Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
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Accession | NC_006958 |
Length | 3,282,708 |
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The map label for this gene is 62389135
Identifier: 62389135
GI number: 62389135
Start: 252828
End: 253820
Strand: Reverse
Name: 62389135
Synonym: cg0291
Alternate gene names: NA
Gene position: 253820-252828 (Counterclockwise)
Preceding gene: 62389136
Following gene: 62389131
Centisome position: 7.73
GC content: 53.58
Gene sequence:
>993_bases ATGGCTGAGCAGTTGCGTCAATTTGAAGGCAGGGTCCTCCCTAATCAATCCGAGGACTTGGAAGATCAGGGTTTGGGATT TGACCTGGGAACCGTTTTCTCCCGCAGGAAGGTTTTGGGATTCATCGGTGTTGGTGGAGCAGGTGTGGCACTTGCTGCTT GTTCACCTTCTGGTTCTTCCGCGGCATCGAGCACCTCAAGCGCGTCCAGCAGCGCAGCTGCAACCACCAGTGCAGCAGCA GAGACTTTGACTGAGATGAAGTCGGAGACTGCTGGTCCGTACCCGGGCGATGGTTCGAATGGTCCGGATGTGTTGGAGGT CTCCGGTGTGGAGCGCCAGGACATCACCAAGTCGATTGATTCTGACACCGTGGCAGAGGGCGTACCTCTGACGTTGACTA TGACCATTTTGGACATGAACAACAACAATCAGCCAATGGAGGGTGCTGCGGTGTACGTGTGGCACTGTGATGCGCCGGGT CGATATTCGATGTACGACTCTGAGCTGGAAGATGAGACCTATTTACGCGGTGTGCAGATTACCGATAAGTATGGCCAGGT CACGTTCGATACCATTTTCCCTGGTTGTTATGCGGGCCGTTGGGTGCATATTCATTTCGAGGTGTTCCCGGATCGAGACA GCATCACGGATTCCACGAACAACATTTTGACGTCGCAGATTGCCTTGGATGAAGCATCAGCAGCATCGGTGTATGCACTT GATGTGTATGGAGATTCTTTGACCAACCTCAATAACATCACGTTGGAGTCGGACAATGTCTTCTCCGATGGTTGGGATCA GCAGATGGCTAACCTGACCGGTGATGCTACCAGCGGTTTCATTGCCTCGATTGATGTGCCGATTGATCCAACCACGGAAC AGAATCAGTCCATGAACATGCCAAGTGGAGGCCAGGGAGGCCCCGGTGGACAAGGAGGACCAGGCGGCATGACTCCTCCA GATGGAATGACCCCTCCCTCTGAGCCTCAGTAA
Upstream 100 bases:
>100_bases TAGAAAAATCTACCCAGTAAGCATTCAGGAACCATTCAGAATCTTTTCTTAGCATGTCTCTATCAGCGTAAACGTCCGAA CATGAAAGGCTAGAAAAGCC
Downstream 100 bases:
>100_bases ATAAACGGCTCCCGGCTGAGGGTTGTGGGGTCGAAAATTTCCAACAATTGGGGTGCGGAATTTACCCCTTCGTAGCCGAG CGATGATGCGAGGCGGGAGA
Product: 3,4-dioxygenase beta subunit
Products: NA
Alternate protein names: Protocatechuate Dioxygenase; Twin-Arginine Translocation Pathway Signal; Dioxygenase; Protocatechuate 3 4-Dioxygenase; Catechol 1 2-Dioxygenase; Dioxygenase Subfamily Protein; Protocatechuate 3 4-Dioxygenase Beta Subunit Like Protein; Intradiol-Dioxygenase-Like Protein; Protocatechuate 3 4-Dioxygenase Subunit Beta; Protocatechuate 3 4-Dioxygenase Beta Subunit; Intradiol Dioxygenase
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MAEQLRQFEGRVLPNQSEDLEDQGLGFDLGTVFSRRKVLGFIGVGGAGVALAACSPSGSSAASSTSSASSSAAATTSAAA ETLTEMKSETAGPYPGDGSNGPDVLEVSGVERQDITKSIDSDTVAEGVPLTLTMTILDMNNNNQPMEGAAVYVWHCDAPG RYSMYDSELEDETYLRGVQITDKYGQVTFDTIFPGCYAGRWVHIHFEVFPDRDSITDSTNNILTSQIALDEASAASVYAL DVYGDSLTNLNNITLESDNVFSDGWDQQMANLTGDATSGFIASIDVPIDPTTEQNQSMNMPSGGQGGPGGQGGPGGMTPP DGMTPPSEPQ
Sequences:
>Translated_330_residues MAEQLRQFEGRVLPNQSEDLEDQGLGFDLGTVFSRRKVLGFIGVGGAGVALAACSPSGSSAASSTSSASSSAAATTSAAA ETLTEMKSETAGPYPGDGSNGPDVLEVSGVERQDITKSIDSDTVAEGVPLTLTMTILDMNNNNQPMEGAAVYVWHCDAPG RYSMYDSELEDETYLRGVQITDKYGQVTFDTIFPGCYAGRWVHIHFEVFPDRDSITDSTNNILTSQIALDEASAASVYAL DVYGDSLTNLNNITLESDNVFSDGWDQQMANLTGDATSGFIASIDVPIDPTTEQNQSMNMPSGGQGGPGGQGGPGGMTPP DGMTPPSEPQ >Mature_329_residues AEQLRQFEGRVLPNQSEDLEDQGLGFDLGTVFSRRKVLGFIGVGGAGVALAACSPSGSSAASSTSSASSSAAATTSAAAE TLTEMKSETAGPYPGDGSNGPDVLEVSGVERQDITKSIDSDTVAEGVPLTLTMTILDMNNNNQPMEGAAVYVWHCDAPGR YSMYDSELEDETYLRGVQITDKYGQVTFDTIFPGCYAGRWVHIHFEVFPDRDSITDSTNNILTSQIALDEASAASVYALD VYGDSLTNLNNITLESDNVFSDGWDQQMANLTGDATSGFIASIDVPIDPTTEQNQSMNMPSGGQGGPGGQGGPGGMTPPD GMTPPSEPQ
Specific function: Unknown
COG id: COG3485
COG function: function code Q; Protocatechuate 3,4-dioxygenase beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34599; Mature: 34468
Theoretical pI: Translated: 3.72; Mature: 3.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEQLRQFEGRVLPNQSEDLEDQGLGFDLGTVFSRRKVLGFIGVGGAGVALAACSPSGSS CCHHHHHHCCCCCCCCCCCCHHCCCCCCHHHHHHHCEEEEEEECCCCCEEEEEECCCCCC AASSTSSASSSAAATTSAAAETLTEMKSETAGPYPGDGSNGPDVLEVSGVERQDITKSID CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHCC SDTVAEGVPLTLTMTILDMNNNNQPMEGAAVYVWHCDAPGRYSMYDSELEDETYLRGVQI CCHHHCCCCEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHEEEEE TDKYGQVTFDTIFPGCYAGRWVHIHFEVFPDRDSITDSTNNILTSQIALDEASAASVYAL ECCCCCEEEEHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCEEEEE DVYGDSLTNLNNITLESDNVFSDGWDQQMANLTGDATSGFIASIDVPIDPTTEQNQSMNM EECCCCCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCC PSGGQGGPGGQGGPGGMTPPDGMTPPSEPQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AEQLRQFEGRVLPNQSEDLEDQGLGFDLGTVFSRRKVLGFIGVGGAGVALAACSPSGSS CHHHHHHCCCCCCCCCCCCHHCCCCCCHHHHHHHCEEEEEEECCCCCEEEEEECCCCCC AASSTSSASSSAAATTSAAAETLTEMKSETAGPYPGDGSNGPDVLEVSGVERQDITKSID CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHCC SDTVAEGVPLTLTMTILDMNNNNQPMEGAAVYVWHCDAPGRYSMYDSELEDETYLRGVQI CCHHHCCCCEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHEEEEE TDKYGQVTFDTIFPGCYAGRWVHIHFEVFPDRDSITDSTNNILTSQIALDEASAASVYAL ECCCCCEEEEHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCEEEEE DVYGDSLTNLNNITLESDNVFSDGWDQQMANLTGDATSGFIASIDVPIDPTTEQNQSMNM EECCCCCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCC PSGGQGGPGGQGGPGGMTPPDGMTPPSEPQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA