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The map label for this gene is iolB [H]

Identifier: 62389055

GI number: 62389055

Start: 172469

End: 173359

Strand: Direct

Name: iolB [H]

Synonym: cg0201

Alternate gene names: 62389055

Gene position: 172469-173359 (Clockwise)

Preceding gene: 62389054

Following gene: 62389056

Centisome position: 5.25

GC content: 55.33

Gene sequence:

>891_bases
ATGCGTTGGTTCCATAAGAAGGGCGAACTGGCCCGAGATGGTTGGCAAAGCGTTGTCGATGCCACCACCCCAGGTTGGGA
ATATACCGGCATCCGCATTGCCGAACTGGGCAGTGGTGAATCGCTTGAACTGAATGACACTGGTGTGGAACGCATCTTCA
TTCCACTTCAGGGCAGCTTCGATGTTGCCCACCATGGTCAGGTGACCCATCTTCACGGAAGAAAGTCAGTCTTTGATGGA
CCAACCGATGTGCTCTACCTCCCCACTGGACAAACAGCAACGCTCAGTGGTCAGGGACGAGTCGCCGTGGCGGAAGCTCC
CACTCAGGAACCCAAGGAGTGGAAGTACATCGCTCCAGCAGAAACTCCTGTGGAGTTGCGTGGAGCTGGCCGCTCGAGCC
GACAAGTCCACAACTTTGGCACCCCGGAAGCTCTCGATGCTGCTCGACTAATCGTGTGTGAAGTAATCACCCCAGGTGAA
AACTGGAGCTCTTACCCTCCACACAAGCATGATGAGCACATCCCAGGACACGAGTCCAAGCTGGAGGAAATCTACTACTT
CGAAAGCGCCCCATCGCGAGTTGGTGGCAGGGCCGAAGCAGCAGAAGGAGCTTTCGGAATGTTTTCCACCTACTCCTCAC
CAGCGGGGGAGATCGATATCAACGCCATGGTGTACAGCGGCGATATCGCGCTAGTTCCTTTCGGATACCACGGCCCTGCC
GTGGCAGCACCTGGCTATGACTTGTACTACCTCAACGTCATGGCAGGACCTGATCCGGAGAGAATCTGGCTGATTAACGA
TGACCCAGCGCACGCCTGGGTTCGAGATACATGGACCGGGCAAGCATTTGATGATCGCTTGCCATATGAGAACGCAAACA
AGGAGGGATAA

Upstream 100 bases:

>100_bases
GGGAAAAGGCGATCACCAGCCGTTGGCTCGACCCAGCAACCCACGGTGGCATTAACCTCGGTTTCCCACAGAACGATTAA
TTGAAGGAGAGCACAGGACT

Downstream 100 bases:

>100_bases
AATTTCATGGCTGAAACGAAGAGAATGACAGTTAGCCAGGCACTGGTTGAATTCCTTGGTCACCAGTGGACTGTCGACGG
CGATATCCGCGAGCGCACCA

Product: hypothetical protein

Products: NA

Alternate protein names: 5DG isomerase [H]

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MRWFHKKGELARDGWQSVVDATTPGWEYTGIRIAELGSGESLELNDTGVERIFIPLQGSFDVAHHGQVTHLHGRKSVFDG
PTDVLYLPTGQTATLSGQGRVAVAEAPTQEPKEWKYIAPAETPVELRGAGRSSRQVHNFGTPEALDAARLIVCEVITPGE
NWSSYPPHKHDEHIPGHESKLEEIYYFESAPSRVGGRAEAAEGAFGMFSTYSSPAGEIDINAMVYSGDIALVPFGYHGPA
VAAPGYDLYYLNVMAGPDPERIWLINDDPAHAWVRDTWTGQAFDDRLPYENANKEG

Sequences:

