Click here to switch to the map view.

The map label for this gene is 59711474

Identifier: 59711474

GI number: 59711474

Start: 952859

End: 953482

Strand: Reverse

Name: 59711474

Synonym: VF_0867

Alternate gene names: NA

Gene position: 953482-952859 (Counterclockwise)

Preceding gene: 59711476

Following gene: 59711473

Centisome position: 32.91

GC content: 43.27

Gene sequence:

>624_bases
ATGAATAAATCTCTTTTAGCCGTTGTAGTATCAGGTGCTTTATTGCTGTCTGGTTGTTCTTCTTCAAGCGACTCTAGTGG
CTCTGGACAAACGAACCCTGGTAATCCTGTTATTCCTGATATTGATAACTCTCCAGAGTGGGGTTTAGATGTTGGTGATA
CTCCTGATTGGGGACTCGCTGATCCTGAGTTTGGTCTACCTGTACCATCGATTCCAGACATCGATAACACACCTGATTGG
GGATTAGACACTGGGAATACACCAGATCGACTACCTCCTGTATGGGGCGGCCCTGAAATGCCACCAATTGATAATGGTCC
AGAGGCAAGCTACACGATTTCAGGAAGCACTATTACAGATACAAATGGCAATATATTCGTTATTAAGAACGTTGACTGGC
ATGGTCAGTCTATGATTGTTCAAGACCAAGACGGTAATGACCATTACGTAAGTATCATTCGCCAAGGCGACTATGAAGGT
GACTTTGGAATTGTTATTGATGGTGAATCCATCATCATTGGTGGTGATACTGTTCAAGGTGGTTTAAGACCATTTATGGA
AAATTCAAGCCCAGAGATAGACCGTAACACTATCCGTGACTCAATTCGCGCTCGCTTAAACTAA

Upstream 100 bases:

>100_bases
CAAAAAAGTCTCTGTCATTGCGCCAAAGGAAAGGGTGATATTTTCTGCACTGACCAATTGAAGAGTCAGTAAATTTTGAT
AAGACTTTAGGTGATACATT

Downstream 100 bases:

>100_bases
TGTTCCCTCGCTCCTAGTTACGTACTAGGAGCACCTTTCTAGGTTATCACATGAAAACCATTTCAATGACTTGCAGCGCA
ATGATGCTCTGTACTTCAGC

Product: putative lipoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MNKSLLAVVVSGALLLSGCSSSSDSSGSGQTNPGNPVIPDIDNSPEWGLDVGDTPDWGLADPEFGLPVPSIPDIDNTPDW
GLDTGNTPDRLPPVWGGPEMPPIDNGPEASYTISGSTITDTNGNIFVIKNVDWHGQSMIVQDQDGNDHYVSIIRQGDYEG
DFGIVIDGESIIIGGDTVQGGLRPFMENSSPEIDRNTIRDSIRARLN

Sequences:

>Translated_207_residues
MNKSLLAVVVSGALLLSGCSSSSDSSGSGQTNPGNPVIPDIDNSPEWGLDVGDTPDWGLADPEFGLPVPSIPDIDNTPDW
GLDTGNTPDRLPPVWGGPEMPPIDNGPEASYTISGSTITDTNGNIFVIKNVDWHGQSMIVQDQDGNDHYVSIIRQGDYEG
DFGIVIDGESIIIGGDTVQGGLRPFMENSSPEIDRNTIRDSIRARLN
>Mature_207_residues
MNKSLLAVVVSGALLLSGCSSSSDSSGSGQTNPGNPVIPDIDNSPEWGLDVGDTPDWGLADPEFGLPVPSIPDIDNTPDW
GLDTGNTPDRLPPVWGGPEMPPIDNGPEASYTISGSTITDTNGNIFVIKNVDWHGQSMIVQDQDGNDHYVSIIRQGDYEG
DFGIVIDGESIIIGGDTVQGGLRPFMENSSPEIDRNTIRDSIRARLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21975; Mature: 21975

Theoretical pI: Translated: 3.69; Mature: 3.69

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKSLLAVVVSGALLLSGCSSSSDSSGSGQTNPGNPVIPDIDNSPEWGLDVGDTPDWGLA
CCCCEEEHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DPEFGLPVPSIPDIDNTPDWGLDTGNTPDRLPPVWGGPEMPPIDNGPEASYTISGSTITD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEE
TNGNIFVIKNVDWHGQSMIVQDQDGNDHYVSIIRQGDYEGDFGIVIDGESIIIGGDTVQG
CCCCEEEEECCCCCCCEEEEEECCCCCEEEEEEECCCCCCCEEEEECCCEEEEECCCCCC
GLRPFMENSSPEIDRNTIRDSIRARLN
CCHHHHCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MNKSLLAVVVSGALLLSGCSSSSDSSGSGQTNPGNPVIPDIDNSPEWGLDVGDTPDWGLA
CCCCEEEHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DPEFGLPVPSIPDIDNTPDWGLDTGNTPDRLPPVWGGPEMPPIDNGPEASYTISGSTITD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEE
TNGNIFVIKNVDWHGQSMIVQDQDGNDHYVSIIRQGDYEGDFGIVIDGESIIIGGDTVQG
CCCCEEEEECCCCCCCEEEEEECCCCCEEEEEEECCCCCCCEEEEECCCEEEEECCCCCC
GLRPFMENSSPEIDRNTIRDSIRARLN
CCHHHHCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA