| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
Click here to switch to the map view.
The map label for this gene is ureA
Identifier: 59711282
GI number: 59711282
Start: 737848
End: 738150
Strand: Reverse
Name: ureA
Synonym: VF_0675
Alternate gene names: 59711282
Gene position: 738150-737848 (Counterclockwise)
Preceding gene: 59711283
Following gene: 59711281
Centisome position: 25.48
GC content: 42.57
Gene sequence:
>303_bases ATGGAATTAACACCAAGAGAAAAAGACAAACTGCTGCTTGCCTCTGCTGGCATGATAGCTGAAAGACGTAAAGCCCGTGG ATTAAAACTGAATTATCCAGAAGCCGTGGCTTTAATCTGTTTTGAAATAATGGAAGGTGCTCGTGATGGTCGTACAGTGG CTGATCTAATGAACTACGGTCGTACCATTTTAACCGCTGATGATGTAATGGAAGGCGTCCCTGAGATGATTCCAGATGTT CAGGTTGAATGTACTTTCCCTGACGGCACCAAACTTGTTTCAATTCATGAGCCAATTGTTTAA
Upstream 100 bases:
>100_bases GCGTGCTTTAGCACTTTATGGCAACACACTCGTCAGCATTGGTTAGGCAAATTACCCGAAGTCCCACGAATCTGGGCTAC ATAATTAAGTTGGAATAGCT
Downstream 100 bases:
>100_bases GGAGCAAATCATGATCCCTGGAGAATTAAGAGTGAATGATGACCTTGGTCAAATCGAATTGAACGTAGGTCGAACAACAC AAACACTTTCTGTCGCTAAT
Product: urease subunit gamma
Products: NA
Alternate protein names: Urea amidohydrolase subunit gamma
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MELTPREKDKLLLASAGMIAERRKARGLKLNYPEAVALICFEIMEGARDGRTVADLMNYGRTILTADDVMEGVPEMIPDV QVECTFPDGTKLVSIHEPIV
Sequences:
>Translated_100_residues MELTPREKDKLLLASAGMIAERRKARGLKLNYPEAVALICFEIMEGARDGRTVADLMNYGRTILTADDVMEGVPEMIPDV QVECTFPDGTKLVSIHEPIV >Mature_100_residues MELTPREKDKLLLASAGMIAERRKARGLKLNYPEAVALICFEIMEGARDGRTVADLMNYGRTILTADDVMEGVPEMIPDV QVECTFPDGTKLVSIHEPIV
Specific function: Unknown
COG id: COG0831
COG function: function code E; Urea amidohydrolase (urease) gamma subunit
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the urease gamma subunit family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): URE3_VIBF1 (Q5E726)
Other databases:
- EMBL: CP000020 - RefSeq: YP_204058.1 - ProteinModelPortal: Q5E726 - SMR: Q5E726 - STRING: Q5E726 - GeneID: 3277829 - GenomeReviews: CP000020_GR - KEGG: vfi:VF_0675 - NMPDR: fig|312309.3.peg.1174 - eggNOG: COG0831 - HOGENOM: HBG286300 - OMA: YPEAVAY - ProtClustDB: PRK13241 - BioCyc: VFIS312309:VF0675-MONOMER - GO: GO:0005737 - HAMAP: MF_00739 - InterPro: IPR002026 - InterPro: IPR012010 - Gene3D: G3DSA:3.30.280.10 - PIRSF: PIRSF001223 - ProDom: PD002319 - TIGRFAMs: TIGR00193
Pfam domain/function: PF00547 Urease_gamma; SSF54111 Urease_gamma_reg
EC number: =3.5.1.5
Molecular weight: Translated: 11076; Mature: 11076
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELTPREKDKLLLASAGMIAERRKARGLKLNYPEAVALICFEIMEGARDGRTVADLMNYG CCCCCCCCCCEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCC RTILTADDVMEGVPEMIPDVQVECTFPDGTKLVSIHEPIV CEEEEHHHHHHHHHHHCCCCEEEEECCCCCEEEECCCCCC >Mature Secondary Structure MELTPREKDKLLLASAGMIAERRKARGLKLNYPEAVALICFEIMEGARDGRTVADLMNYG CCCCCCCCCCEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCC RTILTADDVMEGVPEMIPDVQVECTFPDGTKLVSIHEPIV CEEEEHHHHHHHHHHHCCCCEEEEECCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA