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The map label for this gene is 59711178

Identifier: 59711178

GI number: 59711178

Start: 625009

End: 625524

Strand: Reverse

Name: 59711178

Synonym: VF_0571

Alternate gene names: NA

Gene position: 625524-625009 (Counterclockwise)

Preceding gene: 59711180

Following gene: 59711177

Centisome position: 21.59

GC content: 34.5

Gene sequence:

>516_bases
ATGAATCGCGGGTTTACCTTACTAGAGCTTTTAATTACGGTTACCGTTTTAGCAATACTATTATCTGTTGCAGCTCCAAA
CTTCAATACCATAAATAACAGCGTAAAAATGGAACGTTTAGCAACCGAACTAAATGGTTTTTTAATTCAAGCGAAATCAG
AAGCCGTACTAAAAAATAAAGATTTATGGGTTCATATTTCATTTCCTAAAACAGAAGAAAATAAAGTGGGCTCATGGAGT
TTAGTACTAAGAGATTCATCGGCTCTTTCTGGAAATATGATTGCTTATTTAGATGGTAGTAACTTCAAAGGTATAACCTT
AAAACATACATATACATATCAAAAAACAAAATTTGAAGGAATACGAGGGCGACCAGCTCCAGGTTCGTTTACTTTCCACC
CAAATACCGACACTACAAAAACCTTAAAGGTTTTTCTATCTAACCCACCAGGCAGAATTAAAATTTGCTATGACAATACA
AGTGGAACTCTCTATGGCTATAACTCCTGTTCATAA

Upstream 100 bases:

>100_bases
CATTTATCCTCTACCTAGCATCTTTATATTCTTAATAGTTGATATAATTTACGCAAGCGTTATTGCTGCTCTATCAATAA
GTTACAAAGGAAATTGAGAG

Downstream 100 bases:

>100_bases
ATATAAACAGAAAGGCGCCTCTCTGATTGAGCTTCTTATTGCATCTTTTATAGGAATTATCGCTATCAGTCTTGTTGGTT
CTATTTTTATTAACGGTCAA

Product: type IV pilin, putative

Products: NA

Alternate protein names: Tfp Pilus Assembly Protein FimT; Type 4 Fimbrial Biogenesis Protein FimT

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MNRGFTLLELLITVTVLAILLSVAAPNFNTINNSVKMERLATELNGFLIQAKSEAVLKNKDLWVHISFPKTEENKVGSWS
LVLRDSSALSGNMIAYLDGSNFKGITLKHTYTYQKTKFEGIRGRPAPGSFTFHPNTDTTKTLKVFLSNPPGRIKICYDNT
SGTLYGYNSCS

Sequences:

>Translated_171_residues
MNRGFTLLELLITVTVLAILLSVAAPNFNTINNSVKMERLATELNGFLIQAKSEAVLKNKDLWVHISFPKTEENKVGSWS
LVLRDSSALSGNMIAYLDGSNFKGITLKHTYTYQKTKFEGIRGRPAPGSFTFHPNTDTTKTLKVFLSNPPGRIKICYDNT
SGTLYGYNSCS
>Mature_171_residues
MNRGFTLLELLITVTVLAILLSVAAPNFNTINNSVKMERLATELNGFLIQAKSEAVLKNKDLWVHISFPKTEENKVGSWS
LVLRDSSALSGNMIAYLDGSNFKGITLKHTYTYQKTKFEGIRGRPAPGSFTFHPNTDTTKTLKVFLSNPPGRIKICYDNT
SGTLYGYNSCS

Specific function: Unknown

COG id: COG4970

COG function: function code NU; Tfp pilus assembly protein FimT

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18958; Mature: 18958

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRGFTLLELLITVTVLAILLSVAAPNFNTINNSVKMERLATELNGFLIQAKSEAVLKNK
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCEEECC
DLWVHISFPKTEENKVGSWSLVLRDSSALSGNMIAYLDGSNFKGITLKHTYTYQKTKFEG
CEEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCEEEEEEEEECCEEECC
IRGRPAPGSFTFHPNTDTTKTLKVFLSNPPGRIKICYDNTSGTLYGYNSCS
CCCCCCCCCEEECCCCCCCEEEEEEECCCCCEEEEEEECCCCEEEECCCCC
>Mature Secondary Structure
MNRGFTLLELLITVTVLAILLSVAAPNFNTINNSVKMERLATELNGFLIQAKSEAVLKNK
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCEEECC
DLWVHISFPKTEENKVGSWSLVLRDSSALSGNMIAYLDGSNFKGITLKHTYTYQKTKFEG
CEEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCEEEEEEEEECCEEECC
IRGRPAPGSFTFHPNTDTTKTLKVFLSNPPGRIKICYDNTSGTLYGYNSCS
CCCCCCCCCEEECCCCCCCEEEEEEECCCCCEEEEEEECCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA