Click here to switch to the map view.

The map label for this gene is 59711476

Identifier: 59711476

GI number: 59711476

Start: 954580

End: 954873

Strand: Reverse

Name: 59711476

Synonym: VF_0869

Alternate gene names: NA

Gene position: 954873-954580 (Counterclockwise)

Preceding gene: 59711477

Following gene: 59711474

Centisome position: 32.95

GC content: 38.78

Gene sequence:

>294_bases
ATGAGGAAAAATTTAAAATATACGCGGAGATATCCCTTGAATATATCAAAACAAGAACAACGAGTGCTTCACACACTTGC
AATGGGTGGAGAAATCCGCCGTTACCTAAATGAAGATGGAAAGTTAACAGAGATAACTTGCTTTACTCGAGAAGGTTATG
GTCTATCTAACTGTACTATGGACACGTTTAAAAAGCTGAAGAATAAAAAGCTTATCAGCTCTAAAGGTGGACGACCGTAT
CGTATTACTCCTCTTGGAGCGACGTCTGCACAAGCACAAATGAATCAACGTTAA

Upstream 100 bases:

>100_bases
CAAATTTAAAACAAGGTACTTTTTGATTAAAACACTAGTTAGCATTGTATAAAAACCGTGTTTGGCTCCAAGTGGAACAA
ACACAATTTCAAAATCAACA

Downstream 100 bases:

>100_bases
CGGTTTAATAAAGATAAACAGTCTTTAAAAAGCGACCAATGAGAATCATTTATCACTAAATAGAGTGAATGAAAGACTAC
AAATTCAAATGGTGCGACAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MRKNLKYTRRYPLNISKQEQRVLHTLAMGGEIRRYLNEDGKLTEITCFTREGYGLSNCTMDTFKKLKNKKLISSKGGRPY
RITPLGATSAQAQMNQR

Sequences:

>Translated_97_residues
MRKNLKYTRRYPLNISKQEQRVLHTLAMGGEIRRYLNEDGKLTEITCFTREGYGLSNCTMDTFKKLKNKKLISSKGGRPY
RITPLGATSAQAQMNQR
>Mature_97_residues
MRKNLKYTRRYPLNISKQEQRVLHTLAMGGEIRRYLNEDGKLTEITCFTREGYGLSNCTMDTFKKLKNKKLISSKGGRPY
RITPLGATSAQAQMNQR

Specific function: Unknown

COG id: COG3811

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0386 family [H]

Homologues:

Organism=Escherichia coli, GI87082418, Length=85, Percent_Identity=44.7058823529412, Blast_Score=66, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018654 [H]

Pfam domain/function: PF09857 DUF2084 [H]

EC number: NA

Molecular weight: Translated: 11215; Mature: 11215

Theoretical pI: Translated: 10.88; Mature: 10.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKNLKYTRRYPLNISKQEQRVLHTLAMGGEIRRYLNEDGKLTEITCFTREGYGLSNCTM
CCCCCCCCEECCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEEEECCCCCCCCCCH
DTFKKLKNKKLISSKGGRPYRITPLGATSAQAQMNQR
HHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHCCCC
>Mature Secondary Structure
MRKNLKYTRRYPLNISKQEQRVLHTLAMGGEIRRYLNEDGKLTEITCFTREGYGLSNCTM
CCCCCCCCEECCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEEEECCCCCCCCCCH
DTFKKLKNKKLISSKGGRPYRITPLGATSAQAQMNQR
HHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA