| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
Click here to switch to the map view.
The map label for this gene is aroF [H]
Identifier: 55980769
GI number: 55980769
Start: 764983
End: 766017
Strand: Reverse
Name: aroF [H]
Synonym: TTHA0800
Alternate gene names: 55980769
Gene position: 766017-764983 (Counterclockwise)
Preceding gene: 55980770
Following gene: 55980768
Centisome position: 41.41
GC content: 69.76
Gene sequence:
>1035_bases ATGCTGATCGTGATGAAGCGGGGGTACACGGAGGAGGAGCTTCAGGAGGTCGTCCGGGAAATAGAGAAGGTGGGCTACCG GCCCCACGTCTCCCGGGGCGTGGAGACCACCCTGGTGGGGGCCATCGGCCGGGGGCCCACCCCCGAGCTCATGGAGCACT TCCGGGCCCTGCCGGGAGTGGCCGAGGTCATCCCCATCTCCAAGCCCTGGAAGCTCGCAAGCCTCGAGGTCCAGCCCTTC CCCACGGTCCTGGAGTTCCCCACGGGGAAGACGGGGGGCGGCCACGTGATGGTGGCGGCGGGGCCTTGCGGGGTGGAGTC CCGGGAGCAGACCCTGAGGGCCGCCCACTACGTGAAGGCCCACGGGGCCCACATGCTCCGGGGGGGCGCTTTCAAACCCC GCACGAGCCCCTACGCCTTCCAGGGCCTGGGCCTCGAGGGCCTGAAGATCCTCGCCGAGGCCAAGAGGGAGACGGGCCTC CCCATCGTCACCGAGGTCCTCTCCCCGGAGCAGGTGGAGCTCGTGGCCGAGTACGCCGACGTCCTCCAGATCGGGGCGCG GAACGCCCAGAACTTTCCCCTGCTCCAGGCGGTGGGGGAGGCGGGAAAGCCCGTCCTCCTCAAGCGGGGGATGAGCATGA CCCTGGAAGAGTTCCTCATGAGCGCGGAGTACATCCTCTCCCGGGGCAACATGCGGGTGATCCTCGTGGAGCGGGGCATC CGCACCTTTGAGAAGGCCACCCGCTTCACCCTAGACGTCGCCGCCGTGCCCGTCCTCAAGAGCTGGACCCACCTCCCCGT CTGGATAGACCCCTCCCACCCGGCGGGCAAGAGGGACTGGGTCATCCCCTTGGCCCTGGCGGGGCTCGCCGCGGGAGCGG ACGGCCTCATCGTGGAGACCCACCCCGAGCCGGAAAAGGCCCTCTCCGACGCCGCCCAGCAGCTCCACGAGCACGAGTTC GCCGAGCTCATGGACAAGGTGCGCCGCCTGGTGGCCGCCCTGGACAAGACCCTCGCCGCCCCCGTCCTGGGATGA
Upstream 100 bases:
>100_bases CTTTTATTACCCCGCCGGGGGCGCCCTGCGGTCCGCGTAGGCCATACCGCGAAAAGGGCGCCCCCTAAAGGGGGCGCCCA AGGTTTTTGGGAGGGAAGCC
Downstream 100 bases:
>100_bases AGCCCCTCTTCGGCAAAGTCGGGGTCTTCGGCGTGGGCCTTCTGGGCGGGAGCGTGGCCCTGGGGATTAAGGAGCGCTTC CTCGCCGAGGAGGTCCACGC
Product: 3-deoxy-7-phosphoheptulonate synthase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MLIVMKRGYTEEELQEVVREIEKVGYRPHVSRGVETTLVGAIGRGPTPELMEHFRALPGVAEVIPISKPWKLASLEVQPF PTVLEFPTGKTGGGHVMVAAGPCGVESREQTLRAAHYVKAHGAHMLRGGAFKPRTSPYAFQGLGLEGLKILAEAKRETGL PIVTEVLSPEQVELVAEYADVLQIGARNAQNFPLLQAVGEAGKPVLLKRGMSMTLEEFLMSAEYILSRGNMRVILVERGI RTFEKATRFTLDVAAVPVLKSWTHLPVWIDPSHPAGKRDWVIPLALAGLAAGADGLIVETHPEPEKALSDAAQQLHEHEF AELMDKVRRLVAALDKTLAAPVLG
Sequences:
