Definition | Thermus thermophilus HB8 chromosome, complete genome. |
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Accession | NC_006461 |
Length | 1,849,742 |
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The map label for this gene is 55980901
Identifier: 55980901
GI number: 55980901
Start: 882424
End: 882636
Strand: Reverse
Name: 55980901
Synonym: TTHA0932
Alternate gene names: NA
Gene position: 882636-882424 (Counterclockwise)
Preceding gene: 55980902
Following gene: 55980900
Centisome position: 47.72
GC content: 63.38
Gene sequence:
>213_bases ATGCCGCCTAAGACCTCCGAGGTGGCCCGGAAGCTTGAGCGGCTAGGTTTCAAGCCGCTCCCCCGTCGGGGCAAAGGGGG ACACCGGGTCTACGTGCACCCGGACGGCCGAAAGGTGGTGCTGCCCCTGCACTCCGGCGAGATACCTTGGGGTCTTTTTA AGACCGTTCTGAAACAAGCGGGGATCACCGAAGAGGAGTTTCGCCGGGCGTGA
Upstream 100 bases:
>100_bases CTGGAAAACGCCAAGGACGCCTTGGAAGCCGCCTTAGAGGCCTTGGAAGCCTTGGGGGAGGCCCCGCCTCCCGATGTGAC CGTGGCCCAGATTTCCCTGG
Downstream 100 bases:
>100_bases ACCTTAAAGACCCCATCTGCGCCATCGCCACCCCCCCCGGGAAGGGGGCCATCGGGGTGGTGCGGCTTTCCGGCGAGGGC GCCCTGGAGATCGCCGCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 70; Mature: 69
Protein sequence:
>70_residues MPPKTSEVARKLERLGFKPLPRRGKGGHRVYVHPDGRKVVLPLHSGEIPWGLFKTVLKQAGITEEEFRRA
Sequences:
>Translated_70_residues MPPKTSEVARKLERLGFKPLPRRGKGGHRVYVHPDGRKVVLPLHSGEIPWGLFKTVLKQAGITEEEFRRA >Mature_69_residues PPKTSEVARKLERLGFKPLPRRGKGGHRVYVHPDGRKVVLPLHSGEIPWGLFKTVLKQAGITEEEFRRA
Specific function: Unknown
COG id: COG1724
COG function: function code N; Predicted periplasmic or secreted lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7956; Mature: 7825
Theoretical pI: Translated: 11.37; Mature: 11.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPKTSEVARKLERLGFKPLPRRGKGGHRVYVHPDGRKVVLPLHSGEIPWGLFKTVLKQA CCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCHHHHHHHHHHC GITEEEFRRA CCCHHHHHCC >Mature Secondary Structure PPKTSEVARKLERLGFKPLPRRGKGGHRVYVHPDGRKVVLPLHSGEIPWGLFKTVLKQA CCCHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCHHHHHHHHHHC GITEEEFRRA CCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA