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The map label for this gene is secF [H]

Identifier: 59711481

GI number: 59711481

Start: 958466

End: 959365

Strand: Reverse

Name: secF [H]

Synonym: VF_0874

Alternate gene names: 59711481

Gene position: 959365-958466 (Counterclockwise)

Preceding gene: 59711482

Following gene: 59711479

Centisome position: 33.11

GC content: 43.56

Gene sequence:

>900_bases
ATGTTTATAAATATGAAAAATGCAACAAAATGGCGTCACATGACGAGTGTGGTTTCGGTATGTTTAATGATTTTTGCATT
AACGATGATCGCAACCAAAGGCCTTAACTGGGGCTTGGATTTTACTGGCGGTATCGTGAGTGAAGTTCAACTGGATAGCA
AAATCACCAACAGTGAAATTGCACCATTATTGGATGCCGGCTTTAAACAAGATGTTGCTGTTATTGCCTCTGGTGAGCCG
GGTCGTTGGGTTCTGCGTTATGCGATTCCACCACATGGTACTGAACTTCCACCACTGACTGAGGTACTTGCTCCTCTGCA
TACCGATGTTCAAGTATTAAATACCAGTATCGTTGGTCCACAAGTAGGCCAAGAGCTAACTGAACAAGGTGGCATGGCAT
TATTGGTGTCGGTTTTGGTTATCTTAGCGTATTTAAGCTACCGTTTTGAATGGCGTTTGGCTTCTGGCTCTCTGTTTGCC
CTAACCCACGATATCGTGTTTGTACTTGGTTTCTTTGCTGCGACTCAAATGGAGTTTAACTTAACCACCCTAGCCGCTAT
TTTGGCGATTTTAGGTTACTCGTTAAATGACTCTATCATCATTGCAGATAGGATCCGTGAGCTGTTAATTGCCAAGCCTG
AGTTATCTATCCAAGAGATCAATAACGAGGCAGTTGCGGCAACCTTCTCTCGTACTATGGTGACATCAGGTACTACCCTA
ATCACTGTTGGTTCTTTATGGTTATTAGGTGGCGGTCCACTAGAGGGCTTTGCGATTGCGATGTTCATCGGTATCGTAAC
AGGTACTTGGTCTTCTATCTCGGTAGGTACAAGTTTACCTGAGTACTTTGGTTTGAATTCAGAGCACTACAAGCCAAAAC
CAATTTCTGAAGAGCCGTAA

Upstream 100 bases:

>100_bases
AGGTCTATTAACCAGTATGTTCACCGGCATCTTCGCTTCACGTGCCATTATCAATTTAGTTTGGGGTCGTGATTCTCGTC
ATGATGTTAGGGTTTAAGTT

Downstream 100 bases:

>100_bases
GAGTTAGGTTTAGATAGATAGTAAAAAGCCGCAGGGAATGCGGCTTGATGTTGGGGGATCTGGTTTAGGCTAGATCCCTT
TTTTGTGGGTGCTGTTACGC

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MFINMKNATKWRHMTSVVSVCLMIFALTMIATKGLNWGLDFTGGIVSEVQLDSKITNSEIAPLLDAGFKQDVAVIASGEP
GRWVLRYAIPPHGTELPPLTEVLAPLHTDVQVLNTSIVGPQVGQELTEQGGMALLVSVLVILAYLSYRFEWRLASGSLFA
LTHDIVFVLGFFAATQMEFNLTTLAAILAILGYSLNDSIIIADRIRELLIAKPELSIQEINNEAVAATFSRTMVTSGTTL
ITVGSLWLLGGGPLEGFAIAMFIGIVTGTWSSISVGTSLPEYFGLNSEHYKPKPISEEP

Sequences:

>Translated_299_residues
MFINMKNATKWRHMTSVVSVCLMIFALTMIATKGLNWGLDFTGGIVSEVQLDSKITNSEIAPLLDAGFKQDVAVIASGEP
GRWVLRYAIPPHGTELPPLTEVLAPLHTDVQVLNTSIVGPQVGQELTEQGGMALLVSVLVILAYLSYRFEWRLASGSLFA
LTHDIVFVLGFFAATQMEFNLTTLAAILAILGYSLNDSIIIADRIRELLIAKPELSIQEINNEAVAATFSRTMVTSGTTL
ITVGSLWLLGGGPLEGFAIAMFIGIVTGTWSSISVGTSLPEYFGLNSEHYKPKPISEEP
>Mature_299_residues
MFINMKNATKWRHMTSVVSVCLMIFALTMIATKGLNWGLDFTGGIVSEVQLDSKITNSEIAPLLDAGFKQDVAVIASGEP
GRWVLRYAIPPHGTELPPLTEVLAPLHTDVQVLNTSIVGPQVGQELTEQGGMALLVSVLVILAYLSYRFEWRLASGSLFA
LTHDIVFVLGFFAATQMEFNLTTLAAILAILGYSLNDSIIIADRIRELLIAKPELSIQEINNEAVAATFSRTMVTSGTTL
ITVGSLWLLGGGPLEGFAIAMFIGIVTGTWSSISVGTSLPEYFGLNSEHYKPKPISEEP

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=306, Percent_Identity=37.2549019607843, Blast_Score=191, Evalue=5e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 32345; Mature: 32345

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS00136 SUBTILASE_ASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFINMKNATKWRHMTSVVSVCLMIFALTMIATKGLNWGLDFTGGIVSEVQLDSKITNSEI
CEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEECCCCCCCCHH
APLLDAGFKQDVAVIASGEPGRWVLRYAIPPHGTELPPLTEVLAPLHTDVQVLNTSIVGP
HHHHHCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHCCCH
QVGQELTEQGGMALLVSVLVILAYLSYRFEWRLASGSLFALTHDIVFVLGFFAATQMEFN
HHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEEECCCCEEHHHHHHHHHHHHHHHHHCCCH
LTTLAAILAILGYSLNDSIIIADRIRELLIAKPELSIQEINNEAVAATFSRTMVTSGTTL
HHHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHCCCCEE
ITVGSLWLLGGGPLEGFAIAMFIGIVTGTWSSISVGTSLPEYFGLNSEHYKPKPISEEP
EEECCEEEECCCCHHHHHHHHHHHHHHCCCCCEECCCCCHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFINMKNATKWRHMTSVVSVCLMIFALTMIATKGLNWGLDFTGGIVSEVQLDSKITNSEI
CEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEECCCCCCCCHH
APLLDAGFKQDVAVIASGEPGRWVLRYAIPPHGTELPPLTEVLAPLHTDVQVLNTSIVGP
HHHHHCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHCCCH
QVGQELTEQGGMALLVSVLVILAYLSYRFEWRLASGSLFALTHDIVFVLGFFAATQMEFN
HHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEEECCCCEEHHHHHHHHHHHHHHHHHCCCH
LTTLAAILAILGYSLNDSIIIADRIRELLIAKPELSIQEINNEAVAATFSRTMVTSGTTL
HHHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHCCCCEE
ITVGSLWLLGGGPLEGFAIAMFIGIVTGTWSSISVGTSLPEYFGLNSEHYKPKPISEEP
EEECCEEEECCCCHHHHHHHHHHHHHHCCCCCEECCCCCHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]