>Translated_344_residues MLIVMKRGYTEEELQEVVREIEKVGYRPHVSRGVETTLVGAIGRGPTPELMEHFRALPGVAEVIPISKPWKLASLEVQPF PTVLEFPTGKTGGGHVMVAAGPCGVESREQTLRAAHYVKAHGAHMLRGGAFKPRTSPYAFQGLGLEGLKILAEAKRETGL PIVTEVLSPEQVELVAEYADVLQIGARNAQNFPLLQAVGEAGKPVLLKRGMSMTLEEFLMSAEYILSRGNMRVILVERGI RTFEKATRFTLDVAAVPVLKSWTHLPVWIDPSHPAGKRDWVIPLALAGLAAGADGLIVETHPEPEKALSDAAQQLHEHEF AELMDKVRRLVAALDKTLAAPVLG >Mature_344_residues MLIVMKRGYTEEELQEVVREIEKVGYRPHVSRGVETTLVGAIGRGPTPELMEHFRALPGVAEVIPISKPWKLASLEVQPF PTVLEFPTGKTGGGHVMVAAGPCGVESREQTLRAAHYVKAHGAHMLRGGAFKPRTSPYAFQGLGLEGLKILAEAKRETGL PIVTEVLSPEQVELVAEYADVLQIGARNAQNFPLLQAVGEAGKPVLLKRGMSMTLEEFLMSAEYILSRGNMRVILVERGI RTFEKATRFTLDVAAVPVLKSWTHLPVWIDPSHPAGKRDWVIPLALAGLAAGADGLIVETHPEPEKALSDAAQQLHEHEF AELMDKVRRLVAALDKTLAAPVLG
Specific function: Catalyzes the condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]
COG id: COG2876
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I DAHP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1787466, Length=230, Percent_Identity=30, Blast_Score=88, Evalue=7e-19,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006218 - InterPro: IPR006268 [H]
Pfam domain/function: PF00793 DAHP_synth_1 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 37449; Mature: 37449
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIVMKRGYTEEELQEVVREIEKVGYRPHVSRGVETTLVGAIGRGPTPELMEHFRALPGV CEEEEECCCCHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHCCCCCCHHHHHHHHHCCCH AEVIPISKPWKLASLEVQPFPTVLEFPTGKTGGGHVMVAAGPCGVESREQTLRAAHYVKA HHHCCCCCCCEEEEEEECCCCCEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH HGAHMLRGGAFKPRTSPYAFQGLGLEGLKILAEAKRETGLPIVTEVLSPEQVELVAEYAD CCCHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHH VLQIGARNAQNFPLLQAVGEAGKPVLLKRGMSMTLEEFLMSAEYILSRGNMRVILVERGI HHHHHCCCCCCCHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCH RTFEKATRFTLDVAAVPVLKSWTHLPVWIDPSHPAGKRDWVIPLALAGLAAGADGLIVET HHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEEC HPEPEKALSDAAQQLHEHEFAELMDKVRRLVAALDKTLAAPVLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLIVMKRGYTEEELQEVVREIEKVGYRPHVSRGVETTLVGAIGRGPTPELMEHFRALPGV CEEEEECCCCHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHCCCCCCHHHHHHHHHCCCH AEVIPISKPWKLASLEVQPFPTVLEFPTGKTGGGHVMVAAGPCGVESREQTLRAAHYVKA HHHCCCCCCCEEEEEEECCCCCEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH HGAHMLRGGAFKPRTSPYAFQGLGLEGLKILAEAKRETGLPIVTEVLSPEQVELVAEYAD CCCHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHH VLQIGARNAQNFPLLQAVGEAGKPVLLKRGMSMTLEEFLMSAEYILSRGNMRVILVERGI HHHHHCCCCCCCHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCH RTFEKATRFTLDVAAVPVLKSWTHLPVWIDPSHPAGKRDWVIPLALAGLAAGADGLIVET HHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEEC HPEPEKALSDAAQQLHEHEFAELMDKVRRLVAALDKTLAAPVLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571; 12743122 [H]