Click here to switch to the map view.

The map label for this gene is 54295365

Identifier: 54295365

GI number: 54295365

Start: 2793334

End: 2793585

Strand: Reverse

Name: 54295365

Synonym: lpl2450

Alternate gene names: NA

Gene position: 2793585-2793334 (Counterclockwise)

Preceding gene: 54295371

Following gene: 54295364

Centisome position: 83.5

GC content: 34.52

Gene sequence:

>252_bases
GTGTCAATATGTTGGGATTTAATCATAAATCATAATACCCTGCTGCAAACCAATTTCACTGGTCACCGGGTTCAAATGAA
TGACTCCGAATCCACCCCTAAAGGAATTCTTTTCGTATCAAATAAACTATTTATCGATTTACTCACTTATATCACTGAGT
ATCAGTCCATTACCAGAAAAGAACTCATGAATCTTTCAAATAATGAAATCAAACCAAGGAGGAAAAGCAATAAGAGACTA
TTAATGTGGTGA

Upstream 100 bases:

>100_bases
TCGAACTCACTGATCGGAAAATGAGATCAAAGTATTGCGTGAATCATTTTGATCGTATACATTGCATTTTATATCAAATA
AAAACTAAGGGATTAATGTT

Downstream 100 bases:

>100_bases
GGGTTTTGAATTTACAAAAAGGAGTCAATATGTTTAATGTGGATAATAGTGGTAAAGGCAATTGCTTGTATTATGCTTAC
AGTATTTCATTAATGTATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 82

Protein sequence:

>83_residues
MSICWDLIINHNTLLQTNFTGHRVQMNDSESTPKGILFVSNKLFIDLLTYITEYQSITRKELMNLSNNEIKPRRKSNKRL
LMW

Sequences:

>Translated_83_residues
MSICWDLIINHNTLLQTNFTGHRVQMNDSESTPKGILFVSNKLFIDLLTYITEYQSITRKELMNLSNNEIKPRRKSNKRL
LMW
>Mature_82_residues
SICWDLIINHNTLLQTNFTGHRVQMNDSESTPKGILFVSNKLFIDLLTYITEYQSITRKELMNLSNNEIKPRRKSNKRLL
MW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9858; Mature: 9726

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSICWDLIINHNTLLQTNFTGHRVQMNDSESTPKGILFVSNKLFIDLLTYITEYQSITRK
CCEEEEEEECCCEEEEECCCCCEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH
ELMNLSNNEIKPRRKSNKRLLMW
HHHCCCCCCCCCCCCCCCEEECC
>Mature Secondary Structure 
SICWDLIINHNTLLQTNFTGHRVQMNDSESTPKGILFVSNKLFIDLLTYITEYQSITRK
CEEEEEEECCCEEEEECCCCCEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH
ELMNLSNNEIKPRRKSNKRLLMW
HHHCCCCCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA