| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59711500
Identifier: 59711500
GI number: 59711500
Start: 983064
End: 983576
Strand: Reverse
Name: 59711500
Synonym: VF_0893
Alternate gene names: NA
Gene position: 983576-983064 (Counterclockwise)
Preceding gene: 59711501
Following gene: 59711499
Centisome position: 33.95
GC content: 37.82
Gene sequence:
>513_bases ATGAAACTTGCCGCTCTAATCTTACCTTTTGCATTGCTTACGACCTCAGCTCAAGCTGCAGATACTCAATGTTTAAGCGA CAAATACAGTCAATATGTAGATGCATCTTTAACTTGGTATCAAGAGCTCATTGCCATTACCGTGAAAAAAGATCCAAACC TACAAAGTGTTGGTGACTGGTTCCTTGAAGGACGCAAACATCACTTTGAACTGAACCGTGCTGCAGTGAATTACTATCTT GAAAATGCACCTGAAAAGGTTAAAACAAATCAATCAATAGAATCGTGGTTACAACTTTCTCAAAAAGAAGTGAAAGAATT AGCAAGCCATGATGACGAGCTAGGTAAAATCGCCAAAGCAACGTTTGATGACCGTCAATCTCAACCTCATAAACAAAATT ATGAATTGCGTTCTGCGTTTGCAGACATCTTAAGTCATCCAAAAACAATTGACGTTCCACTGAAAGCCTACAATCAAAAA ATGAGCGAGATCAGTATTATTAAATGCCAATAA
Upstream 100 bases:
>100_bases AAGTGGGAAACATCACACTGTGAATCGTTTCAATTGCATTTAGTTACACTCTATTTACAATCACAAATTGATAATTACGA TTCATTTATAAGGATTTAAA
Downstream 100 bases:
>100_bases TATTGATTAATTTATCACCATTCATTCATTTTTGGTGGTAAATCCCCCCTTCAAGACTCAATGAGGCACATTTTACACAA GACATTTTCGTCATTTTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MKLAALILPFALLTTSAQAADTQCLSDKYSQYVDASLTWYQELIAITVKKDPNLQSVGDWFLEGRKHHFELNRAAVNYYL ENAPEKVKTNQSIESWLQLSQKEVKELASHDDELGKIAKATFDDRQSQPHKQNYELRSAFADILSHPKTIDVPLKAYNQK MSEISIIKCQ
Sequences:
>Translated_170_residues MKLAALILPFALLTTSAQAADTQCLSDKYSQYVDASLTWYQELIAITVKKDPNLQSVGDWFLEGRKHHFELNRAAVNYYL ENAPEKVKTNQSIESWLQLSQKEVKELASHDDELGKIAKATFDDRQSQPHKQNYELRSAFADILSHPKTIDVPLKAYNQK MSEISIIKCQ >Mature_170_residues MKLAALILPFALLTTSAQAADTQCLSDKYSQYVDASLTWYQELIAITVKKDPNLQSVGDWFLEGRKHHFELNRAAVNYYL ENAPEKVKTNQSIESWLQLSQKEVKELASHDDELGKIAKATFDDRQSQPHKQNYELRSAFADILSHPKTIDVPLKAYNQK MSEISIIKCQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19401; Mature: 19401
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLAALILPFALLTTSAQAADTQCLSDKYSQYVDASLTWYQELIAITVKKDPNLQSVGDW CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH FLEGRKHHFELNRAAVNYYLENAPEKVKTNQSIESWLQLSQKEVKELASHDDELGKIAKA HHHCCHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH TFDDRQSQPHKQNYELRSAFADILSHPKTIDVPLKAYNQKMSEISIIKCQ HHHHHCCCCCCCCHHHHHHHHHHHCCCCEECCCHHHHHHHHHHEEEEECC >Mature Secondary Structure MKLAALILPFALLTTSAQAADTQCLSDKYSQYVDASLTWYQELIAITVKKDPNLQSVGDW CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH FLEGRKHHFELNRAAVNYYLENAPEKVKTNQSIESWLQLSQKEVKELASHDDELGKIAKA HHHCCHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH TFDDRQSQPHKQNYELRSAFADILSHPKTIDVPLKAYNQKMSEISIIKCQ HHHHHCCCCCCCCHHHHHHHHHHHCCCCEECCCHHHHHHHHHHEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA