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The map label for this gene is fdxA [H]

Identifier: 54294810

GI number: 54294810

Start: 2112604

End: 2112939

Strand: Reverse

Name: fdxA [H]

Synonym: lpl1887

Alternate gene names: 54294810

Gene position: 2112939-2112604 (Counterclockwise)

Preceding gene: 54294817

Following gene: 54294809

Centisome position: 63.15

GC content: 38.39

Gene sequence:

>336_bases
ATGACTTTTGTAGTAACGGAAAGTTGTATACGATGCAAGTATACCGATTGTGTAGAAGTATGCCCTGTAGATTGTTTTTA
TGAGGGGCCTAATTTCCTGGTGATTCACCCTGATGAATGCATCGATTGTGCCCTTTGTGAACCTGAATGTCCAGTTAATG
CGATCGTTTCAGAAGACGATTTAACAGAGGAACAACAGCAATTTAAAGAATTAAATGCCGAGTTATCCAAAACCTGGCCT
AATATTACTGCTAAAAAGGATGCTCCTTCTGATGCCAAGGATTGGGAAGAAGTAAAGGACAAACTTCAATATTTGCAAAA
AGAGTGGAAGAAATAA

Upstream 100 bases:

>100_bases
GAGTCCAGGTGGTATAAAAATATCAGGCTCCTCTATCATCAGCAGGGTATTTTATGCTTTAATATGAGTCATTTCTTAAA
GATAATTTTTAAGGTTTGCT

Downstream 100 bases:

>100_bases
CCACTTTCGCTGAAACCTGTCGGCGAACTCTCAGTGAGAAAGGAAGATTATCAACTGCTATTCCAGGCTTTGTGGCAAGA
GCACCACAAGCCGATTTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Ferredoxin I; FdI [H]

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MTFVVTESCIRCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPVNAIVSEDDLTEEQQQFKELNAELSKTWP
NITAKKDAPSDAKDWEEVKDKLQYLQKEWKK

Sequences:

>Translated_111_residues
MTFVVTESCIRCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPVNAIVSEDDLTEEQQQFKELNAELSKTWP
NITAKKDAPSDAKDWEEVKDKLQYLQKEWKK
>Mature_110_residues
TFVVTESCIRCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPVNAIVSEDDLTEEQQQFKELNAELSKTWPN
ITAKKDAPSDAKDWEEVKDKLQYLQKEWKK

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. This ferredoxin could play a role in regulating gene expression by interacting directly with DNA [H]

COG id: COG1146

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR000813
- InterPro:   IPR022569 [H]

Pfam domain/function: PF11953 DUF3470 [H]

EC number: NA

Molecular weight: Translated: 12842; Mature: 12710

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.1 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
9.0 %Cys+Met (Translated Protein)
8.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFVVTESCIRCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPVNAIVSEDD
CEEEECCHHHHCCCCCHHHHCCCEEEECCCCEEEECCCCCCEEECCCCCCCCCEEECCCC
LTEEQQQFKELNAELSKTWPNITAKKDAPSDAKDWEEVKDKLQYLQKEWKK
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TFVVTESCIRCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPVNAIVSEDD
EEEECCHHHHCCCCCHHHHCCCEEEECCCCEEEECCCCCCEEECCCCCCCCCEEECCCC
LTEEQQQFKELNAELSKTWPNITAKKDAPSDAKDWEEVKDKLQYLQKEWKK
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2826477; 8244942; 6848518; 7120409; 3422475; 2926817; 9600844; 10387068; 10593945; 1855590; 2153958; 1657971; 8132582 [H]