Click here to switch to the map view.

The map label for this gene is osmC [C]

Identifier: 54294870

GI number: 54294870

Start: 2187318

End: 2187737

Strand: Reverse

Name: osmC [C]

Synonym: lpl1949

Alternate gene names: 54294870

Gene position: 2187737-2187318 (Counterclockwise)

Preceding gene: 54294871

Following gene: 54294869

Centisome position: 65.39

GC content: 43.1

Gene sequence:

>420_bases
ATGAAAGCATTGTATACAACAATTGCCAAGACCCATGGTGGACGAAACGGCCATGTAGAAACTACAGATGGGCTATTAAA
ACTTGATTTGGCAATGCCGAGAGAGCTAGGGGGGGAGGGTGGTGCCACTAATCCAGAGCAATTATTTGCCGCGGGATATG
CTGCTTGTTTTGAGAGTGCCATTCGTCATGTTGCCAATATGCAAAAAATTTCTTTAGAGGATGTTTCCATGACTTCCGAG
GTCTCTTTATATGCTACCCCAGAGAAGGGTTTTAAACTTGGAGTTGCTTTACACGCCTATATAACAGGCCTAAATCAGAA
TGAGGCCGAAGCATTAGTTGCAAAAGCGCATGAGGTTTGTCCTTATTCCAATGCAATACGTGGTAATGTTGAAGTGAAAT
TGAGTGTTAGTGTCAAGTGA

Upstream 100 bases:

>100_bases
CACGAATTAAAGTTCGGCATGAAATTTCTTCCTTTCTGTTTGACAAACAGCAAAATACTAAATAATTTTAATTTCTTACC
ATTTTAAGGAATATAAAATT

Downstream 100 bases:

>100_bases
TAGATAACTTCCATCAATTAAATAAGGATATCTTAATGTATACACTTTATTCATTCGGGACGCCCAACGGATTTAAACCC
ACTATTATGTTGGAAGAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MKALYTTIAKTHGGRNGHVETTDGLLKLDLAMPRELGGEGGATNPEQLFAAGYAACFESAIRHVANMQKISLEDVSMTSE
VSLYATPEKGFKLGVALHAYITGLNQNEAEALVAKAHEVCPYSNAIRGNVEVKLSVSVK

Sequences:

>Translated_139_residues
MKALYTTIAKTHGGRNGHVETTDGLLKLDLAMPRELGGEGGATNPEQLFAAGYAACFESAIRHVANMQKISLEDVSMTSE
VSLYATPEKGFKLGVALHAYITGLNQNEAEALVAKAHEVCPYSNAIRGNVEVKLSVSVK
>Mature_139_residues
MKALYTTIAKTHGGRNGHVETTDGLLKLDLAMPRELGGEGGATNPEQLFAAGYAACFESAIRHVANMQKISLEDVSMTSE
VSLYATPEKGFKLGVALHAYITGLNQNEAEALVAKAHEVCPYSNAIRGNVEVKLSVSVK

Specific function: Unknown

COG id: COG1764

COG function: function code O; Predicted redox protein, regulator of disulfide bond formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the osmC/ohr family [H]

Homologues:

None

Paralogues:

None

Copy number: 3180 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015946
- InterPro:   IPR019953
- InterPro:   IPR003718 [H]

Pfam domain/function: PF02566 OsmC [H]

EC number: NA

Molecular weight: Translated: 14805; Mature: 14805

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALYTTIAKTHGGRNGHVETTDGLLKLDLAMPRELGGEGGATNPEQLFAAGYAACFESA
CCHHHHHHHHHCCCCCCCEECCCCEEEEEECCCHHCCCCCCCCCHHHHHHHHHHHHHHHH
IRHVANMQKISLEDVSMTSEVSLYATPEKGFKLGVALHAYITGLNQNEAEALVAKAHEVC
HHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEHHHEEEEEEECCCCCHHHHHHHHHHHCC
PYSNAIRGNVEVKLSVSVK
CCCCCCCCCEEEEEEEEEC
>Mature Secondary Structure
MKALYTTIAKTHGGRNGHVETTDGLLKLDLAMPRELGGEGGATNPEQLFAAGYAACFESA
CCHHHHHHHHHCCCCCCCEECCCCEEEEEECCCHHCCCCCCCCCHHHHHHHHHHHHHHHH
IRHVANMQKISLEDVSMTSEVSLYATPEKGFKLGVALHAYITGLNQNEAEALVAKAHEVC
HHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEHHHEEEEEEECCCCCHHHHHHHHHHHCC
PYSNAIRGNVEVKLSVSVK
CCCCCCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9226277 [H]