Definition | Thermus thermophilus HB8 chromosome, complete genome. |
---|---|
Accession | NC_006461 |
Length | 1,849,742 |
Click here to switch to the map view.
The map label for this gene is 55980833
Identifier: 55980833
GI number: 55980833
Start: 824884
End: 825270
Strand: Reverse
Name: 55980833
Synonym: TTHA0864
Alternate gene names: NA
Gene position: 825270-824884 (Counterclockwise)
Preceding gene: 55980836
Following gene: 55980832
Centisome position: 44.62
GC content: 66.15
Gene sequence:
>387_bases ATGGGCATCTACGAGGCCATCCAGGCCACGATCAAGGAGGCGATGAAGGCCCGGGACGAAAGGACCCTGGCCTTCGCCCG GGTGGTCAAGGCGGAGCTGGACCGCAAGGGCGACGGGAAGCCCCTCCCCGACGAGGAGGCGGTGAAGGTGCTGAAAGCCC TCAAGGAGATCGCCCTGGAGCAGGGCAACGCCTTTGAAGCGGAGTTTCTGGACCGCTTCCTGCCCAAGGAGATGTCCGAG GAGGAGCTGGAGGCCTGGATCCGGGAGCACGTGGACCTCTCCCAGTTCAAAAACCCCCTCGCGGCCATCGGGGTGGTCAC CAAGGCCCTGGGGCCCAAGGCCCCGGGGGAGAAGGTGCGCAAGGTCATCGAGCGCCTCACGCGATGA
Upstream 100 bases:
>100_bases CTCCAAGGTGTTCCCGTACTTGCCTGCCGCCTTGCGCATCGGGGACCTCCGTAGGGGATTTTACCCTCTCCACGGCCGCC CCCGGGGTAAACTGGGTCCC
Downstream 100 bases:
>100_bases GCCCCTGGGAGCGCATCCTCCTAGAGGAGATCCTCTCCGAGCCCGTCCGCCTGGTGAAGGAACGGGTACGGACGCACACG GGCCGGGAGCTCACCTACGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MGIYEAIQATIKEAMKARDERTLAFARVVKAELDRKGDGKPLPDEEAVKVLKALKEIALEQGNAFEAEFLDRFLPKEMSE EELEAWIREHVDLSQFKNPLAAIGVVTKALGPKAPGEKVRKVIERLTR
Sequences:
>Translated_128_residues MGIYEAIQATIKEAMKARDERTLAFARVVKAELDRKGDGKPLPDEEAVKVLKALKEIALEQGNAFEAEFLDRFLPKEMSE EELEAWIREHVDLSQFKNPLAAIGVVTKALGPKAPGEKVRKVIERLTR >Mature_127_residues GIYEAIQATIKEAMKARDERTLAFARVVKAELDRKGDGKPLPDEEAVKVLKALKEIALEQGNAFEAEFLDRFLPKEMSEE ELEAWIREHVDLSQFKNPLAAIGVVTKALGPKAPGEKVRKVIERLTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14386; Mature: 14255
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIYEAIQATIKEAMKARDERTLAFARVVKAELDRKGDGKPLPDEEAVKVLKALKEIALE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH QGNAFEAEFLDRFLPKEMSEEELEAWIREHVDLSQFKNPLAAIGVVTKALGPKAPGEKVR CCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH KVIERLTR HHHHHHCC >Mature Secondary Structure GIYEAIQATIKEAMKARDERTLAFARVVKAELDRKGDGKPLPDEEAVKVLKALKEIALE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH QGNAFEAEFLDRFLPKEMSEEELEAWIREHVDLSQFKNPLAAIGVVTKALGPKAPGEKVR CCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH KVIERLTR HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA