGTGTCGCACCGCCAGTTGTGCCGCGAAGAAA
CTTTGCTTGTGGCACGGCTTTATGGTGCGTTGAAGCAGTCAGGACCGCTGGCGGAAATCGATCCCCAGTCCTTGCGCGCC
GATAAGTTTGGTTTGCAACGCTCGATCATCCGGGTGCAGGCGCAGGAAGCTTCGCCAACGCTGGTCAACCCTGGTACGTA
TGAGCCGGGAAAGACGCTGATCGCTGGGATGGAAGTTGTGGTCGCGCCGGAAATTGAGATGGATCCGGACATCATTATCC
AAGCGTGCGTCGATGCAGATTTGTCCTATTCTGAGAAGCTCACCCGGCAAACCTCAGTGGTGGTGTGCAATCAAACCCGC
GACATTGACGGCAAAGCGATGCATGCCCAGCGTAAAGGAATTCCGCTGCTGTCCGATGTTGCCTTCTTAGCAGCTGTTAA
AAGGGTAAAAGAAGGGAAGAAAGTGGACGTCGAAAAGCGCTAG

Upstream 100 bases:

>100_bases
TGCCCGGGTATCCTATGGATTTGGTCATCTACAACCATCAACGACCATTTGCATGCCTTGAAATGCTGTGAAACCTCTCT
AAGCAACTAGAGTTGTAAAA

Downstream 100 bases:

>100_bases
TGCCACTTGCTTAACTAGACTCGTTTTTCATGAAGCTTTCACTGCCTGCACCCCTACGCCGTTTACGCAGCGCTGCCGCC
ATCATCTCAGCAAAAGTTGC

Product: DNA polymerase III subunit epsilon

Products: NA

Alternate protein names: DNA Polymerase III Epsilon Subunit; LOW QUALITY PROTEIN DNA Polymerase III Subunit Epsilon; DNA Polymerase III DnaQ; DNA Polymerase III; DNA Polymerase III Subunit Epsilon-Like 3-5' Exonuclease

Number of amino acids: Translated: 360; Mature: 359

Protein sequence:

>360_residues
MSTTSESQDHAARIEAERQEAIEAAPFVSVSIQSSGIHPSTSRMVTIDLVTLSPNLEPVETFHAVLDSKTDPGPFHLHGV
TEEEFASAKRFGQILKSLDRLIDGRTLLIHNAARSWGFIVSEAKRAMNDAARANRNSNRGNRRGGRGRRRQRVGHIPKPL
VIVDTLASARRQAIALDDVRIRGVAHTLGLDAPAAEASVERAQVSHRQLCREETLLVARLYGALKQSGPLAEIDPQSLRA
DKFGLQRSIIRVQAQEASPTLVNPGTYEPGKTLIAGMEVVVAPEIEMDPDIIIQACVDADLSYSEKLTRQTSVVVCNQTR
DIDGKAMHAQRKGIPLLSDVAFLAAVKRVKEGKKVDVEKR

Sequences:

>Translated_360_residues
MSTTSESQDHAARIEAERQEAIEAAPFVSVSIQSSGIHPSTSRMVTIDLVTLSPNLEPVETFHAVLDSKTDPGPFHLHGV
TEEEFASAKRFGQILKSLDRLIDGRTLLIHNAARSWGFIVSEAKRAMNDAARANRNSNRGNRRGGRGRRRQRVGHIPKPL
VIVDTLASARRQAIALDDVRIRGVAHTLGLDAPAAEASVERAQVSHRQLCREETLLVARLYGALKQSGPLAEIDPQSLRA
DKFGLQRSIIRVQAQEASPTLVNPGTYEPGKTLIAGMEVVVAPEIEMDPDIIIQACVDADLSYSEKLTRQTSVVVCNQTR
DIDGKAMHAQRKGIPLLSDVAFLAAVKRVKEGKKVDVEKR
>Mature_359_residues
STTSESQDHAARIEAERQEAIEAAPFVSVSIQSSGIHPSTSRMVTIDLVTLSPNLEPVETFHAVLDSKTDPGPFHLHGVT
EEEFASAKRFGQILKSLDRLIDGRTLLIHNAARSWGFIVSEAKRAMNDAARANRNSNRGNRRGGRGRRRQRVGHIPKPLV
IVDTLASARRQAIALDDVRIRGVAHTLGLDAPAAEASVERAQVSHRQLCREETLLVARLYGALKQSGPLAEIDPQSLRAD
KFGLQRSIIRVQAQEASPTLVNPGTYEPGKTLIAGMEVVVAPEIEMDPDIIIQACVDADLSYSEKLTRQTSVVVCNQTRD
IDGKAMHAQRKGIPLLSDVAFLAAVKRVKEGKKVDVEKR

Specific function: Unknown

COG id: COG0847

COG function: function code L; DNA polymerase III, epsilon subunit and related 3'-5' exonucleases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39384; Mature: 39253

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTSESQDHAARIEAERQEAIEAAPFVSVSIQSSGIHPSTSRMVTIDLVTLSPNLEPVE
CCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCEEEEEEEEECCCCCHHH
TFHAVLDSKTDPGPFHLHGVTEEEFASAKRFGQILKSLDRLIDGRTLLIHNAARSWGFIV
HHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHH
SEAKRAMNDAARANRNSNRGNRRGGRGRRRQRVGHIPKPLVIVDTLASARRQAIALDDVR
HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEHHHHHHHHHHEEEECCEE
IRGVAHTLGLDAPAAEASVERAQVSHRQLCREETLLVARLYGALKQSGPLAEIDPQSLRA
EEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
DKFGLQRSIIRVQAQEASPTLVNPGTYEPGKTLIAGMEVVVAPEIEMDPDIIIQACVDAD
HHHHHHHHHHEEEECCCCCCEECCCCCCCCHHHHCCCEEEEECCCCCCHHHHHHHHHCCC
LSYSEKLTRQTSVVVCNQTRDIDGKAMHAQRKGIPLLSDVAFLAAVKRVKEGKKVDVEKR
CCHHHHHHCCCEEEEECCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
STTSESQDHAARIEAERQEAIEAAPFVSVSIQSSGIHPSTSRMVTIDLVTLSPNLEPVE
CCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCEEEEEEEEECCCCCHHH
TFHAVLDSKTDPGPFHLHGVTEEEFASAKRFGQILKSLDRLIDGRTLLIHNAARSWGFIV
HHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHH
SEAKRAMNDAARANRNSNRGNRRGGRGRRRQRVGHIPKPLVIVDTLASARRQAIALDDVR
HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEHHHHHHHHHHEEEECCEE
IRGVAHTLGLDAPAAEASVERAQVSHRQLCREETLLVARLYGALKQSGPLAEIDPQSLRA
EEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
DKFGLQRSIIRVQAQEASPTLVNPGTYEPGKTLIAGMEVVVAPEIEMDPDIIIQACVDAD
HHHHHHHHHHEEEECCCCCCEECCCCCCCCHHHHCCCEEEEECCCCCCHHHHHHHHHCCC
LSYSEKLTRQTSVVVCNQTRDIDGKAMHAQRKGIPLLSDVAFLAAVKRVKEGKKVDVEKR
CCHHHHHHCCCEEEEECCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA