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The map label for this gene is yajC [H]

Identifier: 54294899

GI number: 54294899

Start: 2219517

End: 2219852

Strand: Reverse

Name: yajC [H]

Synonym: lpl1978

Alternate gene names: 54294899

Gene position: 2219852-2219517 (Counterclockwise)

Preceding gene: 54294900

Following gene: 54294898

Centisome position: 66.35

GC content: 37.2

Gene sequence:

>336_bases
ATGAGTTTTTTTATTAGTGATGCATTAGCTGCAGCAGGAAATGCGCCAGCTGCTCAAACTGATGGAACTTTTTCACTGAT
TATGATCGTTGCGATTTTTGTCTTGTTTTATTTTATGATAATAAGGCCGCAAAGCAAAAGAGCCAAAGAGCATAGAGAAT
TGATAAATCGCTTAAAAAAGGGGGATGAAATAGTAACATCCGGAGGGATTTTGGCAAAAGTTGTGAGCCTGGATGATCAA
TACATCAAAGTAAGCCCAGCAGAAGGTATAGAAATTAATTTGCAAAAAGGCGCAGTTACTGCAGTATTACCAAAAGGCAC
AATCAAATCACTTTAA

Upstream 100 bases:

>100_bases
GTAATCCATACAAGAGTTCTTAGAACTATCTTTTGAAATTGGTTTATCGACCACCTTCGAAAGAAAACCAGGAAATTAAT
ACCCGATTTGAGGAGATTTT

Downstream 100 bases:

>100_bases
GTTAGGCGTAGGGAATCAGAAATGCAAAATAAATATCCTCTATGGAAAAATCTAATGCTGATAGTGATTGCAGTCATTGG
ATTTGTTTACGCTATACCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MSFFISDALAAAGNAPAAQTDGTFSLIMIVAIFVLFYFMIIRPQSKRAKEHRELINRLKKGDEIVTSGGILAKVVSLDDQ
YIKVSPAEGIEINLQKGAVTAVLPKGTIKSL

Sequences:

>Translated_111_residues
MSFFISDALAAAGNAPAAQTDGTFSLIMIVAIFVLFYFMIIRPQSKRAKEHRELINRLKKGDEIVTSGGILAKVVSLDDQ
YIKVSPAEGIEINLQKGAVTAVLPKGTIKSL
>Mature_110_residues
SFFISDALAAAGNAPAAQTDGTFSLIMIVAIFVLFYFMIIRPQSKRAKEHRELINRLKKGDEIVTSGGILAKVVSLDDQY
IKVSPAEGIEINLQKGAVTAVLPKGTIKSL

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=113, Percent_Identity=46.9026548672566, Blast_Score=103, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 11979; Mature: 11848

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFFISDALAAAGNAPAAQTDGTFSLIMIVAIFVLFYFMIIRPQSKRAKEHRELINRLKK
CCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
GDEIVTSGGILAKVVSLDDQYIKVSPAEGIEINLQKGAVTAVLPKGTIKSL
CCEEEECCCHHHHHCCCCCCEEEECCCCCEEEEECCCCEEEEECCCCCCCC
>Mature Secondary Structure 
SFFISDALAAAGNAPAAQTDGTFSLIMIVAIFVLFYFMIIRPQSKRAKEHRELINRLKK
CCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
GDEIVTSGGILAKVVSLDDQYIKVSPAEGIEINLQKGAVTAVLPKGTIKSL
CCEEEECCCHHHHHCCCCCCEEEECCCCCEEEEECCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]