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The map label for this gene is nsrR [H]

Identifier: 54295371

GI number: 54295371

Start: 2798458

End: 2798889

Strand: Reverse

Name: nsrR [H]

Synonym: lpl2456

Alternate gene names: 54295371

Gene position: 2798889-2798458 (Counterclockwise)

Preceding gene: 54295374

Following gene: 54295365

Centisome position: 83.66

GC content: 37.73

Gene sequence:

>432_bases
ATGCAATTGACTCAATTTACTGATTATTCCTTACGCGCCTTGATCTATATTGCCCTAAAGAAAGGTTCATGTACCATTAA
GGACATTACAGACGCCTATTCCATATCAAACAATCATCTCATCAAAATTATTCATAATTTATCGAAGATGGGTTTAATTA
AAACAATACGAGGGAAACATGGCGGTATTTTGATGGCAGCCTCACCTGAAACCATTAATTTAGGTCAATTGATTATGGAG
CTTGAGCCCAATTTCGATTTGGTTCCCTGTTTTAATAAAGAAAAGGCAAACTGCTGCATTGCCCCGGTATGTAAACTCAA
GAGCGTTTTGTATGAAGCGCAACGTGCTTTCCTGCAGATTTTAGAGCAGTATACTCTGGCTGATGTTTTACATAACCCAA
GTGAATTGTCTGCTTTATTGAGGATCAGTTAG

Upstream 100 bases:

>100_bases
TCAAACAATGCTTCAGTCATGATATACTCCTTAAAGATGTATTTGAAATACATCTTATAAAAAGAAATAATAGACGTCAA
CAAACCAGAAGGATTTTTTT

Downstream 100 bases:

>100_bases
CAATCCAGGGTAATATTTTATGAAAGTGATCTTTATATAACTTTCTGGGCAAGCAACAGAGCAAATAATCCTTGCACTGG
TCTTCCCAATTCATCCTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MQLTQFTDYSLRALIYIALKKGSCTIKDITDAYSISNNHLIKIIHNLSKMGLIKTIRGKHGGILMAASPETINLGQLIME
LEPNFDLVPCFNKEKANCCIAPVCKLKSVLYEAQRAFLQILEQYTLADVLHNPSELSALLRIS

Sequences:

>Translated_143_residues
MQLTQFTDYSLRALIYIALKKGSCTIKDITDAYSISNNHLIKIIHNLSKMGLIKTIRGKHGGILMAASPETINLGQLIME
LEPNFDLVPCFNKEKANCCIAPVCKLKSVLYEAQRAFLQILEQYTLADVLHNPSELSALLRIS
>Mature_143_residues
MQLTQFTDYSLRALIYIALKKGSCTIKDITDAYSISNNHLIKIIHNLSKMGLIKTIRGKHGGILMAASPETINLGQLIME
LEPNFDLVPCFNKEKANCCIAPVCKLKSVLYEAQRAFLQILEQYTLADVLHNPSELSALLRIS

Specific function: Nitric oxide-responsive transcriptional regulator [H]

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790621, Length=142, Percent_Identity=45.7746478873239, Blast_Score=120, Evalue=4e-29,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 15979; Mature: 15979

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLTQFTDYSLRALIYIALKKGSCTIKDITDAYSISNNHLIKIIHNLSKMGLIKTIRGKH
CCCCCCCCHHHEEEEEEEECCCCCEEEECHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC
GGILMAASPETINLGQLIMELEPNFDLVPCFNKEKANCCIAPVCKLKSVLYEAQRAFLQI
CCEEEECCCCEECHHHHHEEECCCCCEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHH
LEQYTLADVLHNPSELSALLRIS
HHHHHHHHHHCCHHHHHHHHCCC
>Mature Secondary Structure
MQLTQFTDYSLRALIYIALKKGSCTIKDITDAYSISNNHLIKIIHNLSKMGLIKTIRGKH
CCCCCCCCHHHEEEEEEEECCCCCEEEECHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC
GGILMAASPETINLGQLIMELEPNFDLVPCFNKEKANCCIAPVCKLKSVLYEAQRAFLQI
CCEEEECCCCEECHHHHHEEECCCCCEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHH
LEQYTLADVLHNPSELSALLRIS
HHHHHHHHHHCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA