| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is tyrA [H]
Identifier: 55980768
GI number: 55980768
Start: 763907
End: 764986
Strand: Reverse
Name: tyrA [H]
Synonym: TTHA0799
Alternate gene names: 55980768
Gene position: 764986-763907 (Counterclockwise)
Preceding gene: 55980769
Following gene: 55980764
Centisome position: 41.36
GC content: 71.67
Gene sequence:
>1080_bases ATGAAGCCCCTCTTCGGCAAAGTCGGGGTCTTCGGCGTGGGCCTTCTGGGCGGGAGCGTGGCCCTGGGGATTAAGGAGCG CTTCCTCGCCGAGGAGGTCCACGCCTACGATCAGGACCCTATGGCCCTGGAGAAGGTCCTCTTTCTCGGCGTGGCCGACC GGGTGCACACCGAGGTGGGCCCCTGGGTGGGGGAGCTTGACCTGGGGATCCTCGCGGCCCCCGTGGGGGCGCTGGCCGAG CTGGGGAAGGCCCTCGCCCCCTGGGCCCACCCGGAGAGCCTCTGGACCGACGTGGGAAGCGTCAAGGCCAAGGTGGTGGC CGCCCTGGAAGGCCTCCTCCCCCACTACCTGGGGGGGCACCCCATGGCGGGAAGCGAACGGGCCGGGGTGGAAAACGCCC ACGCCGGGCTCCTGCAAAACGCCGTCTGGGTCCTGACCCCCACGGAAAGGACAAGCCCCAGGGCCCGGGAGGGCGTGCGG GGGCTCGTGGAGGCCCTGGGGGCCTACCCCCTGGAGATGCCCCCGGGGCGCCACGACGAGCTCGTGGCCCGGGTCTCCCA CCTCCCCTACCTCCTCGCCGTGGCCCTAAACCGCATGGTGGCGCAAAGCCCCCACCGGGACCTCCTCATGTTCCTGGCGG CGGGGGGCTTCCGCGACCTCACCCGGGTGGCCTCCGGCTCCCCCAGGATGAGCCGGGACATGGTGGTGGAGAACAAGGAG GCCCTGAAGGAGGCCATAGAGGAGCTCCGGGAGGTCCTCCTGGAGCTGGAAGGCCTCCTGGACGAGCCCGAAGGGTTGCT TCGGGCGGCGGAGGAGGCCAAGCGCACCCGGGACAGCCTCCCCATCGTGCGCCGAAGCCTCCTCCCCGAGATGCACGACC TCGTGGTCCAGGTGCCGGACCGGCCCGGGGAGATCGCCAGGATCGCCACCGCCTTGGGCGAGGCGGGGGTGAACATCAAG GACATAGAGGTCCTCACCATCCGGGAGGCGGCGGGGGCCCTCCGCCTCTCCTTCGCCACCCGGGAGGAGCGGGAAAGGGC CCGGCGCGTCCTCCAGGAGGCGGGCTACCGCCTGCCCTGA
Upstream 100 bases:
>100_bases CCGCCCAGCAGCTCCACGAGCACGAGTTCGCCGAGCTCATGGACAAGGTGCGCCGCCTGGTGGCCGCCCTGGACAAGACC CTCGCCGCCCCCGTCCTGGG
Downstream 100 bases:
>100_bases GGCGGGGCGAGGACCACCCGGCCCTTCCCCAGAGCCTTGGCCCGGTAGAGGGCCTGGTCGGCCCGGAGGAAGAGGTCCTC GAGGTCCCCCGCGTACACGG
Product: prephenate dehydrogenase
Products: NA
Alternate protein names: PDH [H]
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MKPLFGKVGVFGVGLLGGSVALGIKERFLAEEVHAYDQDPMALEKVLFLGVADRVHTEVGPWVGELDLGILAAPVGALAE LGKALAPWAHPESLWTDVGSVKAKVVAALEGLLPHYLGGHPMAGSERAGVENAHAGLLQNAVWVLTPTERTSPRAREGVR GLVEALGAYPLEMPPGRHDELVARVSHLPYLLAVALNRMVAQSPHRDLLMFLAAGGFRDLTRVASGSPRMSRDMVVENKE ALKEAIEELREVLLELEGLLDEPEGLLRAAEEAKRTRDSLPIVRRSLLPEMHDLVVQVPDRPGEIARIATALGEAGVNIK DIEVLTIREAAGALRLSFATREERERARRVLQEAGYRLP
Sequences:
>Translated_359_residues MKPLFGKVGVFGVGLLGGSVALGIKERFLAEEVHAYDQDPMALEKVLFLGVADRVHTEVGPWVGELDLGILAAPVGALAE LGKALAPWAHPESLWTDVGSVKAKVVAALEGLLPHYLGGHPMAGSERAGVENAHAGLLQNAVWVLTPTERTSPRAREGVR GLVEALGAYPLEMPPGRHDELVARVSHLPYLLAVALNRMVAQSPHRDLLMFLAAGGFRDLTRVASGSPRMSRDMVVENKE ALKEAIEELREVLLELEGLLDEPEGLLRAAEEAKRTRDSLPIVRRSLLPEMHDLVVQVPDRPGEIARIATALGEAGVNIK DIEVLTIREAAGALRLSFATREERERARRVLQEAGYRLP >Mature_359_residues MKPLFGKVGVFGVGLLGGSVALGIKERFLAEEVHAYDQDPMALEKVLFLGVADRVHTEVGPWVGELDLGILAAPVGALAE LGKALAPWAHPESLWTDVGSVKAKVVAALEGLLPHYLGGHPMAGSERAGVENAHAGLLQNAVWVLTPTERTSPRAREGVR GLVEALGAYPLEMPPGRHDELVARVSHLPYLLAVALNRMVAQSPHRDLLMFLAAGGFRDLTRVASGSPRMSRDMVVENKE ALKEAIEELREVLLELEGLLDEPEGLLRAAEEAKRTRDSLPIVRRSLLPEMHDLVVQVPDRPGEIARIATALGEAGVNIK DIEVLTIREAAGALRLSFATREERERARRVLQEAGYRLP
Specific function: Unknown
COG id: COG0287
COG function: function code E; Prephenate dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR002912 - InterPro: IPR016040 - InterPro: IPR003099 [H]
Pfam domain/function: PF01842 ACT; PF02153 PDH [H]
EC number: =1.3.1.12 [H]
Molecular weight: Translated: 38917; Mature: 38917
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPLFGKVGVFGVGLLGGSVALGIKERFLAEEVHAYDQDPMALEKVLFLGVADRVHTEVG CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC PWVGELDLGILAAPVGALAELGKALAPWAHPESLWTDVGSVKAKVVAALEGLLPHYLGGH CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PMAGSERAGVENAHAGLLQNAVWVLTPTERTSPRAREGVRGLVEALGAYPLEMPPGRHDE CCCCCCCCCCCHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHH LVARVSHLPYLLAVALNRMVAQSPHRDLLMFLAAGGFRDLTRVASGSPRMSRDMVVENKE HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHCCHH ALKEAIEELREVLLELEGLLDEPEGLLRAAEEAKRTRDSLPIVRRSLLPEMHDLVVQVPD HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHEECCC RPGEIARIATALGEAGVNIKDIEVLTIREAAGALRLSFATREERERARRVLQEAGYRLP CCHHHHHHHHHHHHCCCCEEEEEEEEEHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKPLFGKVGVFGVGLLGGSVALGIKERFLAEEVHAYDQDPMALEKVLFLGVADRVHTEVG CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC PWVGELDLGILAAPVGALAELGKALAPWAHPESLWTDVGSVKAKVVAALEGLLPHYLGGH CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PMAGSERAGVENAHAGLLQNAVWVLTPTERTSPRAREGVRGLVEALGAYPLEMPPGRHDE CCCCCCCCCCCHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHH LVARVSHLPYLLAVALNRMVAQSPHRDLLMFLAAGGFRDLTRVASGSPRMSRDMVVENKE HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHCCHH ALKEAIEELREVLLELEGLLDEPEGLLRAAEEAKRTRDSLPIVRRSLLPEMHDLVVQVPD HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHEECCC RPGEIARIATALGEAGVNIKDIEVLTIREAAGALRLSFATREERERARRVLQEAGYRLP CCHHHHHHHHHHHHCCCCEEEEEEEEEHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA