| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is ackA
Identifier: 59711444
GI number: 59711444
Start: 923664
End: 924860
Strand: Reverse
Name: ackA
Synonym: VF_0837
Alternate gene names: 59711444
Gene position: 924860-923664 (Counterclockwise)
Preceding gene: 59711446
Following gene: 59711443
Centisome position: 31.92
GC content: 44.78
Gene sequence:
>1197_bases ATGTCTAAGCTGGTTTTAGTTTTAAACTGCGGTAGTTCTTCTCTTAAATTTGCGGTTGTTGACGCAGAATCTGGTGCAGA GCACTTAACTGGTCTTGCTGAGTGTCTTGGTCTTCCTGAAGCTCGTATGAAGTGGAAACTTGATGGCAAGCACGAAGCTC AACTAGGTGCAGGCGCTGCACACGTAGAAGCTCTATCATTTATGGTAGAAACTATCCTTGCATCTAAGCCAGAGCTTAAA GCTAACCTTGGCGCTATCGGTCACCGTATCGTACACGGTGGTGAGCAATTCACTAAGTCAGCTCTTATCACTGACGAAGT ACTTAAAGGTATTCAAGACGCTGCAACTTTTGCACCTCTTCATAACCCAGCTCACATCATCGGTATCGAAGCAGCTAAAG CTAACTTCCCAGGCCTTAAAAACGTTGCTGTATTTGACACTGCGTTCCACCAAACTATGCCTGAAGAATCTTACCTATAC GCTCTTCCATACAACCTATACAAAGAGCACGGCATCCGTCGTTACGGCATGCACGGTACTTCTCACCTGTTCATCACTCG TGAAGTTGCTGGCCTACTAAACAAACCTGTTGAAGAAGTTAACATCATTAACTGTCACCTAGGTAACGGCGCATCTGTAT GTGCAATTAAAAACGGTGAATCTGTAGATACTTCTATGGGTCTTACTCCTCTTGAAGGTCTAGTAATGGGTACTCGTTGT GGTGACATCGATCCTGCTATCGTTTTCCACCTACATGACGCTCTAGGTTACTCTGTTGAACAAATCAACAACATGCTAAC TAAAGAGTCTGGCCTACAAGGTCTAACTCAAGTAACTTCTGACTGTCGTTTCGTTGAAGACAACTACGGTGAGAAAGAAG AAGCAACACGTGCGATGGACGTATTCTGTCACCGTCTAGCTAAATACGTTGCAGGTTACACAGCAACTCTAGAAGGTCGT CTAGACGCAATCACTTTCACAGGCGGCATCGGTGAAAACTCTGCTCCAATCCGTGAAATGGTTCTTAACCGTCTAGGTAT CTTCGGTATCGAAGTTGATGGCGAAGCAAACCTTAAAGCACGTTTCGGTGGTGAAGGTACTATCACTACTGCTAACAGCC GTATTCCTGCAATGGTTATCTCTACTAACGAAGAGCTAGTTATCGCAGAAGACACAGCTAAACTAGCTGGTCTGTAA
Upstream 100 bases:
>100_bases TTTGGATAAATGTGGTTGTTTTCAATTAATCGACTACATTTGTCGTGATATGTCATTACGACATAACTTTAATTACTGAT GAATAAATAGGTATTTATAC
Downstream 100 bases:
>100_bases TATCTCCTAAAAGGCTAGCCATTAGGTTAGCCTTTTTTCTTTCTATGGCTTTATTTTTTCAATAAGGTCTCTTGCCCCAA TAGTGTAGAGGAATTTTCCA
Product: acetate kinase
Products: NA
Alternate protein names: Acetokinase 1
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MSKLVLVLNCGSSSLKFAVVDAESGAEHLTGLAECLGLPEARMKWKLDGKHEAQLGAGAAHVEALSFMVETILASKPELK ANLGAIGHRIVHGGEQFTKSALITDEVLKGIQDAATFAPLHNPAHIIGIEAAKANFPGLKNVAVFDTAFHQTMPEESYLY ALPYNLYKEHGIRRYGMHGTSHLFITREVAGLLNKPVEEVNIINCHLGNGASVCAIKNGESVDTSMGLTPLEGLVMGTRC GDIDPAIVFHLHDALGYSVEQINNMLTKESGLQGLTQVTSDCRFVEDNYGEKEEATRAMDVFCHRLAKYVAGYTATLEGR LDAITFTGGIGENSAPIREMVLNRLGIFGIEVDGEANLKARFGGEGTITTANSRIPAMVISTNEELVIAEDTAKLAGL
Sequences:
>Translated_398_residues MSKLVLVLNCGSSSLKFAVVDAESGAEHLTGLAECLGLPEARMKWKLDGKHEAQLGAGAAHVEALSFMVETILASKPELK ANLGAIGHRIVHGGEQFTKSALITDEVLKGIQDAATFAPLHNPAHIIGIEAAKANFPGLKNVAVFDTAFHQTMPEESYLY ALPYNLYKEHGIRRYGMHGTSHLFITREVAGLLNKPVEEVNIINCHLGNGASVCAIKNGESVDTSMGLTPLEGLVMGTRC GDIDPAIVFHLHDALGYSVEQINNMLTKESGLQGLTQVTSDCRFVEDNYGEKEEATRAMDVFCHRLAKYVAGYTATLEGR LDAITFTGGIGENSAPIREMVLNRLGIFGIEVDGEANLKARFGGEGTITTANSRIPAMVISTNEELVIAEDTAKLAGL >Mature_397_residues SKLVLVLNCGSSSLKFAVVDAESGAEHLTGLAECLGLPEARMKWKLDGKHEAQLGAGAAHVEALSFMVETILASKPELKA NLGAIGHRIVHGGEQFTKSALITDEVLKGIQDAATFAPLHNPAHIIGIEAAKANFPGLKNVAVFDTAFHQTMPEESYLYA LPYNLYKEHGIRRYGMHGTSHLFITREVAGLLNKPVEEVNIINCHLGNGASVCAIKNGESVDTSMGLTPLEGLVMGTRCG DIDPAIVFHLHDALGYSVEQINNMLTKESGLQGLTQVTSDCRFVEDNYGEKEEATRAMDVFCHRLAKYVAGYTATLEGRL DAITFTGGIGENSAPIREMVLNRLGIFGIEVDGEANLKARFGGEGTITTANSRIPAMVISTNEELVIAEDTAKLAGL
Specific function: Involved In The Activation Of Acetate To Acetyl CoA And The Secretion Of Acetate. During Anaerobic Growth Of The Organism, This Enzyme Is Also Involved In The Synthesis Of Most Of The ATP Formed Catabolically. [C]
COG id: COG0282
COG function: function code C; Acetate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetokinase family
Homologues:
Organism=Escherichia coli, GI1788633, Length=397, Percent_Identity=72.544080604534, Blast_Score=602, Evalue=1e-173, Organism=Escherichia coli, GI145693184, Length=395, Percent_Identity=45.0632911392405, Blast_Score=341, Evalue=4e-95,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): ACKA1_VIBF1 (Q5E6L4)
Other databases:
- EMBL: CP000020 - RefSeq: YP_204220.1 - ProteinModelPortal: Q5E6L4 - SMR: Q5E6L4 - STRING: Q5E6L4 - GeneID: 3278383 - GenomeReviews: CP000020_GR - KEGG: vfi:VF_0837 - NMPDR: fig|312309.3.peg.649 - eggNOG: COG0282 - HOGENOM: HBG285863 - OMA: PHLKDKN - PhylomeDB: Q5E6L4 - ProtClustDB: PRK00180 - BioCyc: VFIS312309:VF0837-MONOMER - GO: GO:0005737 - HAMAP: MF_00020 - InterPro: IPR000890 - InterPro: IPR004372 - PANTHER: PTHR21060 - PANTHER: PTHR21060:SF11 - PIRSF: PIRSF000722 - PRINTS: PR00471 - TIGRFAMs: TIGR00016
Pfam domain/function: PF00871 Acetate_kinase
EC number: =2.7.2.1
Molecular weight: Translated: 42661; Mature: 42530
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: PS01075 ACETATE_KINASE_1; PS01076 ACETATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLVLVLNCGSSSLKFAVVDAESGAEHLTGLAECLGLPEARMKWKLDGKHEAQLGAGAA CCCEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHCCCCHHEEEEECCCCCHHHCCCHH HVEALSFMVETILASKPELKANLGAIGHRIVHGGEQFTKSALITDEVLKGIQDAATFAPL HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC HNPAHIIGIEAAKANFPGLKNVAVFDTAFHQTMPEESYLYALPYNLYKEHGIRRYGMHGT CCCCEEEEEEECCCCCCCCCCEEEEEHHHHHCCCCCCEEEEECHHHHHHCCCEEECCCCC SHLFITREVAGLLNKPVEEVNIINCHLGNGASVCAIKNGESVDTSMGLTPLEGLVMGTRC CEEEEHHHHHHHHHCCHHHEEEEEEEECCCCEEEEECCCCCCCCCCCCCCHHHEEEECCC GDIDPAIVFHLHDALGYSVEQINNMLTKESGLQGLTQVTSDCRFVEDNYGEKEEATRAMD CCCCCEEEEEEHHHHCCCHHHHHHHHHHHHCHHHHHHHHHCCEEECCCCCCHHHHHHHHH VFCHRLAKYVAGYTATLEGRLDAITFTGGIGENSAPIREMVLNRLGIFGIEVDGEANLKA HHHHHHHHHHCCCEEEECCCEEEEEEECCCCCCCCHHHHHHHHHCCEEEEEECCCCCEEE RFGGEGTITTANSRIPAMVISTNEELVIAEDTAKLAGL EECCCEEEEECCCCCCEEEEECCCCEEEEECCHHHCCC >Mature Secondary Structure SKLVLVLNCGSSSLKFAVVDAESGAEHLTGLAECLGLPEARMKWKLDGKHEAQLGAGAA CCEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHCCCCHHEEEEECCCCCHHHCCCHH HVEALSFMVETILASKPELKANLGAIGHRIVHGGEQFTKSALITDEVLKGIQDAATFAPL HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC HNPAHIIGIEAAKANFPGLKNVAVFDTAFHQTMPEESYLYALPYNLYKEHGIRRYGMHGT CCCCEEEEEEECCCCCCCCCCEEEEEHHHHHCCCCCCEEEEECHHHHHHCCCEEECCCCC SHLFITREVAGLLNKPVEEVNIINCHLGNGASVCAIKNGESVDTSMGLTPLEGLVMGTRC CEEEEHHHHHHHHHCCHHHEEEEEEEECCCCEEEEECCCCCCCCCCCCCCHHHEEEECCC GDIDPAIVFHLHDALGYSVEQINNMLTKESGLQGLTQVTSDCRFVEDNYGEKEEATRAMD CCCCCEEEEEEHHHHCCCHHHHHHHHHHHHCHHHHHHHHHCCEEECCCCCCHHHHHHHHH VFCHRLAKYVAGYTATLEGRLDAITFTGGIGENSAPIREMVLNRLGIFGIEVDGEANLKA HHHHHHHHHHCCCEEEECCCEEEEEEECCCCCCCCHHHHHHHHHCCEEEEEECCCCCEEE RFGGEGTITTANSRIPAMVISTNEELVIAEDTAKLAGL EECCCEEEEECCCCCCEEEEECCCCEEEEECCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA