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The map label for this gene is ypdP [H]

Identifier: 62389131

GI number: 62389131

Start: 248555

End: 249307

Strand: Reverse

Name: ypdP [H]

Synonym: cg0286

Alternate gene names: 62389131

Gene position: 249307-248555 (Counterclockwise)

Preceding gene: 62389135

Following gene: 62389124

Centisome position: 7.59

GC content: 53.39

Gene sequence:

>753_bases
ATGGTTGTGGACGTGCAAAATCAATCACACACCCCAGAAACCCAGCCTCAACCTGGGCAGGGCGCAGCCAAGAAAACCCC
CGTTGCGTCCGGAAACTCCACGTTCATTCACATTCAGCCAAGCTTGTACCCCATTTTGCTGGCGCTGTTTGTTGCAGTCT
TTCTAATTTCAAATATCACCGCAACCAAGGGCGTAGAAATCGGCCCGTTGGTGACAGACGGTGCGTTCTTCCTCTTCCCC
ATCTCATATGTGTTGGGCGATGTTCTAGCCGAATGTTACGGCTTCAAATCCACTCGTCGTGCCATTCTTACTGGTTTTGG
CATCACGATGCTCGCGGCGCTGTCTTTCTACATTTCCATCTGGCTGCCTGGCGCAAGTTTCTGGGAAGGCCAAGAAGCTT
TCGAAGCAACGCTCGGCCTTGTTCCACAGATCATCGTGGCATCACTGGCGGGCTATATTGTGGGTCAGCTGCTCAACGCC
AAAGTTCTGGTGGCTATCAAAAAGCGCACGGGTGAAAAGTCCCTGTGGGCGCGCCTGATTGGTTCCACCGTTGTCGGAGA
ATTTGTCGATACCCTGCTGTTTTGCGCCATCGCAGCGCCAGTGATCGGTATTGCCACCGCCCCGGATTTCATCAACTACG
TTGTGGTGGGCTTCGTGTGGAAAACCCTTCTAGAGGTCATCCTCATGCCCATCACCTACGCAGTCATTAGGTGGGTGAAA
CGCCGCGAAGGTTATGAAACCTTCGACGCGTAG

Upstream 100 bases:

>100_bases
GAAGTGTCTGGCCGATTGGCTAACAATCTCTAGTTAAATCCCGCCTCATGAAACCACGATGAAACCAACATGAGAGTTTT
TTCATCCACGTTTTCTGGCT

Downstream 100 bases:

>100_bases
TACCGGCCTAAGAATTCTTCCTTGAATTCGTAGTACGTGCCATCATCGATGCTGGCACGAATCTTATCCACCAAGGTGAT
CATGAAGTGCAGATTGTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MVVDVQNQSHTPETQPQPGQGAAKKTPVASGNSTFIHIQPSLYPILLALFVAVFLISNITATKGVEIGPLVTDGAFFLFP
ISYVLGDVLAECYGFKSTRRAILTGFGITMLAALSFYISIWLPGASFWEGQEAFEATLGLVPQIIVASLAGYIVGQLLNA
KVLVAIKKRTGEKSLWARLIGSTVVGEFVDTLLFCAIAAPVIGIATAPDFINYVVVGFVWKTLLEVILMPITYAVIRWVK
RREGYETFDA

Sequences:

>Translated_250_residues
MVVDVQNQSHTPETQPQPGQGAAKKTPVASGNSTFIHIQPSLYPILLALFVAVFLISNITATKGVEIGPLVTDGAFFLFP
ISYVLGDVLAECYGFKSTRRAILTGFGITMLAALSFYISIWLPGASFWEGQEAFEATLGLVPQIIVASLAGYIVGQLLNA
KVLVAIKKRTGEKSLWARLIGSTVVGEFVDTLLFCAIAAPVIGIATAPDFINYVVVGFVWKTLLEVILMPITYAVIRWVK
RREGYETFDA
>Mature_250_residues
MVVDVQNQSHTPETQPQPGQGAAKKTPVASGNSTFIHIQPSLYPILLALFVAVFLISNITATKGVEIGPLVTDGAFFLFP
ISYVLGDVLAECYGFKSTRRAILTGFGITMLAALSFYISIWLPGASFWEGQEAFEATLGLVPQIIVASLAGYIVGQLLNA
KVLVAIKKRTGEKSLWARLIGSTVVGEFVDTLLFCAIAAPVIGIATAPDFINYVVVGFVWKTLLEVILMPITYAVIRWVK
RREGYETFDA

Specific function: Unknown

COG id: COG1738

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003744 [H]

Pfam domain/function: PF02592 DUF165 [H]

EC number: NA

Molecular weight: Translated: 27076; Mature: 27076

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVDVQNQSHTPETQPQPGQGAAKKTPVASGNSTFIHIQPSLYPILLALFVAVFLISNIT
CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCH
ATKGVEIGPLVTDGAFFLFPISYVLGDVLAECYGFKSTRRAILTGFGITMLAALSFYISI
HCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
WLPGASFWEGQEAFEATLGLVPQIIVASLAGYIVGQLLNAKVLVAIKKRTGEKSLWARLI
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEHHCCCHHHHHHHHH
GSTVVGEFVDTLLFCAIAAPVIGIATAPDFINYVVVGFVWKTLLEVILMPITYAVIRWVK
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RREGYETFDA
HHCCCCCCCC
>Mature Secondary Structure
MVVDVQNQSHTPETQPQPGQGAAKKTPVASGNSTFIHIQPSLYPILLALFVAVFLISNIT
CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCH
ATKGVEIGPLVTDGAFFLFPISYVLGDVLAECYGFKSTRRAILTGFGITMLAALSFYISI
HCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
WLPGASFWEGQEAFEATLGLVPQIIVASLAGYIVGQLLNAKVLVAIKKRTGEKSLWARLI
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEHHCCCHHHHHHHHH
GSTVVGEFVDTLLFCAIAAPVIGIATAPDFINYVVVGFVWKTLLEVILMPITYAVIRWVK
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RREGYETFDA
HHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]