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The map label for this gene is yfcM [C]

Identifier: 54294793

GI number: 54294793

Start: 2092541

End: 2093074

Strand: Reverse

Name: yfcM [C]

Synonym: lpl1870

Alternate gene names: 54294793

Gene position: 2093074-2092541 (Counterclockwise)

Preceding gene: 54294794

Following gene: 54294791

Centisome position: 62.56

GC content: 40.26

Gene sequence:

>534_bases
GTGCATCACGTAGAAGATCTAATTAGTATTTTTAATTATTGCTTTGAGAAGGACTACAATACCCGTCTGGTTAGAGGGGG
AGATGAGCCTATTTATCTTCCTGCAGATGATAAGAGGCCTTATCATGCGCTATTTTTCGCACATGGATTTTTTAGCAGTG
CTTTGCATGAATGCGCTCATTGGCTTATTGCCGGAGAAGAAAGAAGAAAGCTGGTCGATTTTGGCTATTGGTATGCTCCT
GATGGACGCAATAAGGAACAACAAACTCTGTTTCAGAGGGTGGAAGTGAAGCCACAGGCTTTAGAGTGGATTCTTTCTAT
GGCTGCGGGACATAAATTTAGGGTAAGTATTGATAATTTAAATGGGACTGAAGTAGACACTGAGGCCTTTAAACAGTCAA
TCTATAATCAGGTGTTTCATTATTGTACCCAGGGGTTACCACAGCGTGCACTACATTTTCGTAATGCTTTATGTGCTTTT
TACCGTCAACCTTCTCCCCTGAGAATTGATGATTTTTCAATTGATGAATTGTAA

Upstream 100 bases:

>100_bases
ATAGGTATGGAAAATGAAATAGAATTAAAATCTGCTTTGAAAAAAGAGTATAATCAGTATCAAATAGGTAAGCATCAAAG
GCTTTGCTAGGTAAAGATTC

Downstream 100 bases:

>100_bases
TGCTTCAAGCGCGGCGAAGCACGACTCCAATTGTCCAATCGAGATTTTGTTCTGGCGGAATATAATGGATGGTTTGATTG
GGGTTAATACCATAACCATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MHHVEDLISIFNYCFEKDYNTRLVRGGDEPIYLPADDKRPYHALFFAHGFFSSALHECAHWLIAGEERRKLVDFGYWYAP
DGRNKEQQTLFQRVEVKPQALEWILSMAAGHKFRVSIDNLNGTEVDTEAFKQSIYNQVFHYCTQGLPQRALHFRNALCAF
YRQPSPLRIDDFSIDEL

Sequences:

>Translated_177_residues
MHHVEDLISIFNYCFEKDYNTRLVRGGDEPIYLPADDKRPYHALFFAHGFFSSALHECAHWLIAGEERRKLVDFGYWYAP
DGRNKEQQTLFQRVEVKPQALEWILSMAAGHKFRVSIDNLNGTEVDTEAFKQSIYNQVFHYCTQGLPQRALHFRNALCAF
YRQPSPLRIDDFSIDEL
>Mature_177_residues
MHHVEDLISIFNYCFEKDYNTRLVRGGDEPIYLPADDKRPYHALFFAHGFFSSALHECAHWLIAGEERRKLVDFGYWYAP
DGRNKEQQTLFQRVEVKPQALEWILSMAAGHKFRVSIDNLNGTEVDTEAFKQSIYNQVFHYCTQGLPQRALHFRNALCAF
YRQPSPLRIDDFSIDEL

Specific function: Unknown

COG id: COG3101

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yfcM [H]

Homologues:

Organism=Escherichia coli, GI1788666, Length=165, Percent_Identity=55.1515151515151, Blast_Score=197, Evalue=4e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007411 [H]

Pfam domain/function: PF04315 DUF462 [H]

EC number: NA

Molecular weight: Translated: 20779; Mature: 20779

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHHVEDLISIFNYCFEKDYNTRLVRGGDEPIYLPADDKRPYHALFFAHGFFSSALHECAH
CCHHHHHHHHHHHHHCCCCCCEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
WLIAGEERRKLVDFGYWYAPDGRNKEQQTLFQRVEVKPQALEWILSMAAGHKFRVSIDNL
HHHCCHHHHHHHHCCCEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCC
NGTEVDTEAFKQSIYNQVFHYCTQGLPQRALHFRNALCAFYRQPSPLRIDDFSIDEL
CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCCCC
>Mature Secondary Structure
MHHVEDLISIFNYCFEKDYNTRLVRGGDEPIYLPADDKRPYHALFFAHGFFSSALHECAH
CCHHHHHHHHHHHHHCCCCCCEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
WLIAGEERRKLVDFGYWYAPDGRNKEQQTLFQRVEVKPQALEWILSMAAGHKFRVSIDNL
HHHCCHHHHHHHHCCCEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCC
NGTEVDTEAFKQSIYNQVFHYCTQGLPQRALHFRNALCAFYRQPSPLRIDDFSIDEL
CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]