>Translated_296_residues
MRWFHKKGELARDGWQSVVDATTPGWEYTGIRIAELGSGESLELNDTGVERIFIPLQGSFDVAHHGQVTHLHGRKSVFDG
PTDVLYLPTGQTATLSGQGRVAVAEAPTQEPKEWKYIAPAETPVELRGAGRSSRQVHNFGTPEALDAARLIVCEVITPGE
NWSSYPPHKHDEHIPGHESKLEEIYYFESAPSRVGGRAEAAEGAFGMFSTYSSPAGEIDINAMVYSGDIALVPFGYHGPA
VAAPGYDLYYLNVMAGPDPERIWLINDDPAHAWVRDTWTGQAFDDRLPYENANKEG
>Mature_296_residues
MRWFHKKGELARDGWQSVVDATTPGWEYTGIRIAELGSGESLELNDTGVERIFIPLQGSFDVAHHGQVTHLHGRKSVFDG
PTDVLYLPTGQTATLSGQGRVAVAEAPTQEPKEWKYIAPAETPVELRGAGRSSRQVHNFGTPEALDAARLIVCEVITPGE
NWSSYPPHKHDEHIPGHESKLEEIYYFESAPSRVGGRAEAAEGAFGMFSTYSSPAGEIDINAMVYSGDIALVPFGYHGPA
VAAPGYDLYYLNVMAGPDPERIWLINDDPAHAWVRDTWTGQAFDDRLPYENANKEG

Specific function: Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D- gluconate) [H]

COG id: COG3718

COG function: function code G; Uncharacterized enzyme involved in inositol metabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isomerase iolB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR021120
- InterPro:   IPR014710 [H]

Pfam domain/function: PF04962 KduI [H]

EC number: NA

Molecular weight: Translated: 32505; Mature: 32505

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWFHKKGELARDGWQSVVDATTPGWEYTGIRIAELGSGESLELNDTGVERIFIPLQGSF
CCCCCCCCCHHHHHHHHHHHCCCCCCEECCEEEEECCCCCEEEECCCCCEEEEEEECCCC
DVAHHGQVTHLHGRKSVFDGPTDVLYLPTGQTATLSGQGRVAVAEAPTQEPKEWKYIAPA
CCCCCCEEEEECCCCCCCCCCCCEEEECCCCEEEECCCCCEEEECCCCCCCCCCEEECCC
ETPVELRGAGRSSRQVHNFGTPEALDAARLIVCEVITPGENWSSYPPHKHDEHIPGHESK
CCCEEEECCCCCCCEECCCCCCHHHHHEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHH
LEEIYYFESAPSRVGGRAEAAEGAFGMFSTYSSPAGEIDINAMVYSGDIALVPFGYHGPA
HEEEEEECCCCCCCCCCCHHCCCCEEEEECCCCCCCCEEEEEEEEECCEEEEEECCCCCE
VAAPGYDLYYLNVMAGPDPERIWLINDDPAHAWVRDTWTGQAFDDRLPYENANKEG
EECCCCEEEEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRWFHKKGELARDGWQSVVDATTPGWEYTGIRIAELGSGESLELNDTGVERIFIPLQGSF
CCCCCCCCCHHHHHHHHHHHCCCCCCEECCEEEEECCCCCEEEECCCCCEEEEEEECCCC
DVAHHGQVTHLHGRKSVFDGPTDVLYLPTGQTATLSGQGRVAVAEAPTQEPKEWKYIAPA
CCCCCCEEEEECCCCCCCCCCCCEEEECCCCEEEECCCCCEEEECCCCCCCCCCEEECCC
ETPVELRGAGRSSRQVHNFGTPEALDAARLIVCEVITPGENWSSYPPHKHDEHIPGHESK
CCCEEEECCCCCCCEECCCCCCHHHHHEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHH
LEEIYYFESAPSRVGGRAEAAEGAFGMFSTYSSPAGEIDINAMVYSGDIALVPFGYHGPA
HEEEEEECCCCCCCCCCCHHCCCCEEEEECCCCCCCCEEEEEEEEECCEEEEEECCCCCE
VAAPGYDLYYLNVMAGPDPERIWLINDDPAHAWVRDTWTGQAFDDRLPYENANKEG
EECCCCEEEEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA