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The map label for this gene is 54294889

Identifier: 54294889

GI number: 54294889

Start: 2209984

End: 2210484

Strand: Reverse

Name: 54294889

Synonym: lpl1968

Alternate gene names: NA

Gene position: 2210484-2209984 (Counterclockwise)

Preceding gene: 54294891

Following gene: 54294888

Centisome position: 66.07

GC content: 40.52

Gene sequence:

>501_bases
ATGACAAAAGAAAAATCTGAATCAGGAAATTCACCATCAAATTCAGAAGAACATGGTACTTTAGGCCCGGATGTTTATGA
GAATGCAAGAAAGCTAAATATTCAATTGGCAACAAGAGGGCCTGCCATACTGTATGCATTAGGTAAAGCCAGTGAGCAAG
TAACTAATGGAAATGTTGTAACGGCGGTGGGTGGCATGGTTGTTGGGGCGATAGGTTTTTTTGGTAATCGTTTTTATCGA
AACAAGGGTGATGATTCCGCGTATACTTATATGGGACAAATTGTTGGTGCGGTGCAATTTACTGCCGGATTCACACTGTT
GGCATTACAGGCATTTGAGGCGTTTACAGATACTGGAGAGACAAGTCCCTTACTCAATGTTGTTAAACTAAGCGGGGTTG
CGTTAACATTAACCGAGAGCGCTTTAATTTTAATCAACTCGTATTTATATGGGGATGGATCAGCCAAAACAACATCAATA
ACAAGCCCTAAGATTGATTGA

Upstream 100 bases:

>100_bases
AGGGCTGATTATGTCAAACAATAAGGCAAGGCCGTGGATATAATCTGAGAAATTGAAAGGATACTGTCTTACCCGGAATT
TTGTTAAACAGGAGTTGATA

Downstream 100 bases:

>100_bases
ATACAATAAAAAGGCTAGTAGGGTTGAGGTATAGGGCAGCTCAAATCAATGACTTTGATTTTACAATAAGGGACTATTTA
TGACTTATTCTTTTTCCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MTKEKSESGNSPSNSEEHGTLGPDVYENARKLNIQLATRGPAILYALGKASEQVTNGNVVTAVGGMVVGAIGFFGNRFYR
NKGDDSAYTYMGQIVGAVQFTAGFTLLALQAFEAFTDTGETSPLLNVVKLSGVALTLTESALILINSYLYGDGSAKTTSI
TSPKID

Sequences:

>Translated_166_residues
MTKEKSESGNSPSNSEEHGTLGPDVYENARKLNIQLATRGPAILYALGKASEQVTNGNVVTAVGGMVVGAIGFFGNRFYR
NKGDDSAYTYMGQIVGAVQFTAGFTLLALQAFEAFTDTGETSPLLNVVKLSGVALTLTESALILINSYLYGDGSAKTTSI
TSPKID
>Mature_165_residues
TKEKSESGNSPSNSEEHGTLGPDVYENARKLNIQLATRGPAILYALGKASEQVTNGNVVTAVGGMVVGAIGFFGNRFYRN
KGDDSAYTYMGQIVGAVQFTAGFTLLALQAFEAFTDTGETSPLLNVVKLSGVALTLTESALILINSYLYGDGSAKTTSIT
SPKID

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17455; Mature: 17324

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKEKSESGNSPSNSEEHGTLGPDVYENARKLNIQLATRGPAILYALGKASEQVTNGNVV
CCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEEEEECCCCEEEEEECCCCCHHCCCCEE
TAVGGMVVGAIGFFGNRFYRNKGDDSAYTYMGQIVGAVQFTAGFTLLALQAFEAFTDTGE
EEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TSPLLNVVKLSGVALTLTESALILINSYLYGDGSAKTTSITSPKID
CCHHHHHHHHCCEEEEECCCEEEEEEEEEECCCCCCEEECCCCCCC
>Mature Secondary Structure 
TKEKSESGNSPSNSEEHGTLGPDVYENARKLNIQLATRGPAILYALGKASEQVTNGNVV
CCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEEEEECCCCEEEEEECCCCCHHCCCCEE
TAVGGMVVGAIGFFGNRFYRNKGDDSAYTYMGQIVGAVQFTAGFTLLALQAFEAFTDTGE
EEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TSPLLNVVKLSGVALTLTESALILINSYLYGDGSAKTTSITSPKID
CCHHHHHHHHCCEEEEECCCEEEEEEEEEECCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA