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The map label for this gene is 54295204

Identifier: 54295204

GI number: 54295204

Start: 2604936

End: 2605313

Strand: Reverse

Name: 54295204

Synonym: lpl2286

Alternate gene names: NA

Gene position: 2605313-2604936 (Counterclockwise)

Preceding gene: 54295205

Following gene: 54295199

Centisome position: 77.87

GC content: 47.09

Gene sequence:

>378_bases
ATGGCAAAATCAGGTCAGCGCATTAACGCAGGTCAGGAAATCAGGCTTGCAGACATTGAAGCAGATGCAGGCTGTCAGAA
GGGGATCTTTGAAACGATCTATGATCAGCTAAGCCCAGCCAGCATGGCATTATCGCTTAAGAAATACAGCAGTCGATATC
ATGGCGCAATTGGTCTGGCGTGGTTAAATCAAGTAGTTGCCAACCGACAAACAATCAGCCGATATCTTACTGACAACATT
CAAACCTTTGTTGATGCGGTCATTCAACCCGATGCAACAGGGCAGATTATCCGTGTTGCCAGACGCTTTGCGCTGGTTGC
TGCTGCCGTGTCCTTATTGAGACATAGGTTACACTCAAAGGCATTTCTGGAGAAGTGA

Upstream 100 bases:

>100_bases
TCAGGGAAAAACACGCGCCTCTCGTACTGGCACAATCAGGCAATCCTCCCGATGGTCGCTATTTTTCTTATCTGCTGGTG
AAGAGTCTTTGACAGCACTC

Downstream 100 bases:

>100_bases
AATGCCATGGCAGGAGTGTAGTAAAGTGGATGAAAAGCTAAAATTTGTAGCAAGATTATTAGATGGCGAACAAATGTCTT
CTTTATGTCAGGAATTCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: Inner Membrane

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MAKSGQRINAGQEIRLADIEADAGCQKGIFETIYDQLSPASMALSLKKYSSRYHGAIGLAWLNQVVANRQTISRYLTDNI
QTFVDAVIQPDATGQIIRVARRFALVAAAVSLLRHRLHSKAFLEK

Sequences:

>Translated_125_residues
MAKSGQRINAGQEIRLADIEADAGCQKGIFETIYDQLSPASMALSLKKYSSRYHGAIGLAWLNQVVANRQTISRYLTDNI
QTFVDAVIQPDATGQIIRVARRFALVAAAVSLLRHRLHSKAFLEK
>Mature_124_residues
AKSGQRINAGQEIRLADIEADAGCQKGIFETIYDQLSPASMALSLKKYSSRYHGAIGLAWLNQVVANRQTISRYLTDNIQ
TFVDAVIQPDATGQIIRVARRFALVAAAVSLLRHRLHSKAFLEK

Specific function: Unknown

COG id: COG5519

COG function: function code L; Superfamily II helicase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13829; Mature: 13698

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKSGQRINAGQEIRLADIEADAGCQKGIFETIYDQLSPASMALSLKKYSSRYHGAIGLA
CCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHH
WLNQVVANRQTISRYLTDNIQTFVDAVIQPDATGQIIRVARRFALVAAAVSLLRHRLHSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFLEK
HHCCC
>Mature Secondary Structure 
AKSGQRINAGQEIRLADIEADAGCQKGIFETIYDQLSPASMALSLKKYSSRYHGAIGLA
CCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHH
WLNQVVANRQTISRYLTDNIQTFVDAVIQPDATGQIIRVARRFALVAAAVSLLRHRLHSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFLEK
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA