Definition | Thermus thermophilus HB8 chromosome, complete genome. |
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Accession | NC_006461 |
Length | 1,849,742 |
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The map label for this gene is 55980902
Identifier: 55980902
GI number: 55980902
Start: 882626
End: 882856
Strand: Reverse
Name: 55980902
Synonym: TTHA0933
Alternate gene names: NA
Gene position: 882856-882626 (Counterclockwise)
Preceding gene: 55980903
Following gene: 55980901
Centisome position: 47.73
GC content: 66.67
Gene sequence:
>231_bases ATGAAAGGGATGCGCTACACCGTCGTCTTACGCCCCGACCCGGAGACCCCAGGGGTGTGGCTTGCTGAGGTGCCCGCCCT GCCCTGGTGCGCCACCTTCGGCCACTCCCCGGAAGAGGCCCTGGAAAACGCCAAGGACGCCTTGGAAGCCGCCTTAGAGG CCTTGGAAGCCTTGGGGGAGGCCCCGCCTCCCGATGTGACCGTGGCCCAGATTTCCCTGGATGCCGCCTAA
Upstream 100 bases:
>100_bases TACTGGCCTCCCTCCAACTTTGAGGCGGCCTTCCTCTCCGTGGCCCACAGGGAGGAGGACGTGGAAAAGACCCTCGAGGC CCTGAGGAAGGCCTTGTAGA
Downstream 100 bases:
>100_bases GACCTCCGAGGTGGCCCGGAAGCTTGAGCGGCTAGGTTTCAAGCCGCTCCCCCGTCGGGGCAAAGGGGGACACCGGGTCT ACGTGCACCCGGACGGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 76; Mature: 76
Protein sequence:
>76_residues MKGMRYTVVLRPDPETPGVWLAEVPALPWCATFGHSPEEALENAKDALEAALEALEALGEAPPPDVTVAQISLDAA
Sequences:
>Translated_76_residues MKGMRYTVVLRPDPETPGVWLAEVPALPWCATFGHSPEEALENAKDALEAALEALEALGEAPPPDVTVAQISLDAA >Mature_76_residues MKGMRYTVVLRPDPETPGVWLAEVPALPWCATFGHSPEEALENAKDALEAALEALEALGEAPPPDVTVAQISLDAA
Specific function: Unknown
COG id: COG1598
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8039; Mature: 8039
Theoretical pI: Translated: 3.88; Mature: 3.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGMRYTVVLRPDPETPGVWLAEVPALPWCATFGHSPEEALENAKDALEAALEALEALGE CCCCEEEEEECCCCCCCCEEEECCCCCCEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC APPPDVTVAQISLDAA CCCCCCEEEEEEECCC >Mature Secondary Structure MKGMRYTVVLRPDPETPGVWLAEVPALPWCATFGHSPEEALENAKDALEAALEALEALGE CCCCEEEEEECCCCCCCCEEEECCCCCCEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC APPPDVTVAQISLDAA CCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA