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The map label for this gene is ybeD [C]

Identifier: 59711351

GI number: 59711351

Start: 811640

End: 811909

Strand: Reverse

Name: ybeD [C]

Synonym: VF_0744

Alternate gene names: 59711351

Gene position: 811909-811640 (Counterclockwise)

Preceding gene: 59711352

Following gene: 59711350

Centisome position: 28.02

GC content: 41.85

Gene sequence:

>270_bases
ATGCAAGAGCAACCAAAGCTAAAAGATCTTCTAGAATTCCCATGTAAATTTACTTACAAAGCCGTTGGCCTTGCTCATGA
AGAGCTACCTGAGCTTGTTCTTGAAGTAATCCAACGTCATGCTCCTGGCGATTACACACCAGCAGTAAAGCCAAGTGGCA
AAGGTAACTACCACTCAGTATCTGTAAGCATTACAGCGACCTCTATTGAGCAAGTAGAAACGCTTTATAAAGAACTAGCG
GAAATCGAAATCGTTCGTATGGTTCTGTAA

Upstream 100 bases:

>100_bases
TCGGTTGCCTTTTTTAATTTACTGGATTAACACTTGTTATCTGACCTAGGTCACAGTAATATTCTCAACATATATTATCC
ACTCTCGATTGGAGACGGTT

Downstream 100 bases:

>100_bases
TAAAATGATAGGCAATATTAGTTGATAATATTGCCTACCTTTTTGATCTTTTGATATACCCCTACATTTCTTATCTATTC
CTTCCCTTCTATCCTTGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MQEQPKLKDLLEFPCKFTYKAVGLAHEELPELVLEVIQRHAPGDYTPAVKPSGKGNYHSVSVSITATSIEQVETLYKELA
EIEIVRMVL

Sequences:

>Translated_89_residues
MQEQPKLKDLLEFPCKFTYKAVGLAHEELPELVLEVIQRHAPGDYTPAVKPSGKGNYHSVSVSITATSIEQVETLYKELA
EIEIVRMVL
>Mature_89_residues
MQEQPKLKDLLEFPCKFTYKAVGLAHEELPELVLEVIQRHAPGDYTPAVKPSGKGNYHSVSVSITATSIEQVETLYKELA
EIEIVRMVL

Specific function: Unknown

COG id: COG2921

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0250 family [H]

Homologues:

Organism=Escherichia coli, GI1786850, Length=84, Percent_Identity=71.4285714285714, Blast_Score=125, Evalue=7e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007454 [H]

Pfam domain/function: PF04359 DUF493 [H]

EC number: NA

Molecular weight: Translated: 9997; Mature: 9997

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEQPKLKDLLEFPCKFTYKAVGLAHEELPELVLEVIQRHAPGDYTPAVKPSGKGNYHSV
CCCCCHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
SVSITATSIEQVETLYKELAEIEIVRMVL
EEEEEHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQEQPKLKDLLEFPCKFTYKAVGLAHEELPELVLEVIQRHAPGDYTPAVKPSGKGNYHSV
CCCCCHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
SVSITATSIEQVETLYKELAEIEIVRMVL
EEEEEHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA