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The map label for this gene is srpC [H]

Identifier: 59711180

GI number: 59711180

Start: 626108

End: 627259

Strand: Reverse

Name: srpC [H]

Synonym: VF_0573

Alternate gene names: 59711180

Gene position: 627259-626108 (Counterclockwise)

Preceding gene: 59711182

Following gene: 59711178

Centisome position: 21.65

GC content: 39.5

Gene sequence:

>1152_bases
ATGTTTGAAATATTTAAACGATTTTTTTTGTTAGGCTGGGTAAGTTTTGGTGGGCCAGCTGCCCACATTGGTTACTTTAG
AAATGAATTTGTTCAAAAACGTGGATGGATTAGTGAAGAAGAATACGCTCAATTAATCGCATTAAGCCAATTTTTACCAG
GACCAGGCTCAAGCCAAGTAGGTTTTGCATTAGGTTACCACCGCAAAGGCCTTCTGGGGGCTTTATTAGCTTCAATTAGC
TTTACATTACCGTCTATTCTTATCATGGTATTACTTGCGAATATCAGTCACTCATTTTTTGGTAATGACGTTTTTGAAGG
TGTTATTCACGGCTTAAAATTACTCGCTGTCGTCGTCGTTGCTGATGCGATTATGGGGATGTATAAAAGTTTCTGTAAAG
ATAAGCTCACCGTCTTCCTTTGTATAATGACAGCAACGTTGTTACTGATTTTACCGTCTATCACAACTCAATTGCTCGCA
TTATTTATTGCGGCACTGATTGGACGCTTTTACCTAAAATCAGATGATAAAGAGCAAATTGAACAAGACTCAAAAGGCAT
CAATTGGCTTCCTTTAATTATCTTTGCTTTATGCTTTTTTGTATTACCTACAGTTGTAAGTTACTCACCACTACTGGGTT
TATTTTCAGACTTTTTCCAAGCTGGTAGTTTGGTGTTTGGTGGCGGTCACGTTGTCCTACCATTACTACAAAATATTGTT
GGCGACCAAGTTAGCACGGATAGCTTCTTAACTGGCTACGCAGCTGCACAGGCTGTTCCTGGTCCAATGTTTACCTTTGC
TACTTTCTTAGGCTACGAACTATGGAGTGAGCAACCAGTACTTGGCGCTATCATTGCCACTGTTGCTATTTTCTTACCGG
GTTTCTTATTGGTTCTTGGTGTATTTAATCACTGGCAAGTACTTGCTAAAAAGCCAGCACTTTCAGGAGCGATTATTGGT
ATTAATGCAGCGGTTGTGGGATTACTAATTTCTGCGTTGTATGATCCAGTATTCACAAGCGCTGTTAATTCTGGCTTAGA
TATGGCGCTAGTACTTATCGGCTTTGCACTATTAAAAGTGGCTAAACTTCCAATAGTTGGATTAGTTAGCTTCTTTATTA
TTGCAGGTGGTGTGTTAGCTTTTGTTGCGTGA

Upstream 100 bases:

>100_bases
CAATACAATCGATTTGAATAATTTTATAGTAACTCGTAATCTTGAACTCATCAAAATTGAATATCCAAAATTGGATCACA
CATCAAAAGCTGAGTAGATT

Downstream 100 bases:

>100_bases
TTGATGAATACAAAGGTGGGTACGATTACTATAAATGCTCACCTTTATTTACCAACACTCACTAGGGCTCGCTACATTAA
ACTGATTTAGCGTAATCTCA

Product: chromate transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MFEIFKRFFLLGWVSFGGPAAHIGYFRNEFVQKRGWISEEEYAQLIALSQFLPGPGSSQVGFALGYHRKGLLGALLASIS
FTLPSILIMVLLANISHSFFGNDVFEGVIHGLKLLAVVVVADAIMGMYKSFCKDKLTVFLCIMTATLLLILPSITTQLLA
LFIAALIGRFYLKSDDKEQIEQDSKGINWLPLIIFALCFFVLPTVVSYSPLLGLFSDFFQAGSLVFGGGHVVLPLLQNIV
GDQVSTDSFLTGYAAAQAVPGPMFTFATFLGYELWSEQPVLGAIIATVAIFLPGFLLVLGVFNHWQVLAKKPALSGAIIG
INAAVVGLLISALYDPVFTSAVNSGLDMALVLIGFALLKVAKLPIVGLVSFFIIAGGVLAFVA

Sequences:

>Translated_383_residues
MFEIFKRFFLLGWVSFGGPAAHIGYFRNEFVQKRGWISEEEYAQLIALSQFLPGPGSSQVGFALGYHRKGLLGALLASIS
FTLPSILIMVLLANISHSFFGNDVFEGVIHGLKLLAVVVVADAIMGMYKSFCKDKLTVFLCIMTATLLLILPSITTQLLA
LFIAALIGRFYLKSDDKEQIEQDSKGINWLPLIIFALCFFVLPTVVSYSPLLGLFSDFFQAGSLVFGGGHVVLPLLQNIV
GDQVSTDSFLTGYAAAQAVPGPMFTFATFLGYELWSEQPVLGAIIATVAIFLPGFLLVLGVFNHWQVLAKKPALSGAIIG
INAAVVGLLISALYDPVFTSAVNSGLDMALVLIGFALLKVAKLPIVGLVSFFIIAGGVLAFVA
>Mature_383_residues
MFEIFKRFFLLGWVSFGGPAAHIGYFRNEFVQKRGWISEEEYAQLIALSQFLPGPGSSQVGFALGYHRKGLLGALLASIS
FTLPSILIMVLLANISHSFFGNDVFEGVIHGLKLLAVVVVADAIMGMYKSFCKDKLTVFLCIMTATLLLILPSITTQLLA
LFIAALIGRFYLKSDDKEQIEQDSKGINWLPLIIFALCFFVLPTVVSYSPLLGLFSDFFQAGSLVFGGGHVVLPLLQNIV
GDQVSTDSFLTGYAAAQAVPGPMFTFATFLGYELWSEQPVLGAIIATVAIFLPGFLLVLGVFNHWQVLAKKPALSGAIIG
INAAVVGLLISALYDPVFTSAVNSGLDMALVLIGFALLKVAKLPIVGLVSFFIIAGGVLAFVA

Specific function: May function in the active transport of chromate into the cell under sulfur-deficient conditions [H]

COG id: COG2059

COG function: function code P; Chromate transport protein ChrA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003370
- InterPro:   IPR014047 [H]

Pfam domain/function: PF02417 Chromate_transp [H]

EC number: NA

Molecular weight: Translated: 41190; Mature: 41190

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEIFKRFFLLGWVSFGGPAAHIGYFRNEFVQKRGWISEEEYAQLIALSQFLPGPGSSQV
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCC
GFALGYHRKGLLGALLASISFTLPSILIMVLLANISHSFFGNDVFEGVIHGLKLLAVVVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
ADAIMGMYKSFCKDKLTVFLCIMTATLLLILPSITTQLLALFIAALIGRFYLKSDDKEQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
EQDSKGINWLPLIIFALCFFVLPTVVSYSPLLGLFSDFFQAGSLVFGGGHVVLPLLQNIV
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHH
GDQVSTDSFLTGYAAAQAVPGPMFTFATFLGYELWSEQPVLGAIIATVAIFLPGFLLVLG
CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
VFNHWQVLAKKPALSGAIIGINAAVVGLLISALYDPVFTSAVNSGLDMALVLIGFALLKV
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
AKLPIVGLVSFFIIAGGVLAFVA
HHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFEIFKRFFLLGWVSFGGPAAHIGYFRNEFVQKRGWISEEEYAQLIALSQFLPGPGSSQV
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCC
GFALGYHRKGLLGALLASISFTLPSILIMVLLANISHSFFGNDVFEGVIHGLKLLAVVVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
ADAIMGMYKSFCKDKLTVFLCIMTATLLLILPSITTQLLALFIAALIGRFYLKSDDKEQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
EQDSKGINWLPLIIFALCFFVLPTVVSYSPLLGLFSDFFQAGSLVFGGGHVVLPLLQNIV
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHH
GDQVSTDSFLTGYAAAQAVPGPMFTFATFLGYELWSEQPVLGAIIATVAIFLPGFLLVLG
CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
VFNHWQVLAKKPALSGAIIGINAAVVGLLISALYDPVFTSAVNSGLDMALVLIGFALLKV
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
AKLPIVGLVSFFIIAGGVLAFVA
HHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7536734 [H]